RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
ILF3-202ENST00000407004 NCOA1Q15788 1441 aa17.23■□□□□ 0.35
ILF3-202ENST00000407004 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
ILF3-202ENST00000407004 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
ILF3-202ENST00000407004 TRAPPC8Q9Y2L5 1435 aa17.21■□□□□ 0.35
ILF3-202ENST00000407004 TSPOAP1O95153 1857 aa17.21■□□□□ 0.35
ILF3-202ENST00000407004 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.35
ILF3-202ENST00000407004 CLSPNQ9HAW4 1339 aa17.2■□□□□ 0.34
ILF3-202ENST00000407004 LMTK2Q8IWU2 1503 aa17.2■□□□□ 0.34
ILF3-202ENST00000407004 NAIPQ13075 1403 aa17.19■□□□□ 0.34
ILF3-202ENST00000407004 PRDM15P57071 1507 aaPredicted RBP17.19■□□□□ 0.34
ILF3-202ENST00000407004 A0A0U1RQG5 324 aaPredicted RBP17.19■□□□□ 0.34
ILF3-202ENST00000407004 KDM6BO15054 1643 aa17.19■□□□□ 0.34
ILF3-202ENST00000407004 IQGAP3Q86VI3 1631 aa17.19■□□□□ 0.34
ILF3-202ENST00000407004 FAM69CQ0P6D2 419 aa17.18■□□□□ 0.34
ILF3-202ENST00000407004 ANKRD30AQ9BXX3 1397 aa17.18■□□□□ 0.34
ILF3-202ENST00000407004 MROH1Q8NDA8 1641 aa17.16■□□□□ 0.34
ILF3-202ENST00000407004 KCNH8Q96L42 1107 aa17.14■□□□□ 0.33
ILF3-202ENST00000407004 SETD5Q9C0A6 1442 aa17.13■□□□□ 0.33
ILF3-202ENST00000407004 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
ILF3-202ENST00000407004 ARID3CA6NKF2 412 aa17.13■□□□□ 0.33
ILF3-202ENST00000407004 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
ILF3-202ENST00000407004 ATP10AO60312 1499 aa17.11■□□□□ 0.33
ILF3-202ENST00000407004 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
ILF3-202ENST00000407004 COL17A1Q9UMD9 1497 aaPredicted RBP17.11■□□□□ 0.33
ILF3-202ENST00000407004 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
ILF3-202ENST00000407004 ZNF644Q9H582 1327 aaPredicted RBP17.09■□□□□ 0.33
ILF3-202ENST00000407004 A2MP01023 1474 aa17.09■□□□□ 0.33
ILF3-202ENST00000407004 TET3O43151 1660 aa17.08■□□□□ 0.33
ILF3-202ENST00000407004 RBM19Q9Y4C8 960 aaKnown RBP17.08■□□□□ 0.33
ILF3-202ENST00000407004 PPP6R1Q9UPN7 881 aa17.05■□□□□ 0.32
ILF3-202ENST00000407004 KIF15Q9NS87 1388 aa17.05■□□□□ 0.32
ILF3-202ENST00000407004 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
ILF3-202ENST00000407004 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
ILF3-202ENST00000407004 SPAG9O60271 1321 aaKnown RBP17.04■□□□□ 0.32
ILF3-202ENST00000407004 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
ILF3-202ENST00000407004 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
ILF3-202ENST00000407004 RPRD2Q5VT52 1461 aaKnown RBP17.02■□□□□ 0.31
ILF3-202ENST00000407004 FKBP8Q14318 412 aa17.01■□□□□ 0.31
ILF3-202ENST00000407004 ARHGAP31Q2M1Z3 1444 aa17.01■□□□□ 0.31
ILF3-202ENST00000407004 HNRNPMP52272 730 aaKnown RBP eCLIP17.01■□□□□ 0.319e-7■■■□□ 17.3
ILF3-202ENST00000407004 KDM5AP29375 1690 aaKnown RBP17■□□□□ 0.31
ILF3-202ENST00000407004 FAM50AQ14320 339 aaKnown RBP16.99■□□□□ 0.31
ILF3-202ENST00000407004 PZPP20742 1482 aa16.98■□□□□ 0.31
ILF3-202ENST00000407004 CAMSAP1Q5T5Y3 1602 aa16.98■□□□□ 0.31
ILF3-202ENST00000407004 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
ILF3-202ENST00000407004 RAB3GAP2Q9H2M9 1393 aa16.97■□□□□ 0.31
ILF3-202ENST00000407004 PDE4CQ08493 712 aa16.97■□□□□ 0.31
ILF3-202ENST00000407004 ADAMTSL3P82987 1691 aa16.97■□□□□ 0.31
ILF3-202ENST00000407004 YEATS2Q9ULM3 1422 aa16.95■□□□□ 0.3
ILF3-202ENST00000407004 ITGAEP38570 1179 aa16.95■□□□□ 0.3
ILF3-202ENST00000407004 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
ILF3-202ENST00000407004 ABCC3O15438 1527 aa16.95■□□□□ 0.3
ILF3-202ENST00000407004 E9PCH4 1651 aa16.93■□□□□ 0.3
ILF3-202ENST00000407004 PIK3C2BO00750 1634 aa16.93■□□□□ 0.3
ILF3-202ENST00000407004 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
ILF3-202ENST00000407004 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
ILF3-202ENST00000407004 MSH5O43196 834 aa16.91■□□□□ 0.3
ILF3-202ENST00000407004 AFAP1Q8N556 730 aa16.91■□□□□ 0.3
ILF3-202ENST00000407004 ZNF777Q9ULD5 760 aaPredicted RBP16.91■□□□□ 0.3
ILF3-202ENST00000407004 CEP152O94986 1710 aa16.91■□□□□ 0.3
ILF3-202ENST00000407004 NEFLP07196 543 aa16.91■□□□□ 0.3
ILF3-202ENST00000407004 PDIA4P13667 645 aaKnown RBP16.91■□□□□ 0.3
ILF3-202ENST00000407004 PTPRTO14522 1441 aa16.91■□□□□ 0.3
ILF3-202ENST00000407004 TRPM2O94759 1503 aa16.9■□□□□ 0.3
ILF3-202ENST00000407004 DEKP35659 375 aaKnown RBP16.9■□□□□ 0.3
ILF3-202ENST00000407004 BCL11BQ9C0K0 894 aaPredicted RBP16.89■□□□□ 0.29
ILF3-202ENST00000407004 SPATA31D1Q6ZQQ2 1576 aa16.88■□□□□ 0.29
ILF3-202ENST00000407004 DHX57Q6P158 1386 aaKnown RBP16.87■□□□□ 0.29
ILF3-202ENST00000407004 FER1L4A9Z1Z3 1794 aa16.87■□□□□ 0.29
ILF3-202ENST00000407004 PREX1Q8TCU6 1659 aa16.85■□□□□ 0.29
ILF3-202ENST00000407004 CLTCQ00610 1675 aaKnown RBP16.83■□□□□ 0.28
ILF3-202ENST00000407004 RAPGEF3O95398 923 aa16.83■□□□□ 0.28
ILF3-202ENST00000407004 KANK1Q14678 1352 aa16.83■□□□□ 0.28
ILF3-202ENST00000407004 NOS1P29475 1434 aa16.82■□□□□ 0.28
ILF3-202ENST00000407004 ZNF142P52746 1687 aaPredicted RBP16.81■□□□□ 0.28
ILF3-202ENST00000407004 IFT172Q9UG01 1749 aa16.8■□□□□ 0.28
ILF3-202ENST00000407004 NPATQ14207 1427 aa16.8■□□□□ 0.28
ILF3-202ENST00000407004 C3P01024 1663 aa16.79■□□□□ 0.28
ILF3-202ENST00000407004 TRHP20396 242 aaPredicted RBP16.77■□□□□ 0.28
ILF3-202ENST00000407004 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
ILF3-202ENST00000407004 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
ILF3-202ENST00000407004 SYNMO15061 1565 aa16.76■□□□□ 0.27
ILF3-202ENST00000407004 ANKRD30BQ9BXX2 1392 aa16.76■□□□□ 0.27
ILF3-202ENST00000407004 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
ILF3-202ENST00000407004 ADGRB3O60242 1522 aa16.74■□□□□ 0.27
ILF3-202ENST00000407004 PLA2R1Q13018 1463 aa16.73■□□□□ 0.27
ILF3-202ENST00000407004 ERVK-7P63135 1459 aa16.73■□□□□ 0.27
ILF3-202ENST00000407004 KIF1BO60333 1816 aa16.73■□□□□ 0.27
ILF3-202ENST00000407004 CHIC2Q9UKJ5 165 aa16.73■□□□□ 0.27
ILF3-202ENST00000407004 CLTCL1P53675 1640 aa16.72■□□□□ 0.27
ILF3-202ENST00000407004 NUP155O75694 1391 aa16.72■□□□□ 0.27
ILF3-202ENST00000407004 NBR1Q14596 966 aa16.72■□□□□ 0.27
ILF3-202ENST00000407004 MADDQ8WXG6 1647 aa16.72■□□□□ 0.27
ILF3-202ENST00000407004 KIAA1210Q9ULL0 1709 aa16.71■□□□□ 0.27
ILF3-202ENST00000407004 MPHOSPH9Q99550 1183 aa16.7■□□□□ 0.26
ILF3-202ENST00000407004 IL27Q8NEV9 243 aa16.69■□□□□ 0.26
ILF3-202ENST00000407004 LAMC1P11047 1609 aa16.69■□□□□ 0.26
ILF3-202ENST00000407004 NLRP1Q9C000 1473 aa16.69■□□□□ 0.26
ILF3-202ENST00000407004 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms