RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 TRIM52Q96A61 297 aa27.79■■■□□ 2.04
LMO2-203ENST00000411482 TONSLQ96HA7 1378 aa27.74■■■□□ 2.03
LMO2-203ENST00000411482 BCORL1Q5H9F3 1711 aa27.73■■■□□ 2.03
LMO2-203ENST00000411482 ARID4BQ4LE39 1312 aaPredicted RBP27.73■■■□□ 2.03
LMO2-203ENST00000411482 A2MP01023 1474 aa27.72■■■□□ 2.03
LMO2-203ENST00000411482 AGLP35573 1532 aa27.72■■■□□ 2.03
LMO2-203ENST00000411482 PLXNC1O60486 1568 aa27.72■■■□□ 2.03
LMO2-203ENST00000411482 ANKRD30BQ9BXX2 1392 aa27.72■■■□□ 2.03
LMO2-203ENST00000411482 PZPP20742 1482 aa27.71■■■□□ 2.03
LMO2-203ENST00000411482 ANKRD50Q9ULJ7 1429 aa27.71■■■□□ 2.03
LMO2-203ENST00000411482 ADAMTSL3P82987 1691 aa27.7■■■□□ 2.02
LMO2-203ENST00000411482 DHX29Q7Z478 1369 aaKnown RBP27.69■■■□□ 2.02
LMO2-203ENST00000411482 KDM5DQ9BY66 1539 aa27.64■■■□□ 2.02
LMO2-203ENST00000411482 MLECQ14165 292 aa27.63■■■□□ 2.01
LMO2-203ENST00000411482 SLC4A1APQ9BWU0 796 aaKnown RBP27.62■■■□□ 2.01
LMO2-203ENST00000411482 RPRD2Q5VT52 1461 aaKnown RBP27.61■■■□□ 2.01
LMO2-203ENST00000411482 KIF15Q9NS87 1388 aa27.61■■■□□ 2.01
LMO2-203ENST00000411482 MADDQ8WXG6 1647 aa27.59■■■□□ 2.01
LMO2-203ENST00000411482 DUOX2Q9NRD8 1548 aa27.57■■■□□ 2
LMO2-203ENST00000411482 KIF3BO15066 747 aa27.54■■■□□ 2
LMO2-203ENST00000411482 FER1L4A9Z1Z3 1794 aa27.53■■■□□ 2
LMO2-203ENST00000411482 MIER1Q8N108 512 aa27.52■■■□□ 2
LMO2-203ENST00000411482 FOXD1Q16676 465 aa27.51■■■□□ 2
LMO2-203ENST00000411482 GGT6Q6P531 493 aa27.51■■□□□ 1.99
LMO2-203ENST00000411482 RIMS1Q86UR5 1692 aaKnown RBP27.51■■□□□ 1.99
LMO2-203ENST00000411482 EIF2AK4Q9P2K8 1649 aaKnown RBP27.5■■□□□ 1.99
LMO2-203ENST00000411482 PTPRMP28827 1452 aa27.48■■□□□ 1.99
LMO2-203ENST00000411482 NUP155O75694 1391 aa27.48■■□□□ 1.99
LMO2-203ENST00000411482 ERBINQ96RT1 1412 aa27.48■■□□□ 1.99
LMO2-203ENST00000411482 L3MBTL2Q969R5 705 aa27.46■■□□□ 1.99
LMO2-203ENST00000411482 RNF17Q9BXT8 1623 aaKnown RBP27.46■■□□□ 1.99
LMO2-203ENST00000411482 PKD2Q13563 968 aa27.45■■□□□ 1.98
LMO2-203ENST00000411482 PPP6R1Q9UPN7 881 aa27.45■■□□□ 1.98
LMO2-203ENST00000411482 MROH1Q8NDA8 1641 aa27.44■■□□□ 1.98
LMO2-203ENST00000411482 UNC13BO14795 1591 aa27.42■■□□□ 1.98
LMO2-203ENST00000411482 CLTCQ00610 1675 aaKnown RBP27.39■■□□□ 1.98
LMO2-203ENST00000411482 AEBP2Q6ZN18 517 aaPredicted RBP27.39■■□□□ 1.98
LMO2-203ENST00000411482 DEPDC5O75140 1603 aa27.39■■□□□ 1.97
LMO2-203ENST00000411482 CEBPAP49715 358 aaPredicted RBP27.38■■□□□ 1.97
LMO2-203ENST00000411482 CNTLNQ9NXG0 1405 aa27.38■■□□□ 1.97
LMO2-203ENST00000411482 FAM135AQ9P2D6 1515 aa27.37■■□□□ 1.97
LMO2-203ENST00000411482 MROH2AA6NES4 1674 aa27.36■■□□□ 1.97
LMO2-203ENST00000411482 C3P01024 1663 aa27.36■■□□□ 1.97
LMO2-203ENST00000411482 ZMYM3Q14202 1370 aa27.35■■□□□ 1.97
LMO2-203ENST00000411482 ESF1Q9H501 851 aaKnown RBP27.35■■□□□ 1.97
LMO2-203ENST00000411482 PRDM15P57071 1507 aaPredicted RBP27.34■■□□□ 1.97
LMO2-203ENST00000411482 WASHC2CQ9Y4E1 1318 aa27.32■■□□□ 1.96
LMO2-203ENST00000411482 ABCC3O15438 1527 aa27.31■■□□□ 1.96
LMO2-203ENST00000411482 VWDEQ8N2E2 1590 aa27.31■■□□□ 1.96
LMO2-203ENST00000411482 IQGAP3Q86VI3 1631 aa27.31■■□□□ 1.96
LMO2-203ENST00000411482 CEP152O94986 1710 aa27.29■■□□□ 1.96
LMO2-203ENST00000411482 PLPPR3Q6T4P5 718 aa27.29■■□□□ 1.96
LMO2-203ENST00000411482 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.29■■□□□ 1.96
LMO2-203ENST00000411482 SETD1BQ9UPS6 1966 aaKnown RBP27.28■■□□□ 1.96
LMO2-203ENST00000411482 NBPF8Q3BBV2 869 aa27.27■■□□□ 1.96
LMO2-203ENST00000411482 ZC3H13Q5T200 1668 aaKnown RBP27.26■■□□□ 1.96
LMO2-203ENST00000411482 UHRF1BP1Q6BDS2 1440 aa27.24■■□□□ 1.95
LMO2-203ENST00000411482 EIF4G2P78344 907 aaKnown RBP eCLIP27.22■■□□□ 1.95
LMO2-203ENST00000411482 CENPBP07199 599 aaPredicted RBP27.21■■□□□ 1.95
LMO2-203ENST00000411482 LMTK2Q8IWU2 1503 aa27.21■■□□□ 1.95
LMO2-203ENST00000411482 CFAP65Q6ZU64 1925 aaKnown RBP27.21■■□□□ 1.95
LMO2-203ENST00000411482 HSPA5P11021 654 aaKnown RBP27.21■■□□□ 1.95
LMO2-203ENST00000411482 KANK1Q14678 1352 aa27.2■■□□□ 1.95
LMO2-203ENST00000411482 CAMSAP1Q5T5Y3 1602 aa27.2■■□□□ 1.95
LMO2-203ENST00000411482 DDX10Q13206 875 aaKnown RBP27.2■■□□□ 1.94
LMO2-203ENST00000411482 FBXO31Q5XUX0 539 aaPredicted RBP27.2■■□□□ 1.94
LMO2-203ENST00000411482 PLA2R1Q13018 1463 aa27.19■■□□□ 1.94
LMO2-203ENST00000411482 SPATA31E1Q6ZUB1 1445 aa27.18■■□□□ 1.94
LMO2-203ENST00000411482 HIRIP3Q9BW71 556 aaPredicted RBP27.18■■□□□ 1.94
LMO2-203ENST00000411482 NPATQ14207 1427 aa27.18■■□□□ 1.94
LMO2-203ENST00000411482 ARHGAP31Q2M1Z3 1444 aa27.16■■□□□ 1.94
LMO2-203ENST00000411482 TET3O43151 1660 aa27.11■■□□□ 1.93
LMO2-203ENST00000411482 PREX1Q8TCU6 1659 aa27.11■■□□□ 1.93
LMO2-203ENST00000411482 LMTK3Q96Q04 1460 aa27.11■■□□□ 1.93
LMO2-203ENST00000411482 EFCAB6Q5THR3 1501 aa27.11■■□□□ 1.93
LMO2-203ENST00000411482 CCDC144AA2RUR9 1427 aa27.09■■□□□ 1.93
LMO2-203ENST00000411482 SPATA31D1Q6ZQQ2 1576 aa27.09■■□□□ 1.93
LMO2-203ENST00000411482 ERVK-7P63135 1459 aa27.08■■□□□ 1.93
LMO2-203ENST00000411482 RALGAPBQ86X10 1494 aa27.08■■□□□ 1.93
LMO2-203ENST00000411482 WASHC2AQ641Q2 1341 aa27.06■■□□□ 1.92
LMO2-203ENST00000411482 TNRQ92752 1358 aa27.06■■□□□ 1.92
LMO2-203ENST00000411482 E9PCH4 1651 aa27.05■■□□□ 1.92
LMO2-203ENST00000411482 MYO3AQ8NEV4 1616 aa27.03■■□□□ 1.92
LMO2-203ENST00000411482 PTPRTO14522 1441 aa27.02■■□□□ 1.92
LMO2-203ENST00000411482 NOS1P29475 1434 aa27.01■■□□□ 1.91
LMO2-203ENST00000411482 CCDC7Q96M83 1385 aa26.99■■□□□ 1.91
LMO2-203ENST00000411482 CCER2I3L3R5 266 aa26.99■■□□□ 1.91
LMO2-203ENST00000411482 HSPA2P54652 639 aa26.99■■□□□ 1.91
LMO2-203ENST00000411482 ZNF142P52746 1687 aaPredicted RBP26.98■■□□□ 1.91
LMO2-203ENST00000411482 POLR1AO95602 1720 aaPredicted RBP26.97■■□□□ 1.91
LMO2-203ENST00000411482 SYNMO15061 1565 aa26.97■■□□□ 1.91
LMO2-203ENST00000411482 CEP170BQ9Y4F5 1589 aaPredicted RBP26.96■■□□□ 1.91
LMO2-203ENST00000411482 C11orf95C9JLR9 678 aaPredicted RBP26.95■■□□□ 1.91
LMO2-203ENST00000411482 DCAF11Q8TEB1 546 aa26.95■■□□□ 1.91
LMO2-203ENST00000411482 TRPM2O94759 1503 aa26.95■■□□□ 1.91
LMO2-203ENST00000411482 A2ML1A8K2U0 1454 aa26.95■■□□□ 1.9
LMO2-203ENST00000411482 NLRP1Q9C000 1473 aa26.95■■□□□ 1.9
LMO2-203ENST00000411482 YTHDC1Q96MU7 727 aaKnown RBP26.95■■□□□ 1.9
LMO2-203ENST00000411482 PRAG1Q86YV5 1406 aa26.95■■□□□ 1.9
LMO2-203ENST00000411482 USP47Q96K76 1375 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms