RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 MAST1Q9Y2H9 1570 aa20.71■□□□□ 0.91
PRAME-206ENST00000406503 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
PRAME-206ENST00000406503 LRRC9Q6ZRR7 1453 aa20.7■□□□□ 0.9
PRAME-206ENST00000406503 ZNF335Q9H4Z2 1342 aaPredicted RBP20.7■□□□□ 0.9
PRAME-206ENST00000406503 PZPP20742 1482 aa20.69■□□□□ 0.9
PRAME-206ENST00000406503 VPS8Q8N3P4 1428 aa20.69■□□□□ 0.9
PRAME-206ENST00000406503 MROH1Q8NDA8 1641 aa20.67■□□□□ 0.9
PRAME-206ENST00000406503 SPATA31D1Q6ZQQ2 1576 aa20.66■□□□□ 0.9
PRAME-206ENST00000406503 ZC3H13Q5T200 1668 aaKnown RBP20.66■□□□□ 0.9
PRAME-206ENST00000406503 CFAP65Q6ZU64 1925 aaKnown RBP20.65■□□□□ 0.9
PRAME-206ENST00000406503 CEP152O94986 1710 aa20.65■□□□□ 0.9
PRAME-206ENST00000406503 EIF2AK4Q9P2K8 1649 aaKnown RBP20.65■□□□□ 0.9
PRAME-206ENST00000406503 KIF3BO15066 747 aa20.65■□□□□ 0.9
PRAME-206ENST00000406503 PKD2Q13563 968 aa20.65■□□□□ 0.9
PRAME-206ENST00000406503 FBXO31Q5XUX0 539 aaPredicted RBP20.64■□□□□ 0.89
PRAME-206ENST00000406503 MAP3K1Q13233 1512 aa20.63■□□□□ 0.89
PRAME-206ENST00000406503 TNRQ92752 1358 aa20.63■□□□□ 0.89
PRAME-206ENST00000406503 CROCC2H7BZ55 1655 aa20.62■□□□□ 0.89
PRAME-206ENST00000406503 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
PRAME-206ENST00000406503 RSPH4AQ5TD94 716 aa20.61■□□□□ 0.89
PRAME-206ENST00000406503 ILDR2Q71H61 639 aa20.61■□□□□ 0.89
PRAME-206ENST00000406503 ABCC3O15438 1527 aa20.6■□□□□ 0.89
PRAME-206ENST00000406503 DEPDC5O75140 1603 aa20.6■□□□□ 0.89
PRAME-206ENST00000406503 DISP3Q9P2K9 1392 aa20.59■□□□□ 0.89
PRAME-206ENST00000406503 STRCP1A6NGW2 1772 aa20.59■□□□□ 0.89
PRAME-206ENST00000406503 KANK4Q5T7N3 995 aaPredicted RBP20.58■□□□□ 0.89
PRAME-206ENST00000406503 VWDEQ8N2E2 1590 aa20.58■□□□□ 0.88
PRAME-206ENST00000406503 UGGT1Q9NYU2 1555 aa20.57■□□□□ 0.88
PRAME-206ENST00000406503 NLRP1Q9C000 1473 aa20.56■□□□□ 0.88
PRAME-206ENST00000406503 MYOM3Q5VTT5 1437 aa20.56■□□□□ 0.88
PRAME-206ENST00000406503 MIA2Q96PC5 1412 aa20.56■□□□□ 0.88
PRAME-206ENST00000406503 WASHC2CQ9Y4E1 1318 aa20.55■□□□□ 0.88
PRAME-206ENST00000406503 IQGAP1P46940 1657 aa20.55■□□□□ 0.88
PRAME-206ENST00000406503 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
PRAME-206ENST00000406503 TSPY4P0CV99 314 aa20.53■□□□□ 0.88
PRAME-206ENST00000406503 TSPY10P0CW01 314 aa20.53■□□□□ 0.88
PRAME-206ENST00000406503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.53■□□□□ 0.883e-13■■■■■ 30.1
PRAME-206ENST00000406503 MED14O60244 1454 aa20.53■□□□□ 0.88
PRAME-206ENST00000406503 ALKQ9UM73 1620 aa20.53■□□□□ 0.88
PRAME-206ENST00000406503 CPS1P31327 1500 aa20.53■□□□□ 0.88
PRAME-206ENST00000406503 ERVK-7P63135 1459 aa20.51■□□□□ 0.87
PRAME-206ENST00000406503 SHANK2Q9UPX8 1470 aa20.51■□□□□ 0.87
PRAME-206ENST00000406503 PTPN23Q9H3S7 1636 aa20.51■□□□□ 0.87
PRAME-206ENST00000406503 DUOX2Q9NRD8 1548 aa20.51■□□□□ 0.87
PRAME-206ENST00000406503 PRDM15P57071 1507 aaPredicted RBP20.5■□□□□ 0.87
PRAME-206ENST00000406503 UBAP1LF5GYI3 381 aa20.5■□□□□ 0.87
PRAME-206ENST00000406503 NPHP4O75161 1426 aaPredicted RBP20.46■□□□□ 0.87
PRAME-206ENST00000406503 XIRP1Q702N8 1843 aaKnown RBP20.45■□□□□ 0.86
PRAME-206ENST00000406503 ABCC5O15440 1437 aa20.44■□□□□ 0.86
PRAME-206ENST00000406503 THEMISQ8N1K5 641 aaPredicted RBP20.44■□□□□ 0.86
PRAME-206ENST00000406503 ANKLE2Q86XL3 938 aa20.43■□□□□ 0.86
PRAME-206ENST00000406503 SYNMO15061 1565 aa20.42■□□□□ 0.86
PRAME-206ENST00000406503 PIK3C2BO00750 1634 aa20.42■□□□□ 0.86
PRAME-206ENST00000406503 SOCS7O14512 581 aa20.41■□□□□ 0.86
PRAME-206ENST00000406503 ERBINQ96RT1 1412 aa20.41■□□□□ 0.86
PRAME-206ENST00000406503 DAPK1P53355 1430 aa20.4■□□□□ 0.86
PRAME-206ENST00000406503 KIF15Q9NS87 1388 aa20.4■□□□□ 0.86
PRAME-206ENST00000406503 SLIT1O75093 1534 aa20.39■□□□□ 0.85
PRAME-206ENST00000406503 ARHGAP23Q9P227 1491 aa20.39■□□□□ 0.85
PRAME-206ENST00000406503 ARHGAP31Q2M1Z3 1444 aa20.39■□□□□ 0.85
PRAME-206ENST00000406503 MED1Q15648 1581 aaPredicted RBP20.38■□□□□ 0.85
PRAME-206ENST00000406503 FGD6Q6ZV73 1430 aa20.37■□□□□ 0.85
PRAME-206ENST00000406503 KDM5AP29375 1690 aaKnown RBP20.37■□□□□ 0.85
PRAME-206ENST00000406503 LRRC7Q96NW7 1537 aa20.37■□□□□ 0.85
PRAME-206ENST00000406503 HSPA1LP34931 641 aa20.35■□□□□ 0.85
PRAME-206ENST00000406503 SCAF11Q99590 1463 aaKnown RBP20.35■□□□□ 0.85
PRAME-206ENST00000406503 LMTK2Q8IWU2 1503 aa20.33■□□□□ 0.85
PRAME-206ENST00000406503 PIP4K2BP78356 416 aa20.32■□□□□ 0.84
PRAME-206ENST00000406503 RRP7BPQ9NSQ0 103 aa20.32■□□□□ 0.84
PRAME-206ENST00000406503 MYO5BQ9ULV0 1848 aa20.32■□□□□ 0.84
PRAME-206ENST00000406503 TOM1O60784 492 aa20.31■□□□□ 0.84
PRAME-206ENST00000406503 LTKP29376 864 aa20.3■□□□□ 0.84
PRAME-206ENST00000406503 EFCAB6Q5THR3 1501 aa20.29■□□□□ 0.84
PRAME-206ENST00000406503 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
PRAME-206ENST00000406503 ADGRL2O95490 1459 aa20.28■□□□□ 0.84
PRAME-206ENST00000406503 TET3O43151 1660 aa20.25■□□□□ 0.83
PRAME-206ENST00000406503 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.835e-17■■□□□ 11.4
PRAME-206ENST00000406503 NOS1P29475 1434 aa20.24■□□□□ 0.83
PRAME-206ENST00000406503 ANKRD30AQ9BXX3 1397 aa20.23■□□□□ 0.83
PRAME-206ENST00000406503 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
PRAME-206ENST00000406503 ADGRB3O60242 1522 aa20.23■□□□□ 0.83
PRAME-206ENST00000406503 CHIC2Q9UKJ5 165 aa20.23■□□□□ 0.83
PRAME-206ENST00000406503 TXNDC2Q86VQ3 553 aa20.22■□□□□ 0.83
PRAME-206ENST00000406503 GCC2Q8IWJ2 1684 aa20.22■□□□□ 0.83
PRAME-206ENST00000406503 KANK1Q14678 1352 aa20.21■□□□□ 0.83
PRAME-206ENST00000406503 APLP2Q06481 763 aa20.2■□□□□ 0.82
PRAME-206ENST00000406503 UNC13BO14795 1591 aa20.18■□□□□ 0.82
PRAME-206ENST00000406503 NWD1Q149M9 1564 aa20.18■□□□□ 0.82
PRAME-206ENST00000406503 IDI1Q13907 227 aa20.18■□□□□ 0.82
PRAME-206ENST00000406503 CHD2O14647 1828 aaKnown RBP20.17■□□□□ 0.82
PRAME-206ENST00000406503 E9PCH4 1651 aa20.16■□□□□ 0.82
PRAME-206ENST00000406503 TMEM131LA2VDJ0 1609 aa20.15■□□□□ 0.82
PRAME-206ENST00000406503 RPRD2Q5VT52 1461 aaKnown RBP20.13■□□□□ 0.81
PRAME-206ENST00000406503 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
PRAME-206ENST00000406503 EID1Q9Y6B2 187 aa20.13■□□□□ 0.81
PRAME-206ENST00000406503 ROBO1Q9Y6N7 1651 aa20.13■□□□□ 0.81
PRAME-206ENST00000406503 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
PRAME-206ENST00000406503 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
PRAME-206ENST00000406503 IQGAP3Q86VI3 1631 aa20.09■□□□□ 0.81
PRAME-206ENST00000406503 STAG3Q9UJ98 1225 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms