RNA–Protein interactions for RNA: ENST00000413644.6

CD164-204, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-204ENST00000413644 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
CD164-204ENST00000413644 DUOX2Q9NRD8 1548 aa16.74■□□□□ 0.27
CD164-204ENST00000413644 ZNF326Q5BKZ1 582 aaKnown RBP16.74■□□□□ 0.27
CD164-204ENST00000413644 POLR1AO95602 1720 aaPredicted RBP16.74■□□□□ 0.27
CD164-204ENST00000413644 ARAP3Q8WWN8 1544 aa16.73■□□□□ 0.27
CD164-204ENST00000413644 TRAPPC8Q9Y2L5 1435 aa16.72■□□□□ 0.27
CD164-204ENST00000413644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.275e-8■□□□□ 8.7
CD164-204ENST00000413644 IQGAP3Q86VI3 1631 aa16.71■□□□□ 0.27
CD164-204ENST00000413644 KIF7Q2M1P5 1343 aa16.71■□□□□ 0.27
CD164-204ENST00000413644 ERBINQ96RT1 1412 aa16.71■□□□□ 0.27
CD164-204ENST00000413644 USP47Q96K76 1375 aa16.7■□□□□ 0.26
CD164-204ENST00000413644 RALGAPBQ86X10 1494 aa16.7■□□□□ 0.26
CD164-204ENST00000413644 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
CD164-204ENST00000413644 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
CD164-204ENST00000413644 KDM5CP41229 1560 aa16.68■□□□□ 0.26
CD164-204ENST00000413644 MAGI2Q86UL8 1455 aa16.68■□□□□ 0.26
CD164-204ENST00000413644 ABCA9Q8IUA7 1624 aa16.68■□□□□ 0.26
CD164-204ENST00000413644 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
CD164-204ENST00000413644 PLA2R1Q13018 1463 aa16.67■□□□□ 0.26
CD164-204ENST00000413644 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
CD164-204ENST00000413644 KDM2AQ9Y2K7 1162 aa16.67■□□□□ 0.26
CD164-204ENST00000413644 CCDC144AA2RUR9 1427 aa16.67■□□□□ 0.26
CD164-204ENST00000413644 RTEL1-TNFRSF6BF6WH68 1400 aa16.66■□□□□ 0.26
CD164-204ENST00000413644 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
CD164-204ENST00000413644 BCORL1Q5H9F3 1711 aa16.66■□□□□ 0.26
CD164-204ENST00000413644 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
CD164-204ENST00000413644 CARD11Q9BXL7 1154 aa16.64■□□□□ 0.25
CD164-204ENST00000413644 FANCAO15360 1455 aa16.63■□□□□ 0.25
CD164-204ENST00000413644 PRKRIP1Q9H875 184 aaPredicted RBP16.63■□□□□ 0.25
CD164-204ENST00000413644 ADGRL1O94910 1474 aa16.63■□□□□ 0.25
CD164-204ENST00000413644 ZFYVE16Q7Z3T8 1539 aa16.63■□□□□ 0.25
CD164-204ENST00000413644 ATP10AO60312 1499 aa16.62■□□□□ 0.25
CD164-204ENST00000413644 ARID4BQ4LE39 1312 aaPredicted RBP16.61■□□□□ 0.25
CD164-204ENST00000413644 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
CD164-204ENST00000413644 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
CD164-204ENST00000413644 PRAG1Q86YV5 1406 aa16.59■□□□□ 0.25
CD164-204ENST00000413644 NEO1Q92859 1461 aa16.58■□□□□ 0.25
CD164-204ENST00000413644 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.24
CD164-204ENST00000413644 A2MP01023 1474 aa16.58■□□□□ 0.24
CD164-204ENST00000413644 ROCK2O75116 1388 aaKnown RBP16.58■□□□□ 0.24
CD164-204ENST00000413644 INO80Q9ULG1 1556 aaPredicted RBP16.57■□□□□ 0.24
CD164-204ENST00000413644 ATP7AQ04656 1500 aa16.57■□□□□ 0.24
CD164-204ENST00000413644 SCAPERQ9BY12 1400 aa16.57■□□□□ 0.24
CD164-204ENST00000413644 CCDC184Q52MB2 194 aa16.57■□□□□ 0.24
CD164-204ENST00000413644 ST20-MTHFSA0A0A6YYL1 179 aa16.56■□□□□ 0.24
CD164-204ENST00000413644 DHX29Q7Z478 1369 aaKnown RBP16.55■□□□□ 0.24
CD164-204ENST00000413644 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
CD164-204ENST00000413644 DEPDC5O75140 1603 aa16.55■□□□□ 0.24
CD164-204ENST00000413644 E9PCH4 1651 aa16.54■□□□□ 0.24
CD164-204ENST00000413644 CFAP74Q9C0B2 1584 aa16.54■□□□□ 0.24
CD164-204ENST00000413644 HNRNPUQ00839 825 aaKnown RBP eCLIP16.53■□□□□ 0.24
CD164-204ENST00000413644 GPRASP1Q5JY77 1395 aa16.52■□□□□ 0.23
CD164-204ENST00000413644 NBPF1Q3BBV0 1214 aa16.51■□□□□ 0.23
CD164-204ENST00000413644 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
CD164-204ENST00000413644 MYT1LQ9UL68 1186 aa16.5■□□□□ 0.23
CD164-204ENST00000413644 LAMC1P11047 1609 aa16.5■□□□□ 0.23
CD164-204ENST00000413644 VWDEQ8N2E2 1590 aa16.49■□□□□ 0.23
CD164-204ENST00000413644 EIF2AK4Q9P2K8 1649 aaKnown RBP16.49■□□□□ 0.23
CD164-204ENST00000413644 TET3O43151 1660 aa16.49■□□□□ 0.23
CD164-204ENST00000413644 TRPM2O94759 1503 aa16.49■□□□□ 0.23
CD164-204ENST00000413644 PTPRTO14522 1441 aa16.49■□□□□ 0.23
CD164-204ENST00000413644 KANK1Q14678 1352 aa16.49■□□□□ 0.23
CD164-204ENST00000413644 KIF3BO15066 747 aa16.48■□□□□ 0.23
CD164-204ENST00000413644 SPHKAPQ2M3C7 1700 aa16.48■□□□□ 0.23
CD164-204ENST00000413644 KIDINS220Q9ULH0 1771 aa16.47■□□□□ 0.23
CD164-204ENST00000413644 FRMPD1Q5SYB0 1578 aa16.47■□□□□ 0.23
CD164-204ENST00000413644 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
CD164-204ENST00000413644 PRDM15P57071 1507 aaPredicted RBP16.47■□□□□ 0.23
CD164-204ENST00000413644 ZNF518AQ6AHZ1 1483 aa16.46■□□□□ 0.23
CD164-204ENST00000413644 CEP152O94986 1710 aa16.45■□□□□ 0.22
CD164-204ENST00000413644 MROH1Q8NDA8 1641 aa16.45■□□□□ 0.22
CD164-204ENST00000413644 FKBP8Q14318 412 aa16.45■□□□□ 0.22
CD164-204ENST00000413644 CLTCL1P53675 1640 aa16.44■□□□□ 0.22
CD164-204ENST00000413644 RICTORQ6R327 1708 aa16.44■□□□□ 0.22
CD164-204ENST00000413644 ADAMTSL3P82987 1691 aa16.42■□□□□ 0.22
CD164-204ENST00000413644 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
CD164-204ENST00000413644 RNF17Q9BXT8 1623 aaKnown RBP16.42■□□□□ 0.22
CD164-204ENST00000413644 ZMYM4Q5VZL5 1548 aa16.42■□□□□ 0.22
CD164-204ENST00000413644 ARHGEF40Q8TER5 1519 aa16.42■□□□□ 0.22
CD164-204ENST00000413644 MADDQ8WXG6 1647 aa16.41■□□□□ 0.22
CD164-204ENST00000413644 NEFLP07196 543 aa16.41■□□□□ 0.22
CD164-204ENST00000413644 TESK2Q96S53 571 aa16.41■□□□□ 0.22
CD164-204ENST00000413644 STAC3Q96MF2 364 aa16.4■□□□□ 0.22
CD164-204ENST00000413644 POGZQ7Z3K3 1410 aa16.4■□□□□ 0.22
CD164-204ENST00000413644 HECW2Q9P2P5 1572 aa16.4■□□□□ 0.22
CD164-204ENST00000413644 MLH3Q9UHC1 1453 aa16.38■□□□□ 0.21
CD164-204ENST00000413644 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
CD164-204ENST00000413644 EFCAB6Q5THR3 1501 aa16.37■□□□□ 0.21
CD164-204ENST00000413644 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
CD164-204ENST00000413644 NEURL4Q96JN8 1562 aa16.37■□□□□ 0.21
CD164-204ENST00000413644 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
CD164-204ENST00000413644 LMTK2Q8IWU2 1503 aa16.37■□□□□ 0.21
CD164-204ENST00000413644 BCANQ96GW7 911 aa16.36■□□□□ 0.21
CD164-204ENST00000413644 RALBP1Q15311 655 aa16.35■□□□□ 0.21
CD164-204ENST00000413644 RAPGEF3O95398 923 aa16.34■□□□□ 0.21
CD164-204ENST00000413644 TMF1P82094 1093 aa16.34■□□□□ 0.21
CD164-204ENST00000413644 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
CD164-204ENST00000413644 UGGT1Q9NYU2 1555 aa16.33■□□□□ 0.2
CD164-204ENST00000413644 PER1O15534 1290 aaPredicted RBP16.33■□□□□ 0.2
CD164-204ENST00000413644 TMC1Q8TDI8 760 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms