RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 DEPDC5O75140 1603 aa14.84□□□□□ -0.03
SNORD88C-201ENST00000408061 RICTORQ6R327 1708 aa14.83□□□□□ -0.03
SNORD88C-201ENST00000408061 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
SNORD88C-201ENST00000408061 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
SNORD88C-201ENST00000408061 KIF13AQ9H1H9 1805 aa14.82□□□□□ -0.04
SNORD88C-201ENST00000408061 A2MP01023 1474 aa14.82□□□□□ -0.04
SNORD88C-201ENST00000408061 ATP10AO60312 1499 aa14.81□□□□□ -0.04
SNORD88C-201ENST00000408061 ZMYM4Q5VZL5 1548 aa14.81□□□□□ -0.04
SNORD88C-201ENST00000408061 PPRC1Q5VV67 1664 aaKnown RBP14.81□□□□□ -0.04
SNORD88C-201ENST00000408061 VWDEQ8N2E2 1590 aa14.79□□□□□ -0.04
SNORD88C-201ENST00000408061 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.04
SNORD88C-201ENST00000408061 PRDM15P57071 1507 aaPredicted RBP14.77□□□□□ -0.04
SNORD88C-201ENST00000408061 KIF3BO15066 747 aa14.77□□□□□ -0.05
SNORD88C-201ENST00000408061 TSPOAP1O95153 1857 aa14.76□□□□□ -0.05
SNORD88C-201ENST00000408061 RAPGEF3O95398 923 aa14.76□□□□□ -0.05
SNORD88C-201ENST00000408061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
SNORD88C-201ENST00000408061 TET3O43151 1660 aa14.76□□□□□ -0.05
SNORD88C-201ENST00000408061 LMTK2Q8IWU2 1503 aa14.76□□□□□ -0.05
SNORD88C-201ENST00000408061 FOXD1Q16676 465 aa14.75□□□□□ -0.05
SNORD88C-201ENST00000408061 REREQ9P2R6 1566 aa14.75□□□□□ -0.05
SNORD88C-201ENST00000408061 STAC3Q96MF2 364 aa14.74□□□□□ -0.05
SNORD88C-201ENST00000408061 DNAJC5Q9H3Z4 198 aa14.74□□□□□ -0.05
SNORD88C-201ENST00000408061 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
SNORD88C-201ENST00000408061 ABCA6Q8N139 1617 aa14.74□□□□□ -0.05
SNORD88C-201ENST00000408061 DIP2CQ9Y2E4 1556 aa14.73□□□□□ -0.05
SNORD88C-201ENST00000408061 L3MBTL2Q969R5 705 aa14.73□□□□□ -0.05
SNORD88C-201ENST00000408061 CCDC144AA2RUR9 1427 aa14.73□□□□□ -0.05
SNORD88C-201ENST00000408061 FRMPD1Q5SYB0 1578 aa14.73□□□□□ -0.05
SNORD88C-201ENST00000408061 MROH1Q8NDA8 1641 aa14.71□□□□□ -0.05
SNORD88C-201ENST00000408061 PTPRTO14522 1441 aa14.7□□□□□ -0.06
SNORD88C-201ENST00000408061 AGLP35573 1532 aa14.7□□□□□ -0.06
SNORD88C-201ENST00000408061 NEURL4Q96JN8 1562 aa14.68□□□□□ -0.06
SNORD88C-201ENST00000408061 E9PCH4 1651 aa14.68□□□□□ -0.06
SNORD88C-201ENST00000408061 PLA2R1Q13018 1463 aa14.68□□□□□ -0.06
SNORD88C-201ENST00000408061 ZC3H13Q5T200 1668 aaKnown RBP14.68□□□□□ -0.06
SNORD88C-201ENST00000408061 UHRF1BP1Q6BDS2 1440 aa14.66□□□□□ -0.06
SNORD88C-201ENST00000408061 TRPM2O94759 1503 aa14.66□□□□□ -0.06
SNORD88C-201ENST00000408061 EFCAB6Q5THR3 1501 aa14.66□□□□□ -0.06
SNORD88C-201ENST00000408061 SPHKAPQ2M3C7 1700 aa14.66□□□□□ -0.06
SNORD88C-201ENST00000408061 ARHGAP31Q2M1Z3 1444 aa14.65□□□□□ -0.06
SNORD88C-201ENST00000408061 YEATS2Q9ULM3 1422 aa14.65□□□□□ -0.06
SNORD88C-201ENST00000408061 WASHC2CQ9Y4E1 1318 aa14.64□□□□□ -0.07
SNORD88C-201ENST00000408061 DIEXFQ68CQ4 756 aaKnown RBP14.63□□□□□ -0.07
SNORD88C-201ENST00000408061 GGT6Q6P531 493 aa14.63□□□□□ -0.07
SNORD88C-201ENST00000408061 ABCC3O15438 1527 aa14.61□□□□□ -0.07
SNORD88C-201ENST00000408061 ARHGEF40Q8TER5 1519 aa14.61□□□□□ -0.07
SNORD88C-201ENST00000408061 CEP152O94986 1710 aa14.61□□□□□ -0.07
SNORD88C-201ENST00000408061 CNTLNQ9NXG0 1405 aa14.61□□□□□ -0.07
SNORD88C-201ENST00000408061 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
SNORD88C-201ENST00000408061 COL17A1Q9UMD9 1497 aaPredicted RBP14.6□□□□□ -0.07
SNORD88C-201ENST00000408061 SPATA31E1Q6ZUB1 1445 aa14.58□□□□□ -0.07
SNORD88C-201ENST00000408061 CAMSAP1Q5T5Y3 1602 aa14.58□□□□□ -0.08
SNORD88C-201ENST00000408061 KIF1BO60333 1816 aa14.57□□□□□ -0.08
SNORD88C-201ENST00000408061 NBPF8Q3BBV2 869 aa14.57□□□□□ -0.08
SNORD88C-201ENST00000408061 DCAF11Q8TEB1 546 aa14.57□□□□□ -0.08
SNORD88C-201ENST00000408061 NPATQ14207 1427 aa14.57□□□□□ -0.08
SNORD88C-201ENST00000408061 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
SNORD88C-201ENST00000408061 NOS1P29475 1434 aa14.56□□□□□ -0.08
SNORD88C-201ENST00000408061 RALGAPBQ86X10 1494 aa14.56□□□□□ -0.08
SNORD88C-201ENST00000408061 SLC52A1Q9NWF4 448 aa14.55□□□□□ -0.08
SNORD88C-201ENST00000408061 CLTCL1P53675 1640 aa14.55□□□□□ -0.08
SNORD88C-201ENST00000408061 RPGRIP1LQ68CZ1 1315 aa14.54□□□□□ -0.08
SNORD88C-201ENST00000408061 PRAG1Q86YV5 1406 aa14.53□□□□□ -0.08
SNORD88C-201ENST00000408061 RGL3Q3MIN7 710 aa14.51□□□□□ -0.09
SNORD88C-201ENST00000408061 LAMC1P11047 1609 aa14.51□□□□□ -0.09
SNORD88C-201ENST00000408061 GPRASP1Q5JY77 1395 aa14.5□□□□□ -0.09
SNORD88C-201ENST00000408061 ARID4BQ4LE39 1312 aaPredicted RBP14.5□□□□□ -0.09
SNORD88C-201ENST00000408061 HSPA5P11021 654 aaKnown RBP14.5□□□□□ -0.09
SNORD88C-201ENST00000408061 KDM2AQ9Y2K7 1162 aa14.5□□□□□ -0.09
SNORD88C-201ENST00000408061 PIK3C2BO00750 1634 aa14.49□□□□□ -0.09
SNORD88C-201ENST00000408061 TRPM1Q7Z4N2 1603 aa14.49□□□□□ -0.09
SNORD88C-201ENST00000408061 ESF1Q9H501 851 aaKnown RBP14.49□□□□□ -0.09
SNORD88C-201ENST00000408061 MYOM2P54296 1465 aa14.49□□□□□ -0.09
SNORD88C-201ENST00000408061 KIAA1210Q9ULL0 1709 aa14.49□□□□□ -0.09
SNORD88C-201ENST00000408061 ADGRB3O60242 1522 aa14.47□□□□□ -0.09
SNORD88C-201ENST00000408061 CFAP65Q6ZU64 1925 aaKnown RBP14.47□□□□□ -0.09
SNORD88C-201ENST00000408061 PREX1Q8TCU6 1659 aa14.47□□□□□ -0.09
SNORD88C-201ENST00000408061 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
SNORD88C-201ENST00000408061 CARD11Q9BXL7 1154 aa14.47□□□□□ -0.09
SNORD88C-201ENST00000408061 ZNF326Q5BKZ1 582 aaKnown RBP14.46□□□□□ -0.09
SNORD88C-201ENST00000408061 ROCK2O75116 1388 aaKnown RBP14.46□□□□□ -0.1
SNORD88C-201ENST00000408061 POLR1AO95602 1720 aaPredicted RBP14.45□□□□□ -0.1
SNORD88C-201ENST00000408061 SIGLEC1Q9BZZ2 1709 aa14.45□□□□□ -0.1
SNORD88C-201ENST00000408061 IFT172Q9UG01 1749 aa14.45□□□□□ -0.1
SNORD88C-201ENST00000408061 MROH2AA6NES4 1674 aa14.45□□□□□ -0.1
SNORD88C-201ENST00000408061 USP47Q96K76 1375 aa14.45□□□□□ -0.1
SNORD88C-201ENST00000408061 SYNMO15061 1565 aa14.44□□□□□ -0.1
SNORD88C-201ENST00000408061 CLTCQ00610 1675 aaKnown RBP14.44□□□□□ -0.1
SNORD88C-201ENST00000408061 ERVK-7P63135 1459 aa14.44□□□□□ -0.1
SNORD88C-201ENST00000408061 ZFYVE9O95405 1425 aa14.43□□□□□ -0.1
SNORD88C-201ENST00000408061 VGFO15240 615 aaPredicted RBP14.43□□□□□ -0.1
SNORD88C-201ENST00000408061 MADDQ8WXG6 1647 aa14.43□□□□□ -0.1
SNORD88C-201ENST00000408061 NRXN1Q9ULB1 1477 aa14.43□□□□□ -0.1
SNORD88C-201ENST00000408061 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
SNORD88C-201ENST00000408061 IDI1Q13907 227 aa14.41□□□□□ -0.1
SNORD88C-201ENST00000408061 ZMYM3Q14202 1370 aa14.41□□□□□ -0.1
SNORD88C-201ENST00000408061 PPLO60437 1756 aa14.4□□□□□ -0.1
SNORD88C-201ENST00000408061 UGGT1Q9NYU2 1555 aa14.4□□□□□ -0.1
SNORD88C-201ENST00000408061 CCDC7Q96M83 1385 aa14.38□□□□□ -0.11
SNORD88C-201ENST00000408061 CHGAP10645 457 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms