RNA–Protein interactions for RNA: ENST00000405356.5

NOLC1-202, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best) BASIC

Gene NOLC1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-202ENST00000405356 ADCY10Q96PN6 1610 aa11.75□□□□□ -0.53
NOLC1-202ENST00000405356 ANKRD30BQ9BXX2 1392 aa11.74□□□□□ -0.53
NOLC1-202ENST00000405356 CDC42BPAQ5VT25 1732 aa11.74□□□□□ -0.53
NOLC1-202ENST00000405356 SAFB2Q14151 953 aaKnown RBP eCLIP11.74□□□□□ -0.53
NOLC1-202ENST00000405356 NBPF8Q3BBV2 869 aa11.74□□□□□ -0.53
NOLC1-202ENST00000405356 SAMD9LQ8IVG5 1584 aa11.73□□□□□ -0.53
NOLC1-202ENST00000405356 STK26Q9P289 416 aa11.73□□□□□ -0.53
NOLC1-202ENST00000405356 MBD5Q9P267 1494 aa11.72□□□□□ -0.53
NOLC1-202ENST00000405356 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
NOLC1-202ENST00000405356 SHANK2Q9UPX8 1470 aa11.71□□□□□ -0.53
NOLC1-202ENST00000405356 PREX2Q70Z35 1606 aa11.71□□□□□ -0.53
NOLC1-202ENST00000405356 DHX29Q7Z478 1369 aaKnown RBP11.71□□□□□ -0.53
NOLC1-202ENST00000405356 KDM6BO15054 1643 aa11.71□□□□□ -0.54
NOLC1-202ENST00000405356 FAM9BQ8IZU0 186 aa11.7□□□□□ -0.54
NOLC1-202ENST00000405356 ZNF518AQ6AHZ1 1483 aa11.7□□□□□ -0.54
NOLC1-202ENST00000405356 ST20-MTHFSA0A0A6YYL1 179 aa11.7□□□□□ -0.54
NOLC1-202ENST00000405356 POGKQ9P215 609 aa11.69□□□□□ -0.54
NOLC1-202ENST00000405356 DUOX2Q9NRD8 1548 aa11.69□□□□□ -0.54
NOLC1-202ENST00000405356 ADGRL2O95490 1459 aa11.69□□□□□ -0.54
NOLC1-202ENST00000405356 MRS2Q9HD23 443 aa11.68□□□□□ -0.54
NOLC1-202ENST00000405356 USP47Q96K76 1375 aa11.68□□□□□ -0.54
NOLC1-202ENST00000405356 TMF1P82094 1093 aa11.67□□□□□ -0.54
NOLC1-202ENST00000405356 ARHGEF12Q9NZN5 1544 aa11.67□□□□□ -0.54
NOLC1-202ENST00000405356 A2MP01023 1474 aa11.67□□□□□ -0.54
NOLC1-202ENST00000405356 TSPOAP1O95153 1857 aa11.67□□□□□ -0.54
NOLC1-202ENST00000405356 TRAK1Q9UPV9 953 aa11.67□□□□□ -0.54
NOLC1-202ENST00000405356 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
NOLC1-202ENST00000405356 RIMBP3CA6NJZ7 1639 aa11.66□□□□□ -0.54
NOLC1-202ENST00000405356 RIMBP3BA6NNM3 1639 aa11.66□□□□□ -0.54
NOLC1-202ENST00000405356 RIMBP3Q9UFD9 1639 aa11.66□□□□□ -0.54
NOLC1-202ENST00000405356 PZPP20742 1482 aa11.66□□□□□ -0.54
NOLC1-202ENST00000405356 ARHGEF5Q12774 1597 aa11.66□□□□□ -0.54
NOLC1-202ENST00000405356 GCC2Q8IWJ2 1684 aa11.66□□□□□ -0.54
NOLC1-202ENST00000405356 CDC42BPBQ9Y5S2 1711 aa11.66□□□□□ -0.54
NOLC1-202ENST00000405356 HNRNPUQ00839 825 aaKnown RBP eCLIP11.66□□□□□ -0.54
NOLC1-202ENST00000405356 ADGBQ8N7X0 1667 aa11.65□□□□□ -0.54
NOLC1-202ENST00000405356 TEX14Q8IWB6 1497 aa11.65□□□□□ -0.54
NOLC1-202ENST00000405356 SENP3-EIF4A1A0A087X0R7 540 aa11.65□□□□□ -0.54
NOLC1-202ENST00000405356 ATP7AQ04656 1500 aa11.65□□□□□ -0.54
NOLC1-202ENST00000405356 ERBINQ96RT1 1412 aa11.65□□□□□ -0.54
NOLC1-202ENST00000405356 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.55
NOLC1-202ENST00000405356 ABCC1P33527 1531 aa11.64□□□□□ -0.55
NOLC1-202ENST00000405356 FAM135AQ9P2D6 1515 aa11.64□□□□□ -0.55
NOLC1-202ENST00000405356 RTEL1-TNFRSF6BF6WH68 1400 aa11.64□□□□□ -0.55
NOLC1-202ENST00000405356 NBR1Q14596 966 aa11.64□□□□□ -0.55
NOLC1-202ENST00000405356 CDCA8Q53HL2 280 aa11.64□□□□□ -0.55
NOLC1-202ENST00000405356 CFAP70Q5T0N1 1121 aa11.63□□□□□ -0.55
NOLC1-202ENST00000405356 FBXO31Q5XUX0 539 aaPredicted RBP11.63□□□□□ -0.55
NOLC1-202ENST00000405356 VGFO15240 615 aaPredicted RBP11.63□□□□□ -0.55
NOLC1-202ENST00000405356 HDGFP51858 240 aaKnown RBP11.62□□□□□ -0.55
NOLC1-202ENST00000405356 CC2D1BQ5T0F9 858 aaKnown RBP11.62□□□□□ -0.55
NOLC1-202ENST00000405356 TMEM132EQ6IEE7 984 aa11.62□□□□□ -0.55
NOLC1-202ENST00000405356 SALL2Q9Y467 1007 aaPredicted RBP11.62□□□□□ -0.55
NOLC1-202ENST00000405356 POGZQ7Z3K3 1410 aa11.62□□□□□ -0.55
NOLC1-202ENST00000405356 KNSTRNQ9Y448 316 aa11.61□□□□□ -0.55
NOLC1-202ENST00000405356 CFAP65Q6ZU64 1925 aaKnown RBP11.6□□□□□ -0.55
NOLC1-202ENST00000405356 SRPK2P78362 688 aaKnown RBP11.6□□□□□ -0.55
NOLC1-202ENST00000405356 NEO1Q92859 1461 aa11.6□□□□□ -0.55
NOLC1-202ENST00000405356 C14orf37Q86TY3 774 aa11.6□□□□□ -0.55
NOLC1-202ENST00000405356 DEKP35659 375 aaKnown RBP11.59□□□□□ -0.55
NOLC1-202ENST00000405356 YEATS2Q9ULM3 1422 aa11.59□□□□□ -0.55
NOLC1-202ENST00000405356 CEBPAP49715 358 aaPredicted RBP11.59□□□□□ -0.55
NOLC1-202ENST00000405356 WASHC2AQ641Q2 1341 aa11.58□□□□□ -0.56
NOLC1-202ENST00000405356 KIF7Q2M1P5 1343 aa11.58□□□□□ -0.56
NOLC1-202ENST00000405356 IDI1Q13907 227 aa11.58□□□□□ -0.56
NOLC1-202ENST00000405356 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
NOLC1-202ENST00000405356 TNNT2P45379 298 aaPredicted RBP11.57□□□□□ -0.56
NOLC1-202ENST00000405356 EID1Q9Y6B2 187 aa11.57□□□□□ -0.56
NOLC1-202ENST00000405356 EIF3AQ14152 1382 aaKnown RBP11.57□□□□□ -0.56
NOLC1-202ENST00000405356 SLC52A1Q9NWF4 448 aa11.57□□□□□ -0.56
NOLC1-202ENST00000405356 ABCA9Q8IUA7 1624 aa11.57□□□□□ -0.56
NOLC1-202ENST00000405356 B4GALNT3Q6L9W6 998 aa11.57□□□□□ -0.56
NOLC1-202ENST00000405356 CCDC7Q96M83 1385 aa11.56□□□□□ -0.56
NOLC1-202ENST00000405356 CFAP74Q9C0B2 1584 aa11.55□□□□□ -0.56
NOLC1-202ENST00000405356 ADGRF5Q8IZF2 1346 aa11.54□□□□□ -0.56
NOLC1-202ENST00000405356 STAC3Q96MF2 364 aa11.54□□□□□ -0.56
NOLC1-202ENST00000405356 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
NOLC1-202ENST00000405356 CROCC2H7BZ55 1655 aa11.54□□□□□ -0.56
NOLC1-202ENST00000405356 PRKCSHP14314 528 aaPredicted RBP11.53□□□□□ -0.56
NOLC1-202ENST00000405356 ZFYVE16Q7Z3T8 1539 aa11.53□□□□□ -0.56
NOLC1-202ENST00000405356 ARAP3Q8WWN8 1544 aa11.53□□□□□ -0.56
NOLC1-202ENST00000405356 NUTM2FA1L443 756 aa11.53□□□□□ -0.56
NOLC1-202ENST00000405356 C11orf95C9JLR9 678 aaPredicted RBP11.52□□□□□ -0.56
NOLC1-202ENST00000405356 CCER2I3L3R5 266 aa11.52□□□□□ -0.56
NOLC1-202ENST00000405356 SLC24A1O60721 1099 aa11.52□□□□□ -0.57
NOLC1-202ENST00000405356 PANK3Q9H999 370 aa11.52□□□□□ -0.57
NOLC1-202ENST00000405356 FANCIQ9NVI1 1328 aa11.52□□□□□ -0.57
NOLC1-202ENST00000405356 MAST1Q9Y2H9 1570 aa11.52□□□□□ -0.57
NOLC1-202ENST00000405356 WDR43Q15061 677 aaKnown RBP eCLIP11.52□□□□□ -0.57
NOLC1-202ENST00000405356 ATP10AO60312 1499 aa11.51□□□□□ -0.57
NOLC1-202ENST00000405356 CENPJQ9HC77 1338 aaPredicted RBP11.51□□□□□ -0.57
NOLC1-202ENST00000405356 MLH3Q9UHC1 1453 aa11.5□□□□□ -0.57
NOLC1-202ENST00000405356 NOS1P29475 1434 aa11.5□□□□□ -0.57
NOLC1-202ENST00000405356 TXNDC2Q86VQ3 553 aa11.5□□□□□ -0.57
NOLC1-202ENST00000405356 PPM1GO15355 546 aaPredicted RBP11.5□□□□□ -0.57
NOLC1-202ENST00000405356 HECW2Q9P2P5 1572 aa11.49□□□□□ -0.57
NOLC1-202ENST00000405356 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.49□□□□□ -0.57
NOLC1-202ENST00000405356 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
NOLC1-202ENST00000405356 KTN1Q86UP2 1357 aaKnown RBP11.48□□□□□ -0.57
NOLC1-202ENST00000405356 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms