RNA–Protein interactions for RNA: ENST00000412996.1

AC004870.3-202, humanhuman

TSL 3 BASIC

Gene AC004870.3, Length 432 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004870.3-202ENST00000412996 PTPN5P54829 565 aa12.23□□□□□ -0.45
AC004870.3-202ENST00000412996 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
AC004870.3-202ENST00000412996 GOLGA8CPA6NN73 597 aa12.22□□□□□ -0.45
AC004870.3-202ENST00000412996 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
AC004870.3-202ENST00000412996 DDX12PQ92771 950 aa12.2□□□□□ -0.46
AC004870.3-202ENST00000412996 EPAS1Q99814 870 aa12.2□□□□□ -0.46
AC004870.3-202ENST00000412996 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
AC004870.3-202ENST00000412996 WNT2BQ93097 391 aa12.19□□□□□ -0.46
AC004870.3-202ENST00000412996 C6orf132Q5T0Z8 1188 aa12.18□□□□□ -0.46
AC004870.3-202ENST00000412996 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
AC004870.3-202ENST00000412996 RABGEF1Q9UJ41 708 aa12.18□□□□□ -0.46
AC004870.3-202ENST00000412996 RBM33Q96EV2 1170 aaKnown RBP12.17□□□□□ -0.46
AC004870.3-202ENST00000412996 E2F4Q16254 413 aa12.15□□□□□ -0.46
AC004870.3-202ENST00000412996 PDIA6Q15084 440 aa12.14□□□□□ -0.47
AC004870.3-202ENST00000412996 WDR70Q9NW82 654 aa12.14□□□□□ -0.47
AC004870.3-202ENST00000412996 KIAA1468Q9P260 1216 aa12.12□□□□□ -0.47
AC004870.3-202ENST00000412996 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
AC004870.3-202ENST00000412996 NBR1Q14596 966 aa12.11□□□□□ -0.47
AC004870.3-202ENST00000412996 ONECUT3O60422 494 aaPredicted RBP12.08□□□□□ -0.48
AC004870.3-202ENST00000412996 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
AC004870.3-202ENST00000412996 MAP3K7O43318 606 aa12.07□□□□□ -0.48
AC004870.3-202ENST00000412996 TSR1Q2NL82 804 aaKnown RBP12.07□□□□□ -0.48
AC004870.3-202ENST00000412996 ANKK1Q8NFD2 765 aa12.07□□□□□ -0.48
AC004870.3-202ENST00000412996 TRIM6-TRIM34B2RNG4 842 aa12.06□□□□□ -0.48
AC004870.3-202ENST00000412996 LAPTM4BQ86VI4 370 aa12.06□□□□□ -0.48
AC004870.3-202ENST00000412996 ARIH1Q9Y4X5 557 aaPredicted RBP12.06□□□□□ -0.48
AC004870.3-202ENST00000412996 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
AC004870.3-202ENST00000412996 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
AC004870.3-202ENST00000412996 ZFRQ96KR1 1074 aaKnown RBP12.04□□□□□ -0.48
AC004870.3-202ENST00000412996 BCAMP50895 628 aa12.03□□□□□ -0.48
AC004870.3-202ENST00000412996 PRIM1P49642 420 aaKnown RBP12.02□□□□□ -0.49
AC004870.3-202ENST00000412996 SOWAHBA6NEL2 793 aa12.01□□□□□ -0.49
AC004870.3-202ENST00000412996 TSKSQ9UJT2 592 aa12□□□□□ -0.49
AC004870.3-202ENST00000412996 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
AC004870.3-202ENST00000412996 PACS2Q86VP3 889 aa11.98□□□□□ -0.49
AC004870.3-202ENST00000412996 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
AC004870.3-202ENST00000412996 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
AC004870.3-202ENST00000412996 OSBPP22059 807 aa11.95□□□□□ -0.5
AC004870.3-202ENST00000412996 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
AC004870.3-202ENST00000412996 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
AC004870.3-202ENST00000412996 PRSS12P56730 875 aa11.94□□□□□ -0.5
AC004870.3-202ENST00000412996 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
AC004870.3-202ENST00000412996 CERKQ8TCT0 537 aa11.92□□□□□ -0.5
AC004870.3-202ENST00000412996 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
AC004870.3-202ENST00000412996 CDHR5Q9HBB8 845 aa11.92□□□□□ -0.5
AC004870.3-202ENST00000412996 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.92□□□□□ -0.5
AC004870.3-202ENST00000412996 SMAPO00193 183 aa11.91□□□□□ -0.5
AC004870.3-202ENST00000412996 NYAP1Q6ZVC0 841 aa11.9□□□□□ -0.5
AC004870.3-202ENST00000412996 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
AC004870.3-202ENST00000412996 A0A0G2JS52 829 aa11.89□□□□□ -0.51
AC004870.3-202ENST00000412996 TSR3Q9UJK0 312 aaKnown RBP11.89□□□□□ -0.51
AC004870.3-202ENST00000412996 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
AC004870.3-202ENST00000412996 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
AC004870.3-202ENST00000412996 TATDN2Q93075 761 aa11.87□□□□□ -0.51
AC004870.3-202ENST00000412996 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
AC004870.3-202ENST00000412996 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
AC004870.3-202ENST00000412996 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
AC004870.3-202ENST00000412996 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
AC004870.3-202ENST00000412996 NBPF26B4DH59 902 aa11.83□□□□□ -0.52
AC004870.3-202ENST00000412996 RGS20O76081 388 aa11.83□□□□□ -0.52
AC004870.3-202ENST00000412996 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
AC004870.3-202ENST00000412996 MLLT3P42568 568 aaPredicted RBP11.82□□□□□ -0.52
AC004870.3-202ENST00000412996 PPP4CP60510 307 aa11.82□□□□□ -0.52
AC004870.3-202ENST00000412996 NUDT18Q6ZVK8 323 aa11.82□□□□□ -0.52
AC004870.3-202ENST00000412996 KCNC4Q03721 635 aa11.81□□□□□ -0.52
AC004870.3-202ENST00000412996 RBM27Q9P2N5 1060 aaKnown RBP11.8□□□□□ -0.52
AC004870.3-202ENST00000412996 PADI6Q6TGC4 694 aa11.79□□□□□ -0.52
AC004870.3-202ENST00000412996 TTC13Q8NBP0 860 aa11.77□□□□□ -0.53
AC004870.3-202ENST00000412996 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
AC004870.3-202ENST00000412996 RNF40O75150 1001 aa11.74□□□□□ -0.53
AC004870.3-202ENST00000412996 TJAP1Q5JTD0 557 aa11.7□□□□□ -0.54
AC004870.3-202ENST00000412996 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
AC004870.3-202ENST00000412996 IRX2Q9BZI1 471 aaPredicted RBP11.7□□□□□ -0.54
AC004870.3-202ENST00000412996 PTGDRQ13258 359 aa11.69□□□□□ -0.54
AC004870.3-202ENST00000412996 EYA1Q99502 592 aa11.69□□□□□ -0.54
AC004870.3-202ENST00000412996 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
AC004870.3-202ENST00000412996 MTRQ99707 1265 aa11.68□□□□□ -0.54
AC004870.3-202ENST00000412996 APLP1P51693 650 aa11.67□□□□□ -0.54
AC004870.3-202ENST00000412996 SEMA3EO15041 775 aa11.66□□□□□ -0.54
AC004870.3-202ENST00000412996 NUTM2FA1L443 756 aa11.65□□□□□ -0.54
AC004870.3-202ENST00000412996 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
AC004870.3-202ENST00000412996 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
AC004870.3-202ENST00000412996 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
AC004870.3-202ENST00000412996 ZNF516Q92618 1163 aa11.63□□□□□ -0.55
AC004870.3-202ENST00000412996 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
AC004870.3-202ENST00000412996 SLC4A3P48751 1232 aa11.6□□□□□ -0.55
AC004870.3-202ENST00000412996 ADGRG1Q9Y653 693 aa11.6□□□□□ -0.55
AC004870.3-202ENST00000412996 FAM161AQ3B820 660 aa11.59□□□□□ -0.55
AC004870.3-202ENST00000412996 RBM46Q8TBY0 533 aaKnown RBP11.59□□□□□ -0.55
AC004870.3-202ENST00000412996 DNAJB2P25686 324 aa11.57□□□□□ -0.56
AC004870.3-202ENST00000412996 COPS2P61201 443 aa11.57□□□□□ -0.56
AC004870.3-202ENST00000412996 PPP1R18Q6NYC8 613 aa11.57□□□□□ -0.56
AC004870.3-202ENST00000412996 FCHSD2O94868 740 aa11.56□□□□□ -0.56
AC004870.3-202ENST00000412996 NKX2-3Q8TAU0 364 aa11.56□□□□□ -0.56
AC004870.3-202ENST00000412996 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
AC004870.3-202ENST00000412996 TMEM134Q9H6X4 195 aa11.54□□□□□ -0.56
AC004870.3-202ENST00000412996 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
AC004870.3-202ENST00000412996 RBM26Q5T8P6 1007 aaKnown RBP11.52□□□□□ -0.57
AC004870.3-202ENST00000412996 PRKD2Q9BZL6 878 aa11.52□□□□□ -0.57
AC004870.3-202ENST00000412996 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms