RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 NCOA1Q15788 1441 aa26.1■■□□□ 1.77
SCAMP4-204ENST00000414057 CAMSAP1Q5T5Y3 1602 aa26.06■■□□□ 1.76
SCAMP4-204ENST00000414057 MYO3AQ8NEV4 1616 aa26.05■■□□□ 1.76
SCAMP4-204ENST00000414057 PZPP20742 1482 aa26.04■■□□□ 1.76
SCAMP4-204ENST00000414057 CEP170BQ9Y4F5 1589 aaPredicted RBP26.04■■□□□ 1.76
SCAMP4-204ENST00000414057 PKD2Q13563 968 aa26.03■■□□□ 1.76
SCAMP4-204ENST00000414057 FGD6Q6ZV73 1430 aa26.03■■□□□ 1.76
SCAMP4-204ENST00000414057 PLA2R1Q13018 1463 aa26.02■■□□□ 1.76
SCAMP4-204ENST00000414057 PTPN23Q9H3S7 1636 aa26.02■■□□□ 1.76
SCAMP4-204ENST00000414057 ZNF142P52746 1687 aaPredicted RBP26.02■■□□□ 1.76
SCAMP4-204ENST00000414057 TNRQ92752 1358 aa26.02■■□□□ 1.76
SCAMP4-204ENST00000414057 SHANK2Q9UPX8 1470 aa26.02■■□□□ 1.76
SCAMP4-204ENST00000414057 DUOX2Q9NRD8 1548 aa26.01■■□□□ 1.75
SCAMP4-204ENST00000414057 EIF2AK4Q9P2K8 1649 aaKnown RBP26■■□□□ 1.75
SCAMP4-204ENST00000414057 ABCC5O15440 1437 aa26■■□□□ 1.75
SCAMP4-204ENST00000414057 FBXO31Q5XUX0 539 aaPredicted RBP26■■□□□ 1.75
SCAMP4-204ENST00000414057 A2ML1A8K2U0 1454 aa26■■□□□ 1.75
SCAMP4-204ENST00000414057 TCOF1Q13428 1488 aaKnown RBP25.99■■□□□ 1.75
SCAMP4-204ENST00000414057 RNF17Q9BXT8 1623 aaKnown RBP25.98■■□□□ 1.75
SCAMP4-204ENST00000414057 KIF15Q9NS87 1388 aa25.98■■□□□ 1.75
SCAMP4-204ENST00000414057 NCKAP5LQ9HCH0 1330 aa25.98■■□□□ 1.75
SCAMP4-204ENST00000414057 DAPK1P53355 1430 aa25.96■■□□□ 1.75
SCAMP4-204ENST00000414057 RRP7BPQ9NSQ0 103 aa25.96■■□□□ 1.75
SCAMP4-204ENST00000414057 ERBINQ96RT1 1412 aa25.94■■□□□ 1.74
SCAMP4-204ENST00000414057 ZC3H13Q5T200 1668 aaKnown RBP25.94■■□□□ 1.74
SCAMP4-204ENST00000414057 DNMT1P26358 1616 aaKnown RBP25.93■■□□□ 1.74
SCAMP4-204ENST00000414057 ABCC3O15438 1527 aa25.92■■□□□ 1.74
SCAMP4-204ENST00000414057 ANKRD30AQ9BXX3 1397 aa25.92■■□□□ 1.74
SCAMP4-204ENST00000414057 NLRP1Q9C000 1473 aa25.92■■□□□ 1.74
SCAMP4-204ENST00000414057 CROCC2H7BZ55 1655 aa25.92■■□□□ 1.74
SCAMP4-204ENST00000414057 THEMISQ8N1K5 641 aaPredicted RBP25.91■■□□□ 1.74
SCAMP4-204ENST00000414057 FAM50AQ14320 339 aaKnown RBP25.87■■□□□ 1.73
SCAMP4-204ENST00000414057 CHIC2Q9UKJ5 165 aa25.87■■□□□ 1.73
SCAMP4-204ENST00000414057 KANK1Q14678 1352 aa25.86■■□□□ 1.73
SCAMP4-204ENST00000414057 ANKLE2Q86XL3 938 aa25.85■■□□□ 1.73
SCAMP4-204ENST00000414057 MROH1Q8NDA8 1641 aa25.85■■□□□ 1.73
SCAMP4-204ENST00000414057 LTBP4Q8N2S1 1624 aa25.85■■□□□ 1.73
SCAMP4-204ENST00000414057 UGGT1Q9NYU2 1555 aa25.84■■□□□ 1.73
SCAMP4-204ENST00000414057 IQSEC2Q5JU85 1478 aa25.83■■□□□ 1.73
SCAMP4-204ENST00000414057 PRDM15P57071 1507 aaPredicted RBP25.83■■□□□ 1.73
SCAMP4-204ENST00000414057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.83■■□□□ 1.73
SCAMP4-204ENST00000414057 SPATA31D1Q6ZQQ2 1576 aa25.83■■□□□ 1.73
SCAMP4-204ENST00000414057 ERVK-7P63135 1459 aa25.82■■□□□ 1.72
SCAMP4-204ENST00000414057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.81■■□□□ 1.729e-7■■■□□ 16.5
SCAMP4-204ENST00000414057 ARHGAP31Q2M1Z3 1444 aa25.81■■□□□ 1.72
SCAMP4-204ENST00000414057 ZNF335Q9H4Z2 1342 aaPredicted RBP25.8■■□□□ 1.72
SCAMP4-204ENST00000414057 ADGRL2O95490 1459 aa25.78■■□□□ 1.72
SCAMP4-204ENST00000414057 CEP152O94986 1710 aa25.77■■□□□ 1.72
SCAMP4-204ENST00000414057 DEPDC5O75140 1603 aa25.75■■□□□ 1.71
SCAMP4-204ENST00000414057 POLR1AO95602 1720 aaPredicted RBP25.74■■□□□ 1.71
SCAMP4-204ENST00000414057 TRIM26Q12899 539 aaPredicted RBP25.72■■□□□ 1.71
SCAMP4-204ENST00000414057 NEURL4Q96JN8 1562 aa25.71■■□□□ 1.71
SCAMP4-204ENST00000414057 LMTK2Q8IWU2 1503 aa25.71■■□□□ 1.71
SCAMP4-204ENST00000414057 MED14O60244 1454 aa25.7■■□□□ 1.71
SCAMP4-204ENST00000414057 ANKRD50Q9ULJ7 1429 aa25.7■■□□□ 1.7
SCAMP4-204ENST00000414057 NPHP4O75161 1426 aaPredicted RBP25.69■■□□□ 1.7
SCAMP4-204ENST00000414057 VWDEQ8N2E2 1590 aa25.66■■□□□ 1.7
SCAMP4-204ENST00000414057 STAG3Q9UJ98 1225 aa25.66■■□□□ 1.7
SCAMP4-204ENST00000414057 CPS1P31327 1500 aa25.65■■□□□ 1.7
SCAMP4-204ENST00000414057 UBAP1LF5GYI3 381 aa25.63■■□□□ 1.69
SCAMP4-204ENST00000414057 PPARGC1BQ86YN6 1023 aaKnown RBP25.63■■□□□ 1.69
SCAMP4-204ENST00000414057 EID1Q9Y6B2 187 aa25.63■■□□□ 1.69
SCAMP4-204ENST00000414057 ROCK1Q13464 1354 aa25.63■■□□□ 1.69
SCAMP4-204ENST00000414057 CFAP65Q6ZU64 1925 aaKnown RBP25.62■■□□□ 1.69
SCAMP4-204ENST00000414057 UBR1Q8IWV7 1749 aa25.61■■□□□ 1.69
SCAMP4-204ENST00000414057 TXNDC2Q86VQ3 553 aa25.6■■□□□ 1.69
SCAMP4-204ENST00000414057 SCAF11Q99590 1463 aaKnown RBP25.59■■□□□ 1.69
SCAMP4-204ENST00000414057 EFCAB6Q5THR3 1501 aa25.59■■□□□ 1.69
SCAMP4-204ENST00000414057 IQGAP1P46940 1657 aa25.59■■□□□ 1.69
SCAMP4-204ENST00000414057 SLC52A1Q9NWF4 448 aa25.59■■□□□ 1.69
SCAMP4-204ENST00000414057 SLIT1O75093 1534 aa25.58■■□□□ 1.69
SCAMP4-204ENST00000414057 IDI1Q13907 227 aa25.58■■□□□ 1.69
SCAMP4-204ENST00000414057 RPRD2Q5VT52 1461 aaKnown RBP25.58■■□□□ 1.68
SCAMP4-204ENST00000414057 ARHGAP23Q9P227 1491 aa25.58■■□□□ 1.68
SCAMP4-204ENST00000414057 NOS1P29475 1434 aa25.56■■□□□ 1.68
SCAMP4-204ENST00000414057 ITGAEP38570 1179 aa25.55■■□□□ 1.68
SCAMP4-204ENST00000414057 TMEM2Q9UHN6 1383 aa25.55■■□□□ 1.68
SCAMP4-204ENST00000414057 PIK3C2BO00750 1634 aa25.54■■□□□ 1.68
SCAMP4-204ENST00000414057 TOM1O60784 492 aa25.53■■□□□ 1.68
SCAMP4-204ENST00000414057 LTKP29376 864 aa25.53■■□□□ 1.68
SCAMP4-204ENST00000414057 PCGF6Q9BYE7 350 aa25.53■■□□□ 1.68
SCAMP4-204ENST00000414057 KDM5AP29375 1690 aaKnown RBP25.52■■□□□ 1.68
SCAMP4-204ENST00000414057 SYNMO15061 1565 aa25.49■■□□□ 1.67
SCAMP4-204ENST00000414057 UNC13BO14795 1591 aa25.49■■□□□ 1.67
SCAMP4-204ENST00000414057 TET3O43151 1660 aa25.48■■□□□ 1.67
SCAMP4-204ENST00000414057 HDGFP51858 240 aaKnown RBP25.46■■□□□ 1.67
SCAMP4-204ENST00000414057 ADGRB3O60242 1522 aa25.45■■□□□ 1.66
SCAMP4-204ENST00000414057 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
SCAMP4-204ENST00000414057 NUP155O75694 1391 aa25.44■■□□□ 1.66
SCAMP4-204ENST00000414057 PIP4K2BP78356 416 aa25.42■■□□□ 1.66
SCAMP4-204ENST00000414057 RRBP1Q9P2E9 1410 aaKnown RBP25.42■■□□□ 1.66
SCAMP4-204ENST00000414057 GCC2Q8IWJ2 1684 aa25.42■■□□□ 1.66
SCAMP4-204ENST00000414057 LRRC7Q96NW7 1537 aa25.41■■□□□ 1.66
SCAMP4-204ENST00000414057 IQGAP3Q86VI3 1631 aa25.39■■□□□ 1.66
SCAMP4-204ENST00000414057 DISP3Q9P2K9 1392 aa25.39■■□□□ 1.66
SCAMP4-204ENST00000414057 BCANQ96GW7 911 aa25.39■■□□□ 1.65
SCAMP4-204ENST00000414057 PPP1R15AO75807 674 aaPredicted RBP25.35■■□□□ 1.65
SCAMP4-204ENST00000414057 CHGAP10645 457 aaKnown RBP25.35■■□□□ 1.65
SCAMP4-204ENST00000414057 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.34■■□□□ 1.65
SCAMP4-204ENST00000414057 STRCP1A6NGW2 1772 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 288.3 ms