RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 MAP3K9P80192 1104 aa10.74□□□□□ -0.69
XIST-201ENST00000416330 ZBED2Q9BTP6 218 aa10.74□□□□□ -0.69
XIST-201ENST00000416330 IRX2Q9BZI1 471 aaPredicted RBP10.74□□□□□ -0.69
XIST-201ENST00000416330 NCKAP5LQ9HCH0 1330 aa10.74□□□□□ -0.69
XIST-201ENST00000416330 ANO8Q9HCE9 1232 aaPredicted RBP10.72□□□□□ -0.69
XIST-201ENST00000416330 PODXL2Q9NZ53 605 aa10.71□□□□□ -0.69
XIST-201ENST00000416330 DDX27Q96GQ7 796 aaKnown RBP10.7□□□□□ -0.7
XIST-201ENST00000416330 LARP6Q9BRS8 491 aaKnown RBP10.7□□□□□ -0.7
XIST-201ENST00000416330 KDM2AQ9Y2K7 1162 aa10.7□□□□□ -0.7
XIST-201ENST00000416330 ADAM33Q9BZ11 813 aa10.69□□□□□ -0.7
XIST-201ENST00000416330 A0A0G2JS52 829 aa10.68□□□□□ -0.7
XIST-201ENST00000416330 TMEM132AQ24JP5 1023 aa10.68□□□□□ -0.7
XIST-201ENST00000416330 ANKK1Q8NFD2 765 aa10.68□□□□□ -0.7
XIST-201ENST00000416330 PPP1R3GB7ZBB8 358 aa10.64□□□□□ -0.71
XIST-201ENST00000416330 RABGEF1Q9UJ41 708 aa10.64□□□□□ -0.71
XIST-201ENST00000416330 FBXW7Q969H0 707 aa10.62□□□□□ -0.71
XIST-201ENST00000416330 MFSD10Q14728 455 aa10.61□□□□□ -0.71
XIST-201ENST00000416330 C14orf37Q86TY3 774 aa10.61□□□□□ -0.71
XIST-201ENST00000416330 TYW1BQ6NUM6 668 aa10.59□□□□□ -0.71
XIST-201ENST00000416330 NYAP1Q6ZVC0 841 aa10.59□□□□□ -0.71
XIST-201ENST00000416330 CADPS2Q86UW7 1296 aa10.59□□□□□ -0.71
XIST-201ENST00000416330 LAPTM4BQ86VI4 370 aa10.59□□□□□ -0.71
XIST-201ENST00000416330 PCDHGA10Q9Y5H3 936 aa10.58□□□□□ -0.72
XIST-201ENST00000416330 PROX2Q3B8N5 592 aa10.57□□□□□ -0.72
XIST-201ENST00000416330 PHF14O94880 888 aa10.56□□□□□ -0.72
XIST-201ENST00000416330 EMILIN3Q9NT22 766 aa10.56□□□□□ -0.72
XIST-201ENST00000416330 BCAMP50895 628 aa10.55□□□□□ -0.72
XIST-201ENST00000416330 SOWAHBA6NEL2 793 aa10.54□□□□□ -0.72
XIST-201ENST00000416330 ITGBL1O95965 494 aaPredicted RBP10.54□□□□□ -0.72
XIST-201ENST00000416330 COL9A1P20849 921 aa10.54□□□□□ -0.72
XIST-201ENST00000416330 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
XIST-201ENST00000416330 TTBK1Q5TCY1 1321 aaPredicted RBP10.54□□□□□ -0.72
XIST-201ENST00000416330 KCNC4Q03721 635 aa10.53□□□□□ -0.72
XIST-201ENST00000416330 ZFRQ96KR1 1074 aaKnown RBP10.53□□□□□ -0.72
XIST-201ENST00000416330 ONECUT3O60422 494 aaPredicted RBP10.52□□□□□ -0.73
XIST-201ENST00000416330 Q6ZNB5 142 aa10.52□□□□□ -0.73
XIST-201ENST00000416330 EPAS1Q99814 870 aa10.52□□□□□ -0.73
XIST-201ENST00000416330 C6orf132Q5T0Z8 1188 aa10.49□□□□□ -0.73
XIST-201ENST00000416330 WBP1LQ9NX94 342 aa10.48□□□□□ -0.73
XIST-201ENST00000416330 LRCH3Q96II8 777 aa10.47□□□□□ -0.73
XIST-201ENST00000416330 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.47□□□□□ -0.73
XIST-201ENST00000416330 SEPT9Q9UHD8 586 aaPredicted RBP10.47□□□□□ -0.73
XIST-201ENST00000416330 FAM98CQ17RN3 349 aaKnown RBP10.46□□□□□ -0.73
XIST-201ENST00000416330 TSR3Q9UJK0 312 aaKnown RBP10.46□□□□□ -0.73
XIST-201ENST00000416330 NPM2Q86SE8 214 aaKnown RBP10.45□□□□□ -0.74
XIST-201ENST00000416330 RBM33Q96EV2 1170 aaKnown RBP10.45□□□□□ -0.74
XIST-201ENST00000416330 TRIM6-TRIM34B2RNG4 842 aa10.44□□□□□ -0.74
XIST-201ENST00000416330 LAPTM4AQ15012 233 aa10.44□□□□□ -0.74
XIST-201ENST00000416330 HPS5Q9UPZ3 1129 aa10.44□□□□□ -0.74
XIST-201ENST00000416330 CAMK2BQ13554 666 aa10.43□□□□□ -0.74
XIST-201ENST00000416330 PACS2Q86VP3 889 aa10.43□□□□□ -0.74
XIST-201ENST00000416330 BBXQ8WY36 941 aaPredicted RBP10.43□□□□□ -0.74
XIST-201ENST00000416330 DPYSL4O14531 572 aa10.42□□□□□ -0.74
XIST-201ENST00000416330 PPP4CP60510 307 aa10.4□□□□□ -0.74
XIST-201ENST00000416330 MYT1Q01538 1121 aa10.4□□□□□ -0.74
XIST-201ENST00000416330 DDX12PQ92771 950 aa10.39□□□□□ -0.75
XIST-201ENST00000416330 SUPT5HO00267 1087 aaKnown RBP10.36□□□□□ -0.75
XIST-201ENST00000416330 MAP3K7O43318 606 aa10.36□□□□□ -0.75
XIST-201ENST00000416330 NBR1Q14596 966 aa10.35□□□□□ -0.75
XIST-201ENST00000416330 PAXIP1Q6ZW49 1069 aaPredicted RBP10.35□□□□□ -0.75
XIST-201ENST00000416330 GFRA3O60609 400 aa10.34□□□□□ -0.75
XIST-201ENST00000416330 HDGFP51858 240 aaKnown RBP10.34□□□□□ -0.75
XIST-201ENST00000416330 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.34□□□□□ -0.75
XIST-201ENST00000416330 EN1Q05925 392 aaPredicted RBP10.32□□□□□ -0.76
XIST-201ENST00000416330 SPRYD3Q8NCJ5 442 aa10.32□□□□□ -0.76
XIST-201ENST00000416330 CFAP44Q96MT7 982 aa10.32□□□□□ -0.76
XIST-201ENST00000416330 TRIM26Q12899 539 aaPredicted RBP10.3□□□□□ -0.76
XIST-201ENST00000416330 TRAF7Q6Q0C0 670 aa10.3□□□□□ -0.76
XIST-201ENST00000416330 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
XIST-201ENST00000416330 PDIA6Q15084 440 aa10.29□□□□□ -0.76
XIST-201ENST00000416330 CERKQ8TCT0 537 aa10.29□□□□□ -0.76
XIST-201ENST00000416330 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
XIST-201ENST00000416330 TSR1Q2NL82 804 aaKnown RBP10.28□□□□□ -0.76
XIST-201ENST00000416330 SAMD7Q7Z3H4 446 aa10.27□□□□□ -0.77
XIST-201ENST00000416330 CDCA7LQ96GN5 454 aa10.27□□□□□ -0.77
XIST-201ENST00000416330 PRKD2Q9BZL6 878 aa10.27□□□□□ -0.77
XIST-201ENST00000416330 IL21Q9HBE4 155 aa10.27□□□□□ -0.77
XIST-201ENST00000416330 NBPF26B4DH59 902 aa10.26□□□□□ -0.77
XIST-201ENST00000416330 RNF40O75150 1001 aa10.26□□□□□ -0.77
XIST-201ENST00000416330 PRSS12P56730 875 aa10.26□□□□□ -0.77
XIST-201ENST00000416330 TSHZ2Q9NRE2 1034 aa10.26□□□□□ -0.77
XIST-201ENST00000416330 SMAPO00193 183 aa10.24□□□□□ -0.77
XIST-201ENST00000416330 TJAP1Q5JTD0 557 aa10.24□□□□□ -0.77
XIST-201ENST00000416330 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
XIST-201ENST00000416330 PNMA3Q9UL41 463 aa10.24□□□□□ -0.77
XIST-201ENST00000416330 NRG2O14511 850 aaPredicted RBP10.23□□□□□ -0.77
XIST-201ENST00000416330 MTRQ99707 1265 aa10.23□□□□□ -0.77
XIST-201ENST00000416330 UBTFP17480 764 aaKnown RBP10.22□□□□□ -0.77
XIST-201ENST00000416330 GGCXP38435 758 aa10.22□□□□□ -0.77
XIST-201ENST00000416330 E2F4Q16254 413 aa10.22□□□□□ -0.77
XIST-201ENST00000416330 TATDN2Q93075 761 aa10.22□□□□□ -0.77
XIST-201ENST00000416330 V9GY48 417 aaPredicted RBP10.22□□□□□ -0.77
XIST-201ENST00000416330 GRXCR2A6NFK2 248 aa10.21□□□□□ -0.77
XIST-201ENST00000416330 SLC4A3P48751 1232 aa10.21□□□□□ -0.77
XIST-201ENST00000416330 PPP1R18Q6NYC8 613 aa10.21□□□□□ -0.77
XIST-201ENST00000416330 PRIM1P49642 420 aaKnown RBP10.2□□□□□ -0.78
XIST-201ENST00000416330 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.2□□□□□ -0.78
XIST-201ENST00000416330 WDR70Q9NW82 654 aa10.2□□□□□ -0.78
XIST-201ENST00000416330 HRCP23327 699 aa10.17□□□□□ -0.78
XIST-201ENST00000416330 NUDT18Q6ZVK8 323 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms