RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 TSPY10P0CW01 314 aa16.24■□□□□ 0.19
CRAMP1-203ENST00000415022 KIF15Q9NS87 1388 aa16.24■□□□□ 0.19
CRAMP1-203ENST00000415022 DUOX2Q9NRD8 1548 aa16.24■□□□□ 0.19
CRAMP1-203ENST00000415022 C3P01024 1663 aa16.24■□□□□ 0.19
CRAMP1-203ENST00000415022 EIF2AK4Q9P2K8 1649 aaKnown RBP16.23■□□□□ 0.19
CRAMP1-203ENST00000415022 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
CRAMP1-203ENST00000415022 DEPDC5O75140 1603 aa16.22■□□□□ 0.19
CRAMP1-203ENST00000415022 CEP152O94986 1710 aa16.21■□□□□ 0.19
CRAMP1-203ENST00000415022 ITGAEP38570 1179 aa16.2■□□□□ 0.18
CRAMP1-203ENST00000415022 MROH2AA6NES4 1674 aa16.18■□□□□ 0.18
CRAMP1-203ENST00000415022 KIF3BO15066 747 aa16.18■□□□□ 0.18
CRAMP1-203ENST00000415022 CEBPAP49715 358 aaPredicted RBP16.18■□□□□ 0.18
CRAMP1-203ENST00000415022 ANKRD30AQ9BXX3 1397 aa16.17■□□□□ 0.18
CRAMP1-203ENST00000415022 PRDM15P57071 1507 aaPredicted RBP16.17■□□□□ 0.18
CRAMP1-203ENST00000415022 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
CRAMP1-203ENST00000415022 VWDEQ8N2E2 1590 aa16.17■□□□□ 0.18
CRAMP1-203ENST00000415022 ROCK1Q13464 1354 aa16.16■□□□□ 0.18
CRAMP1-203ENST00000415022 GCC2Q8IWJ2 1684 aa16.16■□□□□ 0.18
CRAMP1-203ENST00000415022 GGT6Q6P531 493 aa16.16■□□□□ 0.18
CRAMP1-203ENST00000415022 ABCC3O15438 1527 aa16.15■□□□□ 0.18
CRAMP1-203ENST00000415022 PLPPR3Q6T4P5 718 aa16.15■□□□□ 0.18
CRAMP1-203ENST00000415022 CFAP65Q6ZU64 1925 aaKnown RBP16.14■□□□□ 0.17
CRAMP1-203ENST00000415022 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
CRAMP1-203ENST00000415022 UNC13BO14795 1591 aa16.13■□□□□ 0.17
CRAMP1-203ENST00000415022 NAIPQ13075 1403 aa16.13■□□□□ 0.17
CRAMP1-203ENST00000415022 KDM5DQ9BY66 1539 aa16.13■□□□□ 0.17
CRAMP1-203ENST00000415022 ANKRD50Q9ULJ7 1429 aa16.12■□□□□ 0.17
CRAMP1-203ENST00000415022 CAMSAP1Q5T5Y3 1602 aa16.12■□□□□ 0.17
CRAMP1-203ENST00000415022 ZC3H13Q5T200 1668 aaKnown RBP16.11■□□□□ 0.17
CRAMP1-203ENST00000415022 ZMYM3Q14202 1370 aa16.1■□□□□ 0.17
CRAMP1-203ENST00000415022 HFM1A2PYH4 1435 aa16.07■□□□□ 0.16
CRAMP1-203ENST00000415022 CNTLNQ9NXG0 1405 aa16.07■□□□□ 0.16
CRAMP1-203ENST00000415022 FAM135AQ9P2D6 1515 aa16.07■□□□□ 0.16
CRAMP1-203ENST00000415022 PREX1Q8TCU6 1659 aa16.06■□□□□ 0.16
CRAMP1-203ENST00000415022 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
CRAMP1-203ENST00000415022 SETD1BQ9UPS6 1966 aaKnown RBP16.06■□□□□ 0.16
CRAMP1-203ENST00000415022 IQGAP3Q86VI3 1631 aa16.05■□□□□ 0.16
CRAMP1-203ENST00000415022 LMTK2Q8IWU2 1503 aa16.05■□□□□ 0.16
CRAMP1-203ENST00000415022 PZPP20742 1482 aa16.04■□□□□ 0.16
CRAMP1-203ENST00000415022 E9PCH4 1651 aa16.04■□□□□ 0.16
CRAMP1-203ENST00000415022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.03■□□□□ 0.16
CRAMP1-203ENST00000415022 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
CRAMP1-203ENST00000415022 MYO3AQ8NEV4 1616 aa16.03■□□□□ 0.16
CRAMP1-203ENST00000415022 EFCAB6Q5THR3 1501 aa16.03■□□□□ 0.16
CRAMP1-203ENST00000415022 NPATQ14207 1427 aa16.02■□□□□ 0.16
CRAMP1-203ENST00000415022 TET3O43151 1660 aa16.02■□□□□ 0.16
CRAMP1-203ENST00000415022 WASHC2CQ9Y4E1 1318 aa16.02■□□□□ 0.16
CRAMP1-203ENST00000415022 SYNMO15061 1565 aa16■□□□□ 0.15
CRAMP1-203ENST00000415022 STRCQ7RTU9 1775 aa16■□□□□ 0.15
CRAMP1-203ENST00000415022 ZNF142P52746 1687 aaPredicted RBP16■□□□□ 0.15
CRAMP1-203ENST00000415022 IQSEC2Q5JU85 1478 aa16■□□□□ 0.15
CRAMP1-203ENST00000415022 ERVK-7P63135 1459 aa15.99■□□□□ 0.15
CRAMP1-203ENST00000415022 PTPRTO14522 1441 aa15.99■□□□□ 0.15
CRAMP1-203ENST00000415022 ARHGAP31Q2M1Z3 1444 aa15.99■□□□□ 0.15
CRAMP1-203ENST00000415022 LTBP4Q8N2S1 1624 aa15.98■□□□□ 0.15
CRAMP1-203ENST00000415022 ESF1Q9H501 851 aaKnown RBP15.96■□□□□ 0.15
CRAMP1-203ENST00000415022 NUP155O75694 1391 aa15.95■□□□□ 0.14
CRAMP1-203ENST00000415022 CEP170BQ9Y4F5 1589 aaPredicted RBP15.95■□□□□ 0.14
CRAMP1-203ENST00000415022 MYO5BQ9ULV0 1848 aa15.94■□□□□ 0.14
CRAMP1-203ENST00000415022 UGGT1Q9NYU2 1555 aa15.94■□□□□ 0.14
CRAMP1-203ENST00000415022 NOS1P29475 1434 aa15.94■□□□□ 0.14
CRAMP1-203ENST00000415022 TNRQ92752 1358 aa15.93■□□□□ 0.14
CRAMP1-203ENST00000415022 SETD5Q9C0A6 1442 aa15.93■□□□□ 0.14
CRAMP1-203ENST00000415022 UBR1Q8IWV7 1749 aa15.92■□□□□ 0.14
CRAMP1-203ENST00000415022 PIK3C2BO00750 1634 aa15.92■□□□□ 0.14
CRAMP1-203ENST00000415022 KANK1Q14678 1352 aa15.91■□□□□ 0.14
CRAMP1-203ENST00000415022 RAB3GAP2Q9H2M9 1393 aa15.91■□□□□ 0.14
CRAMP1-203ENST00000415022 SPHKAPQ2M3C7 1700 aa15.91■□□□□ 0.14
CRAMP1-203ENST00000415022 UHRF1BP1Q6BDS2 1440 aa15.9■□□□□ 0.14
CRAMP1-203ENST00000415022 A2ML1A8K2U0 1454 aa15.9■□□□□ 0.14
CRAMP1-203ENST00000415022 PLA2R1Q13018 1463 aa15.9■□□□□ 0.14
CRAMP1-203ENST00000415022 UBAP1LF5GYI3 381 aa15.89■□□□□ 0.13
CRAMP1-203ENST00000415022 RPRD2Q5VT52 1461 aaKnown RBP15.88■□□□□ 0.13
CRAMP1-203ENST00000415022 CLTCL1P53675 1640 aa15.86■□□□□ 0.13
CRAMP1-203ENST00000415022 NLRP1Q9C000 1473 aa15.85■□□□□ 0.13
CRAMP1-203ENST00000415022 NEURL4Q96JN8 1562 aa15.85■□□□□ 0.13
CRAMP1-203ENST00000415022 FOXD1Q16676 465 aa15.85■□□□□ 0.13
CRAMP1-203ENST00000415022 MED1Q15648 1581 aaPredicted RBP15.84■□□□□ 0.13
CRAMP1-203ENST00000415022 TMEM131LA2VDJ0 1609 aa15.84■□□□□ 0.13
CRAMP1-203ENST00000415022 IDI1Q13907 227 aa15.83■□□□□ 0.12
CRAMP1-203ENST00000415022 KDM5AP29375 1690 aaKnown RBP15.83■□□□□ 0.12
CRAMP1-203ENST00000415022 POLR1AO95602 1720 aaPredicted RBP15.82■□□□□ 0.12
CRAMP1-203ENST00000415022 TRIM52Q96A61 297 aa15.82■□□□□ 0.12
CRAMP1-203ENST00000415022 ADGRB3O60242 1522 aa15.81■□□□□ 0.12
CRAMP1-203ENST00000415022 PKD2Q13563 968 aa15.81■□□□□ 0.12
CRAMP1-203ENST00000415022 TRPM2O94759 1503 aa15.8■□□□□ 0.12
CRAMP1-203ENST00000415022 HSPA1LP34931 641 aa15.8■□□□□ 0.12
CRAMP1-203ENST00000415022 ARHGAP23Q9P227 1491 aa15.79■□□□□ 0.12
CRAMP1-203ENST00000415022 MPHOSPH9Q99550 1183 aa15.79■□□□□ 0.12
CRAMP1-203ENST00000415022 NCKAP5LQ9HCH0 1330 aa15.78■□□□□ 0.12
CRAMP1-203ENST00000415022 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
CRAMP1-203ENST00000415022 SLIT1O75093 1534 aa15.78■□□□□ 0.12
CRAMP1-203ENST00000415022 ZNF335Q9H4Z2 1342 aaPredicted RBP15.76■□□□□ 0.11
CRAMP1-203ENST00000415022 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
CRAMP1-203ENST00000415022 PHF23Q9BUL5 403 aaPredicted RBP15.76■□□□□ 0.11
CRAMP1-203ENST00000415022 LTKP29376 864 aa15.75■□□□□ 0.11
CRAMP1-203ENST00000415022 KIF1BO60333 1816 aa15.75■□□□□ 0.11
CRAMP1-203ENST00000415022 ZFYVE9O95405 1425 aa15.74■□□□□ 0.11
CRAMP1-203ENST00000415022 STRCP1A6NGW2 1772 aa15.73■□□□□ 0.11
CRAMP1-203ENST00000415022 HRCP23327 699 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms