RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 PHLDB1Q86UU1 1377 aa31.49■■■□□ 2.63
SPIRE1-202ENST00000409402 SPRYD3Q8NCJ5 442 aa31.47■■■□□ 2.63
SPIRE1-202ENST00000409402 C1orf141Q5JVX7 400 aa31.45■■■□□ 2.63
SPIRE1-202ENST00000409402 KIF15Q9NS87 1388 aa31.45■■■□□ 2.62
SPIRE1-202ENST00000409402 CENPJQ9HC77 1338 aaPredicted RBP31.44■■■□□ 2.62
SPIRE1-202ENST00000409402 FGD5Q6ZNL6 1462 aa31.44■■■□□ 2.62
SPIRE1-202ENST00000409402 CGNL1Q0VF96 1302 aa31.44■■■□□ 2.62
SPIRE1-202ENST00000409402 ST20-MTHFSA0A0A6YYL1 179 aa31.43■■■□□ 2.62
SPIRE1-202ENST00000409402 ERICH6BQ5W0A0 696 aa31.43■■■□□ 2.62
SPIRE1-202ENST00000409402 TRIM6-TRIM34B2RNG4 842 aa31.42■■■□□ 2.62
SPIRE1-202ENST00000409402 PANK3Q9H999 370 aa31.41■■■□□ 2.62
SPIRE1-202ENST00000409402 MINK1Q8N4C8 1332 aaPredicted RBP31.4■■■□□ 2.62
SPIRE1-202ENST00000409402 PDE3BQ13370 1112 aa31.39■■■□□ 2.62
SPIRE1-202ENST00000409402 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.39■■■□□ 2.62
SPIRE1-202ENST00000409402 FRAT2O75474 233 aaPredicted RBP31.38■■■□□ 2.61
SPIRE1-202ENST00000409402 AEBP2Q6ZN18 517 aaPredicted RBP31.38■■■□□ 2.61
SPIRE1-202ENST00000409402 HTATSF1O43719 755 aaKnown RBP31.37■■■□□ 2.61
SPIRE1-202ENST00000409402 CLUAP1Q96AJ1 413 aa31.37■■■□□ 2.61
SPIRE1-202ENST00000409402 MYBBP1AQ9BQG0 1328 aaKnown RBP31.35■■■□□ 2.61
SPIRE1-202ENST00000409402 RAD54L2Q9Y4B4 1467 aa31.34■■■□□ 2.61
SPIRE1-202ENST00000409402 DRC7Q8IY82 874 aa31.33■■■□□ 2.61
SPIRE1-202ENST00000409402 RUSC2Q8N2Y8 1516 aa31.31■■■□□ 2.6
SPIRE1-202ENST00000409402 HSP90B1P14625 803 aaKnown RBP31.31■■■□□ 2.6
SPIRE1-202ENST00000409402 TEFQ10587 303 aa31.31■■■□□ 2.6
SPIRE1-202ENST00000409402 PSME1Q06323 249 aa31.3■■■□□ 2.6
SPIRE1-202ENST00000409402 MYOM3Q5VTT5 1437 aa31.3■■■□□ 2.6
SPIRE1-202ENST00000409402 RRP7AQ9Y3A4 280 aaKnown RBP31.3■■■□□ 2.6
SPIRE1-202ENST00000409402 IGF1RP08069 1367 aa31.29■■■□□ 2.6
SPIRE1-202ENST00000409402 GBP4Q96PP9 640 aa31.28■■■□□ 2.6
SPIRE1-202ENST00000409402 TCERG1O14776 1098 aaKnown RBP31.28■■■□□ 2.6
SPIRE1-202ENST00000409402 TTC5Q8N0Z6 440 aa31.28■■■□□ 2.6
SPIRE1-202ENST00000409402 MEX3CQ5U5Q3 659 aaKnown RBP31.27■■■□□ 2.6
SPIRE1-202ENST00000409402 PTMSP20962 102 aa31.27■■■□□ 2.6
SPIRE1-202ENST00000409402 MFAP1P55081 439 aaKnown RBP31.24■■■□□ 2.59
SPIRE1-202ENST00000409402 CHAF1AQ13111 956 aaPredicted RBP31.24■■■□□ 2.59
SPIRE1-202ENST00000409402 MSH5O43196 834 aa31.24■■■□□ 2.59
SPIRE1-202ENST00000409402 AQRO60306 1485 aaKnown RBP eCLIP31.22■■■□□ 2.59
SPIRE1-202ENST00000409402 TOMM22Q9NS69 142 aa31.22■■■□□ 2.59
SPIRE1-202ENST00000409402 L1TD1Q5T7N2 865 aaKnown RBP31.22■■■□□ 2.59
SPIRE1-202ENST00000409402 USP47Q96K76 1375 aa31.21■■■□□ 2.59
SPIRE1-202ENST00000409402 CCDC34Q96HJ3 373 aa31.21■■■□□ 2.59
SPIRE1-202ENST00000409402 NAP1L5Q96NT1 182 aaPredicted RBP31.19■■■□□ 2.58
SPIRE1-202ENST00000409402 ATF3P18847 181 aa31.19■■■□□ 2.58
SPIRE1-202ENST00000409402 ELL2O00472 640 aaPredicted RBP31.18■■■□□ 2.58
SPIRE1-202ENST00000409402 NEXNQ0ZGT2 675 aa31.17■■■□□ 2.58
SPIRE1-202ENST00000409402 NCBP3Q53F19 620 aaKnown RBP31.17■■■□□ 2.58
SPIRE1-202ENST00000409402 KIAA2012Q0VF49 1180 aa31.16■■■□□ 2.58
SPIRE1-202ENST00000409402 DIAPH1O60610 1272 aaKnown RBP31.15■■■□□ 2.58
SPIRE1-202ENST00000409402 DHX57Q6P158 1386 aaKnown RBP31.15■■■□□ 2.58
SPIRE1-202ENST00000409402 NCAPD3P42695 1498 aa31.14■■■□□ 2.58
SPIRE1-202ENST00000409402 PRDM2Q13029 1718 aa31.14■■■□□ 2.58
SPIRE1-202ENST00000409402 CUX1P39880 1505 aa31.14■■■□□ 2.58
SPIRE1-202ENST00000409402 MSNP26038 577 aaKnown RBP31.14■■■□□ 2.58
SPIRE1-202ENST00000409402 SYAP1Q96A49 352 aaPredicted RBP31.13■■■□□ 2.57
SPIRE1-202ENST00000409402 STAC3Q96MF2 364 aa31.13■■■□□ 2.57
SPIRE1-202ENST00000409402 E9PSI1 815 aa31.13■■■□□ 2.57
SPIRE1-202ENST00000409402 RASSF8Q8NHQ8 419 aa31.11■■■□□ 2.57
SPIRE1-202ENST00000409402 SYTL4Q96C24 671 aaPredicted RBP31.11■■■□□ 2.57
SPIRE1-202ENST00000409402 NGEFQ8N5V2 710 aa31.1■■■□□ 2.57
SPIRE1-202ENST00000409402 EIF2S2P20042 333 aaKnown RBP31.09■■■□□ 2.57
SPIRE1-202ENST00000409402 TPM4P67936 248 aa31.09■■■□□ 2.57
SPIRE1-202ENST00000409402 GRIN2BQ13224 1484 aa31.09■■■□□ 2.57
SPIRE1-202ENST00000409402 ZKSCAN2Q63HK3 967 aa31.08■■■□□ 2.57
SPIRE1-202ENST00000409402 SLKQ9H2G2 1235 aaPredicted RBP31.08■■■□□ 2.57
SPIRE1-202ENST00000409402 CSPP1Q1MSJ5 1256 aa31.08■■■□□ 2.57
SPIRE1-202ENST00000409402 KIF3AQ9Y496 699 aa31.07■■■□□ 2.56
SPIRE1-202ENST00000409402 ZNF644Q9H582 1327 aaPredicted RBP31.05■■■□□ 2.56
SPIRE1-202ENST00000409402 NOL8Q76FK4 1167 aaKnown RBP31.04■■■□□ 2.56
SPIRE1-202ENST00000409402 C9orf78Q9NZ63 289 aaPredicted RBP31.04■■■□□ 2.56
SPIRE1-202ENST00000409402 KIF16BQ96L93 1317 aa31.04■■■□□ 2.56
SPIRE1-202ENST00000409402 FGD6Q6ZV73 1430 aa31.04■■■□□ 2.56
SPIRE1-202ENST00000409402 BCL2L13Q9BXK5 485 aa31.04■■■□□ 2.56
SPIRE1-202ENST00000409402 ST18O60284 1047 aa31.03■■■□□ 2.56
SPIRE1-202ENST00000409402 MARCH6O60337 910 aa31.02■■■□□ 2.56
SPIRE1-202ENST00000409402 DDX58O95786 925 aaKnown RBP31.02■■■□□ 2.56
SPIRE1-202ENST00000409402 LRRFIP1Q32MZ4 808 aaKnown RBP31.02■■■□□ 2.56
SPIRE1-202ENST00000409402 ARHGAP5Q13017 1502 aa31.02■■■□□ 2.56
SPIRE1-202ENST00000409402 NOL10Q9BSC4 688 aaKnown RBP31.01■■■□□ 2.56
SPIRE1-202ENST00000409402 RAPGEF4Q8WZA2 1011 aa31.01■■■□□ 2.55
SPIRE1-202ENST00000409402 RILPL2Q969X0 211 aa31.01■■■□□ 2.55
SPIRE1-202ENST00000409402 VPS53Q5VIR6 699 aa31■■■□□ 2.55
SPIRE1-202ENST00000409402 RBM19Q9Y4C8 960 aaKnown RBP31■■■□□ 2.55
SPIRE1-202ENST00000409402 MIA2Q96PC5 1412 aa31■■■□□ 2.55
SPIRE1-202ENST00000409402 PRKRIP1Q9H875 184 aaPredicted RBP30.99■■■□□ 2.55
SPIRE1-202ENST00000409402 RIPK4P57078 832 aa30.98■■■□□ 2.55
SPIRE1-202ENST00000409402 ANKRD45Q5TZF3 282 aa30.98■■■□□ 2.55
SPIRE1-202ENST00000409402 AMOTL1Q8IY63 956 aa30.97■■■□□ 2.55
SPIRE1-202ENST00000409402 ANKRD50Q9ULJ7 1429 aa30.97■■■□□ 2.55
SPIRE1-202ENST00000409402 CHMP4CQ96CF2 233 aa30.97■■■□□ 2.55
SPIRE1-202ENST00000409402 SYNJ2O15056 1496 aa30.97■■■□□ 2.55
SPIRE1-202ENST00000409402 APAF1O14727 1248 aa30.96■■■□□ 2.55
SPIRE1-202ENST00000409402 PRG4Q92954 1404 aaPredicted RBP30.96■■■□□ 2.55
SPIRE1-202ENST00000409402 TRIM34Q9BYJ4 488 aa30.94■■■□□ 2.54
SPIRE1-202ENST00000409402 API5Q9BZZ5 524 aaKnown RBP30.92■■■□□ 2.54
SPIRE1-202ENST00000409402 FYCO1Q9BQS8 1478 aa30.92■■■□□ 2.54
SPIRE1-202ENST00000409402 NECTIN2Q92692 538 aa30.92■■■□□ 2.54
SPIRE1-202ENST00000409402 AKAP17AQ02040 695 aaKnown RBP30.91■■■□□ 2.54
SPIRE1-202ENST00000409402 NLRP2Q9NX02 1062 aa30.91■■■□□ 2.54
SPIRE1-202ENST00000409402 MRC2Q9UBG0 1479 aa30.91■■■□□ 2.54
SPIRE1-202ENST00000409402 GZF1Q9H116 711 aaPredicted RBP30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms