RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 ZNF644Q9H582 1327 aaPredicted RBP18.83■□□□□ 0.61
SERF2-210ENST00000409960 FAM135AQ9P2D6 1515 aa18.83■□□□□ 0.6
SERF2-210ENST00000409960 DHX29Q7Z478 1369 aaKnown RBP18.82■□□□□ 0.6
SERF2-210ENST00000409960 CCDC141Q6ZP82 1450 aa18.81■□□□□ 0.6
SERF2-210ENST00000409960 TCOF1Q13428 1488 aaKnown RBP18.79■□□□□ 0.6
SERF2-210ENST00000409960 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
SERF2-210ENST00000409960 CAMSAP2Q08AD1 1489 aa18.78■□□□□ 0.6
SERF2-210ENST00000409960 NCKAP5LQ9HCH0 1330 aa18.78■□□□□ 0.6
SERF2-210ENST00000409960 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.6
SERF2-210ENST00000409960 KDM5DQ9BY66 1539 aa18.76■□□□□ 0.59
SERF2-210ENST00000409960 DISP3Q9P2K9 1392 aa18.76■□□□□ 0.59
SERF2-210ENST00000409960 KIF3BO15066 747 aa18.75■□□□□ 0.59
SERF2-210ENST00000409960 ARHGEF5Q12774 1597 aa18.75■□□□□ 0.59
SERF2-210ENST00000409960 DNMT1P26358 1616 aaKnown RBP18.74■□□□□ 0.59
SERF2-210ENST00000409960 PZPP20742 1482 aa18.73■□□□□ 0.59
SERF2-210ENST00000409960 TSPY4P0CV99 314 aa18.73■□□□□ 0.59
SERF2-210ENST00000409960 TSPY10P0CW01 314 aa18.73■□□□□ 0.59
SERF2-210ENST00000409960 ZNF335Q9H4Z2 1342 aaPredicted RBP18.73■□□□□ 0.59
SERF2-210ENST00000409960 WASHC2CQ9Y4E1 1318 aa18.72■□□□□ 0.59
SERF2-210ENST00000409960 TNRQ92752 1358 aa18.71■□□□□ 0.59
SERF2-210ENST00000409960 POLR1AO95602 1720 aaPredicted RBP18.69■□□□□ 0.58
SERF2-210ENST00000409960 SPATA31D1Q6ZQQ2 1576 aa18.69■□□□□ 0.58
SERF2-210ENST00000409960 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
SERF2-210ENST00000409960 LRRC9Q6ZRR7 1453 aa18.68■□□□□ 0.58
SERF2-210ENST00000409960 NLRP1Q9C000 1473 aa18.68■□□□□ 0.58
SERF2-210ENST00000409960 UBAP1LF5GYI3 381 aa18.67■□□□□ 0.58
SERF2-210ENST00000409960 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
SERF2-210ENST00000409960 MAP3K1Q13233 1512 aa18.65■□□□□ 0.58
SERF2-210ENST00000409960 MAST1Q9Y2H9 1570 aa18.65■□□□□ 0.58
SERF2-210ENST00000409960 FBXO31Q5XUX0 539 aaPredicted RBP18.65■□□□□ 0.58
SERF2-210ENST00000409960 THEMISQ8N1K5 641 aaPredicted RBP18.65■□□□□ 0.58
SERF2-210ENST00000409960 ZC3H13Q5T200 1668 aaKnown RBP18.65■□□□□ 0.58
SERF2-210ENST00000409960 MIA2Q96PC5 1412 aa18.65■□□□□ 0.58
SERF2-210ENST00000409960 CPS1P31327 1500 aa18.64■□□□□ 0.58
SERF2-210ENST00000409960 RNF17Q9BXT8 1623 aaKnown RBP18.64■□□□□ 0.57
SERF2-210ENST00000409960 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
SERF2-210ENST00000409960 ANKLE2Q86XL3 938 aa18.63■□□□□ 0.57
SERF2-210ENST00000409960 NEURL4Q96JN8 1562 aa18.63■□□□□ 0.57
SERF2-210ENST00000409960 UGGT1Q9NYU2 1555 aa18.63■□□□□ 0.57
SERF2-210ENST00000409960 SOCS7O14512 581 aa18.61■□□□□ 0.57
SERF2-210ENST00000409960 ILDR2Q71H61 639 aa18.61■□□□□ 0.57
SERF2-210ENST00000409960 DEPDC5O75140 1603 aa18.6■□□□□ 0.57
SERF2-210ENST00000409960 SHANK2Q9UPX8 1470 aa18.59■□□□□ 0.57
SERF2-210ENST00000409960 MYOM3Q5VTT5 1437 aa18.59■□□□□ 0.57
SERF2-210ENST00000409960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.59■□□□□ 0.575e-37■□□□□ 10.7
SERF2-210ENST00000409960 ABCC3O15438 1527 aa18.59■□□□□ 0.57
SERF2-210ENST00000409960 MED14O60244 1454 aa18.58■□□□□ 0.57
SERF2-210ENST00000409960 TOM1O60784 492 aa18.57■□□□□ 0.56
SERF2-210ENST00000409960 NPHP4O75161 1426 aaPredicted RBP18.56■□□□□ 0.56
SERF2-210ENST00000409960 DUOX2Q9NRD8 1548 aa18.55■□□□□ 0.56
SERF2-210ENST00000409960 IQGAP1P46940 1657 aa18.54■□□□□ 0.56
SERF2-210ENST00000409960 ERVK-7P63135 1459 aa18.53■□□□□ 0.56
SERF2-210ENST00000409960 KANK4Q5T7N3 995 aaPredicted RBP18.53■□□□□ 0.56
SERF2-210ENST00000409960 VWDEQ8N2E2 1590 aa18.53■□□□□ 0.56
SERF2-210ENST00000409960 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
SERF2-210ENST00000409960 RNF216Q9NWF9 866 aaPredicted RBP18.52■□□□□ 0.56
SERF2-210ENST00000409960 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.55
SERF2-210ENST00000409960 CEP152O94986 1710 aa18.5■□□□□ 0.55
SERF2-210ENST00000409960 APLP2Q06481 763 aa18.5■□□□□ 0.55
SERF2-210ENST00000409960 ERBINQ96RT1 1412 aa18.49■□□□□ 0.55
SERF2-210ENST00000409960 PRDM15P57071 1507 aaPredicted RBP18.49■□□□□ 0.55
SERF2-210ENST00000409960 CROCC2H7BZ55 1655 aa18.48■□□□□ 0.55
SERF2-210ENST00000409960 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
SERF2-210ENST00000409960 PIP4K2BP78356 416 aa18.48■□□□□ 0.55
SERF2-210ENST00000409960 ARHGAP31Q2M1Z3 1444 aa18.48■□□□□ 0.55
SERF2-210ENST00000409960 SYNMO15061 1565 aa18.47■□□□□ 0.55
SERF2-210ENST00000409960 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
SERF2-210ENST00000409960 PTPN23Q9H3S7 1636 aa18.46■□□□□ 0.55
SERF2-210ENST00000409960 HOXD11P31277 338 aaPredicted RBP18.46■□□□□ 0.55
SERF2-210ENST00000409960 CFAP65Q6ZU64 1925 aaKnown RBP18.46■□□□□ 0.55
SERF2-210ENST00000409960 HSPA1LP34931 641 aa18.45■□□□□ 0.54
SERF2-210ENST00000409960 SCAF11Q99590 1463 aaKnown RBP18.45■□□□□ 0.54
SERF2-210ENST00000409960 ABCC5O15440 1437 aa18.44■□□□□ 0.54
SERF2-210ENST00000409960 KANK1Q14678 1352 aa18.43■□□□□ 0.54
SERF2-210ENST00000409960 SLIT1O75093 1534 aa18.43■□□□□ 0.54
SERF2-210ENST00000409960 DAPK1P53355 1430 aa18.41■□□□□ 0.54
SERF2-210ENST00000409960 ARHGAP23Q9P227 1491 aa18.41■□□□□ 0.54
SERF2-210ENST00000409960 LRRC7Q96NW7 1537 aa18.41■□□□□ 0.54
SERF2-210ENST00000409960 RRP7BPQ9NSQ0 103 aa18.41■□□□□ 0.54
SERF2-210ENST00000409960 MED1Q15648 1581 aaPredicted RBP18.4■□□□□ 0.54
SERF2-210ENST00000409960 EID1Q9Y6B2 187 aa18.4■□□□□ 0.54
SERF2-210ENST00000409960 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
SERF2-210ENST00000409960 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
SERF2-210ENST00000409960 KDM5AP29375 1690 aaKnown RBP18.39■□□□□ 0.53
SERF2-210ENST00000409960 ANKRD30AQ9BXX3 1397 aa18.39■□□□□ 0.53
SERF2-210ENST00000409960 TXNDC2Q86VQ3 553 aa18.38■□□□□ 0.53
SERF2-210ENST00000409960 ALKQ9UM73 1620 aa18.38■□□□□ 0.53
SERF2-210ENST00000409960 LMTK2Q8IWU2 1503 aa18.37■□□□□ 0.53
SERF2-210ENST00000409960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.36■□□□□ 0.538e-27■■□□□ 14.2
SERF2-210ENST00000409960 STAG3Q9UJ98 1225 aa18.36■□□□□ 0.53
SERF2-210ENST00000409960 PIK3C2BO00750 1634 aa18.35■□□□□ 0.53
SERF2-210ENST00000409960 LTKP29376 864 aa18.35■□□□□ 0.53
SERF2-210ENST00000409960 TMEM2Q9UHN6 1383 aa18.34■□□□□ 0.53
SERF2-210ENST00000409960 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.52
SERF2-210ENST00000409960 CHIC2Q9UKJ5 165 aa18.3■□□□□ 0.52
SERF2-210ENST00000409960 ADGRL2O95490 1459 aa18.3■□□□□ 0.52
SERF2-210ENST00000409960 IDI1Q13907 227 aa18.28■□□□□ 0.52
SERF2-210ENST00000409960 SLC52A1Q9NWF4 448 aa18.28■□□□□ 0.52
SERF2-210ENST00000409960 NOS1P29475 1434 aa18.28■□□□□ 0.52
SERF2-210ENST00000409960 RPRD2Q5VT52 1461 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms