RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 KDM5CP41229 1560 aa18.59■□□□□ 0.57
NUB1-201ENST00000413040 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
NUB1-201ENST00000413040 ARHGAP5Q13017 1502 aa18.58■□□□□ 0.56
NUB1-201ENST00000413040 UHRF1BP1Q6BDS2 1440 aa18.58■□□□□ 0.56
NUB1-201ENST00000413040 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.56
NUB1-201ENST00000413040 RALBP1Q15311 655 aa18.56■□□□□ 0.56
NUB1-201ENST00000413040 SMG6Q86US8 1419 aaKnown RBP18.55■□□□□ 0.56
NUB1-201ENST00000413040 FAM135AQ9P2D6 1515 aa18.54■□□□□ 0.56
NUB1-201ENST00000413040 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
NUB1-201ENST00000413040 POLR1AO95602 1720 aaPredicted RBP18.53■□□□□ 0.56
NUB1-201ENST00000413040 PLEKHH2Q8IVE3 1493 aa18.52■□□□□ 0.56
NUB1-201ENST00000413040 KTN1Q86UP2 1357 aaKnown RBP18.52■□□□□ 0.56
NUB1-201ENST00000413040 SAMD9LQ8IVG5 1584 aa18.52■□□□□ 0.56
NUB1-201ENST00000413040 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
NUB1-201ENST00000413040 FANCIQ9NVI1 1328 aa18.51■□□□□ 0.55
NUB1-201ENST00000413040 PANK3Q9H999 370 aa18.51■□□□□ 0.55
NUB1-201ENST00000413040 ARHGEF12Q9NZN5 1544 aa18.51■□□□□ 0.55
NUB1-201ENST00000413040 EFCAB2Q5VUJ9 269 aa18.5■□□□□ 0.55
NUB1-201ENST00000413040 BRD4O60885 1362 aaPredicted RBP18.49■□□□□ 0.55
NUB1-201ENST00000413040 PRAG1Q86YV5 1406 aa18.48■□□□□ 0.55
NUB1-201ENST00000413040 TMF1P82094 1093 aa18.47■□□□□ 0.55
NUB1-201ENST00000413040 AFAP1Q8N556 730 aa18.47■□□□□ 0.55
NUB1-201ENST00000413040 CDC42BPBQ9Y5S2 1711 aa18.46■□□□□ 0.55
NUB1-201ENST00000413040 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.55
NUB1-201ENST00000413040 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
NUB1-201ENST00000413040 KDM5DQ9BY66 1539 aa18.45■□□□□ 0.54
NUB1-201ENST00000413040 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
NUB1-201ENST00000413040 DISP3Q9P2K9 1392 aa18.44■□□□□ 0.54
NUB1-201ENST00000413040 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
NUB1-201ENST00000413040 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
NUB1-201ENST00000413040 TTC37Q6PGP7 1564 aa18.43■□□□□ 0.54
NUB1-201ENST00000413040 ERCC6L2Q5T890 1561 aa18.43■□□□□ 0.54
NUB1-201ENST00000413040 PER1O15534 1290 aaPredicted RBP18.43■□□□□ 0.54
NUB1-201ENST00000413040 A2MP01023 1474 aa18.43■□□□□ 0.54
NUB1-201ENST00000413040 TESK2Q96S53 571 aa18.42■□□□□ 0.54
NUB1-201ENST00000413040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.42■□□□□ 0.54
NUB1-201ENST00000413040 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
NUB1-201ENST00000413040 PREX2Q70Z35 1606 aa18.42■□□□□ 0.54
NUB1-201ENST00000413040 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
NUB1-201ENST00000413040 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
NUB1-201ENST00000413040 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
NUB1-201ENST00000413040 PLIN1O60240 522 aa18.4■□□□□ 0.54
NUB1-201ENST00000413040 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.53
NUB1-201ENST00000413040 CHD1O14646 1710 aa18.39■□□□□ 0.53
NUB1-201ENST00000413040 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
NUB1-201ENST00000413040 NPM2Q86SE8 214 aaKnown RBP18.38■□□□□ 0.53
NUB1-201ENST00000413040 ERBINQ96RT1 1412 aa18.37■□□□□ 0.53
NUB1-201ENST00000413040 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
NUB1-201ENST00000413040 TRAPPC8Q9Y2L5 1435 aa18.36■□□□□ 0.53
NUB1-201ENST00000413040 KIF3BO15066 747 aa18.36■□□□□ 0.53
NUB1-201ENST00000413040 ANP32AP39687 249 aaKnown RBP18.34■□□□□ 0.53
NUB1-201ENST00000413040 NBR1Q14596 966 aa18.34■□□□□ 0.53
NUB1-201ENST00000413040 CHGAP10645 457 aaKnown RBP18.34■□□□□ 0.53
NUB1-201ENST00000413040 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.53
NUB1-201ENST00000413040 ABCC2Q92887 1545 aa18.33■□□□□ 0.53
NUB1-201ENST00000413040 ADAMTS8Q9UP79 889 aa18.33■□□□□ 0.52
NUB1-201ENST00000413040 PLCH2O75038 1416 aa18.32■□□□□ 0.52
NUB1-201ENST00000413040 TRPM1Q7Z4N2 1603 aa18.32■□□□□ 0.52
NUB1-201ENST00000413040 GPRASP1Q5JY77 1395 aa18.32■□□□□ 0.52
NUB1-201ENST00000413040 PDE3BQ13370 1112 aa18.32■□□□□ 0.52
NUB1-201ENST00000413040 NOP58Q9Y2X3 529 aaKnown RBP18.31■□□□□ 0.52
NUB1-201ENST00000413040 DUOX2Q9NRD8 1548 aa18.3■□□□□ 0.52
NUB1-201ENST00000413040 COL17A1Q9UMD9 1497 aaPredicted RBP18.3■□□□□ 0.52
NUB1-201ENST00000413040 PAK3O75914 559 aaPredicted RBP18.3■□□□□ 0.52
NUB1-201ENST00000413040 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
NUB1-201ENST00000413040 WASHC2CQ9Y4E1 1318 aa18.27■□□□□ 0.52
NUB1-201ENST00000413040 SKAP1Q86WV1 359 aa18.26■□□□□ 0.51
NUB1-201ENST00000413040 UNC13BO14795 1591 aa18.26■□□□□ 0.51
NUB1-201ENST00000413040 PPP2R1AP30153 589 aa18.26■□□□□ 0.51
NUB1-201ENST00000413040 CFAP70Q5T0N1 1121 aa18.26■□□□□ 0.51
NUB1-201ENST00000413040 CCDC146Q8IYE0 955 aa18.26■□□□□ 0.51
NUB1-201ENST00000413040 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
NUB1-201ENST00000413040 CDCA8Q53HL2 280 aa18.25■□□□□ 0.51
NUB1-201ENST00000413040 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
NUB1-201ENST00000413040 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
NUB1-201ENST00000413040 SCAPERQ9BY12 1400 aa18.24■□□□□ 0.51
NUB1-201ENST00000413040 MAST1Q9Y2H9 1570 aa18.24■□□□□ 0.51
NUB1-201ENST00000413040 KANK1Q14678 1352 aa18.23■□□□□ 0.51
NUB1-201ENST00000413040 IQGAP3Q86VI3 1631 aa18.23■□□□□ 0.51
NUB1-201ENST00000413040 PRDM15P57071 1507 aaPredicted RBP18.22■□□□□ 0.51
NUB1-201ENST00000413040 E9PCH4 1651 aa18.22■□□□□ 0.51
NUB1-201ENST00000413040 PLXNC1O60486 1568 aa18.21■□□□□ 0.51
NUB1-201ENST00000413040 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
NUB1-201ENST00000413040 IPO9Q96P70 1041 aaKnown RBP18.2■□□□□ 0.5
NUB1-201ENST00000413040 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
NUB1-201ENST00000413040 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
NUB1-201ENST00000413040 ZCCHC11Q5TAX3 1644 aaKnown RBP18.19■□□□□ 0.5
NUB1-201ENST00000413040 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
NUB1-201ENST00000413040 GGT6Q6P531 493 aa18.18■□□□□ 0.5
NUB1-201ENST00000413040 EIF2AK4Q9P2K8 1649 aaKnown RBP18.18■□□□□ 0.5
NUB1-201ENST00000413040 SHROOM2Q13796 1616 aa18.18■□□□□ 0.5
NUB1-201ENST00000413040 PDE4AP27815 886 aa18.18■□□□□ 0.5
NUB1-201ENST00000413040 ADGRF5Q8IZF2 1346 aa18.17■□□□□ 0.5
NUB1-201ENST00000413040 TCERG1O14776 1098 aaKnown RBP18.17■□□□□ 0.5
NUB1-201ENST00000413040 ABCC1P33527 1531 aa18.17■□□□□ 0.5
NUB1-201ENST00000413040 GOLGA2Q08379 1002 aa18.16■□□□□ 0.5
NUB1-201ENST00000413040 ATP10AO60312 1499 aa18.16■□□□□ 0.5
NUB1-201ENST00000413040 APAF1O14727 1248 aa18.16■□□□□ 0.5
NUB1-201ENST00000413040 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
NUB1-201ENST00000413040 FANCAO15360 1455 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms