RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 DEPDC5O75140 1603 aa21.57■■□□□ 1.04
VAMP2-202ENST00000404970 ANKRD30AQ9BXX3 1397 aa21.57■■□□□ 1.04
VAMP2-202ENST00000404970 GGT6Q6P531 493 aa21.57■■□□□ 1.04
VAMP2-202ENST00000404970 ERBINQ96RT1 1412 aa21.56■■□□□ 1.04
VAMP2-202ENST00000404970 CEP152O94986 1710 aa21.55■■□□□ 1.04
VAMP2-202ENST00000404970 CEBPAP49715 358 aaPredicted RBP21.55■■□□□ 1.04
VAMP2-202ENST00000404970 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
VAMP2-202ENST00000404970 PRDM15P57071 1507 aaPredicted RBP21.54■■□□□ 1.04
VAMP2-202ENST00000404970 KDM5DQ9BY66 1539 aa21.54■■□□□ 1.04
VAMP2-202ENST00000404970 CNTLNQ9NXG0 1405 aa21.53■■□□□ 1.04
VAMP2-202ENST00000404970 ITGAEP38570 1179 aa21.52■■□□□ 1.04
VAMP2-202ENST00000404970 ABCC3O15438 1527 aa21.51■■□□□ 1.03
VAMP2-202ENST00000404970 FAM135AQ9P2D6 1515 aa21.51■■□□□ 1.03
VAMP2-202ENST00000404970 ROCK1Q13464 1354 aa21.51■■□□□ 1.03
VAMP2-202ENST00000404970 ZC3H13Q5T200 1668 aaKnown RBP21.5■■□□□ 1.03
VAMP2-202ENST00000404970 PREX1Q8TCU6 1659 aa21.48■■□□□ 1.03
VAMP2-202ENST00000404970 LMTK3Q96Q04 1460 aa21.48■■□□□ 1.03
VAMP2-202ENST00000404970 VWDEQ8N2E2 1590 aa21.48■■□□□ 1.03
VAMP2-202ENST00000404970 ZMYM3Q14202 1370 aa21.47■■□□□ 1.03
VAMP2-202ENST00000404970 CAMSAP1Q5T5Y3 1602 aa21.47■■□□□ 1.03
VAMP2-202ENST00000404970 GCC2Q8IWJ2 1684 aa21.46■■□□□ 1.03
VAMP2-202ENST00000404970 ANKRD50Q9ULJ7 1429 aa21.46■■□□□ 1.03
VAMP2-202ENST00000404970 UNC13BO14795 1591 aa21.45■■□□□ 1.02
VAMP2-202ENST00000404970 ESF1Q9H501 851 aaKnown RBP21.45■■□□□ 1.02
VAMP2-202ENST00000404970 PPP6R1Q9UPN7 881 aa21.44■■□□□ 1.02
VAMP2-202ENST00000404970 PZPP20742 1482 aa21.41■■□□□ 1.02
VAMP2-202ENST00000404970 MYO3AQ8NEV4 1616 aa21.41■■□□□ 1.02
VAMP2-202ENST00000404970 SETD1BQ9UPS6 1966 aaKnown RBP21.41■■□□□ 1.02
VAMP2-202ENST00000404970 WASHC2CQ9Y4E1 1318 aa21.4■■□□□ 1.02
VAMP2-202ENST00000404970 NPATQ14207 1427 aa21.4■■□□□ 1.02
VAMP2-202ENST00000404970 NAIPQ13075 1403 aa21.39■■□□□ 1.01
VAMP2-202ENST00000404970 LMTK2Q8IWU2 1503 aa21.38■■□□□ 1.01
VAMP2-202ENST00000404970 CFAP65Q6ZU64 1925 aaKnown RBP21.38■■□□□ 1.01
VAMP2-202ENST00000404970 ZNF142P52746 1687 aaPredicted RBP21.37■■□□□ 1.01
VAMP2-202ENST00000404970 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.37■■□□□ 1.01
VAMP2-202ENST00000404970 FBXO31Q5XUX0 539 aaPredicted RBP21.36■■□□□ 1.01
VAMP2-202ENST00000404970 IQGAP3Q86VI3 1631 aa21.35■■□□□ 1.01
VAMP2-202ENST00000404970 EFCAB6Q5THR3 1501 aa21.35■■□□□ 1.01
VAMP2-202ENST00000404970 SPATA31D1Q6ZQQ2 1576 aa21.34■■□□□ 1.01
VAMP2-202ENST00000404970 HFM1A2PYH4 1435 aa21.34■■□□□ 1.01
VAMP2-202ENST00000404970 TET3O43151 1660 aa21.33■■□□□ 1.01
VAMP2-202ENST00000404970 ERVK-7P63135 1459 aa21.33■■□□□ 1
VAMP2-202ENST00000404970 UHRF1BP1Q6BDS2 1440 aa21.32■■□□□ 1
VAMP2-202ENST00000404970 HSPA2P54652 639 aa21.32■■□□□ 1
VAMP2-202ENST00000404970 ARHGAP31Q2M1Z3 1444 aa21.31■■□□□ 1
VAMP2-202ENST00000404970 CEP170BQ9Y4F5 1589 aaPredicted RBP21.31■■□□□ 1
VAMP2-202ENST00000404970 KANK1Q14678 1352 aa21.3■■□□□ 1
VAMP2-202ENST00000404970 E9PCH4 1651 aa21.29■■□□□ 1
VAMP2-202ENST00000404970 TNRQ92752 1358 aa21.28■■□□□ 1
VAMP2-202ENST00000404970 STRCQ7RTU9 1775 aa21.28■■□□□ 1
VAMP2-202ENST00000404970 SYNMO15061 1565 aa21.27■■□□□ 1
VAMP2-202ENST00000404970 A2ML1A8K2U0 1454 aa21.24■□□□□ 0.99
VAMP2-202ENST00000404970 NUP155O75694 1391 aa21.22■□□□□ 0.99
VAMP2-202ENST00000404970 NOS1P29475 1434 aa21.21■□□□□ 0.99
VAMP2-202ENST00000404970 UBR1Q8IWV7 1749 aa21.21■□□□□ 0.99
VAMP2-202ENST00000404970 PIK3C2BO00750 1634 aa21.2■□□□□ 0.98
VAMP2-202ENST00000404970 NLRP1Q9C000 1473 aa21.2■□□□□ 0.98
VAMP2-202ENST00000404970 RPRD2Q5VT52 1461 aaKnown RBP21.19■□□□□ 0.98
VAMP2-202ENST00000404970 UGGT1Q9NYU2 1555 aa21.16■□□□□ 0.98
VAMP2-202ENST00000404970 SPHKAPQ2M3C7 1700 aa21.15■□□□□ 0.98
VAMP2-202ENST00000404970 MYO5BQ9ULV0 1848 aa21.14■□□□□ 0.98
VAMP2-202ENST00000404970 POLR1AO95602 1720 aaPredicted RBP21.14■□□□□ 0.97
VAMP2-202ENST00000404970 SETD5Q9C0A6 1442 aa21.13■□□□□ 0.97
VAMP2-202ENST00000404970 PLA2R1Q13018 1463 aa21.12■□□□□ 0.97
VAMP2-202ENST00000404970 NEURL4Q96JN8 1562 aa21.11■□□□□ 0.97
VAMP2-202ENST00000404970 KDM5AP29375 1690 aaKnown RBP21.11■□□□□ 0.97
VAMP2-202ENST00000404970 RAB3GAP2Q9H2M9 1393 aa21.09■□□□□ 0.97
VAMP2-202ENST00000404970 ADGRB3O60242 1522 aa21.09■□□□□ 0.97
VAMP2-202ENST00000404970 TRIM52Q96A61 297 aa21.07■□□□□ 0.96
VAMP2-202ENST00000404970 TMEM131LA2VDJ0 1609 aa21.07■□□□□ 0.96
VAMP2-202ENST00000404970 PTPRTO14522 1441 aa21.07■□□□□ 0.96
VAMP2-202ENST00000404970 IDI1Q13907 227 aa21.07■□□□□ 0.96
VAMP2-202ENST00000404970 NCKAP5LQ9HCH0 1330 aa21.06■□□□□ 0.96
VAMP2-202ENST00000404970 CLTCL1P53675 1640 aa21.06■□□□□ 0.96
VAMP2-202ENST00000404970 ARHGAP23Q9P227 1491 aa21.05■□□□□ 0.96
VAMP2-202ENST00000404970 SLIT1O75093 1534 aa21.04■□□□□ 0.96
VAMP2-202ENST00000404970 TRPM2O94759 1503 aa21.04■□□□□ 0.96
VAMP2-202ENST00000404970 PKD2Q13563 968 aa21.01■□□□□ 0.95
VAMP2-202ENST00000404970 FOXD1Q16676 465 aa21■□□□□ 0.95
VAMP2-202ENST00000404970 THEMISQ8N1K5 641 aaPredicted RBP21■□□□□ 0.95
VAMP2-202ENST00000404970 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
VAMP2-202ENST00000404970 IQGAP1P46940 1657 aa20.99■□□□□ 0.95
VAMP2-202ENST00000404970 SLC52A1Q9NWF4 448 aa20.99■□□□□ 0.95
VAMP2-202ENST00000404970 MED14O60244 1454 aa20.97■□□□□ 0.95
VAMP2-202ENST00000404970 TMEM2Q9UHN6 1383 aa20.97■□□□□ 0.95
VAMP2-202ENST00000404970 MPHOSPH9Q99550 1183 aa20.96■□□□□ 0.95
VAMP2-202ENST00000404970 SCAF11Q99590 1463 aaKnown RBP20.96■□□□□ 0.95
VAMP2-202ENST00000404970 LTKP29376 864 aa20.95■□□□□ 0.94
VAMP2-202ENST00000404970 ZFYVE9O95405 1425 aa20.95■□□□□ 0.94
VAMP2-202ENST00000404970 KIF1BO60333 1816 aa20.94■□□□□ 0.94
VAMP2-202ENST00000404970 NPHP4O75161 1426 aaPredicted RBP20.93■□□□□ 0.94
VAMP2-202ENST00000404970 ANKLE2Q86XL3 938 aa20.92■□□□□ 0.94
VAMP2-202ENST00000404970 LTBP4Q8N2S1 1624 aa20.91■□□□□ 0.94
VAMP2-202ENST00000404970 STAG3Q9UJ98 1225 aa20.9■□□□□ 0.94
VAMP2-202ENST00000404970 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
VAMP2-202ENST00000404970 STRCP1A6NGW2 1772 aa20.89■□□□□ 0.94
VAMP2-202ENST00000404970 RIMS2Q9UQ26 1411 aa20.89■□□□□ 0.93
VAMP2-202ENST00000404970 HRCP23327 699 aa20.88■□□□□ 0.93
VAMP2-202ENST00000404970 CHGAP10645 457 aaKnown RBP20.88■□□□□ 0.93
VAMP2-202ENST00000404970 TXNDC2Q86VQ3 553 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms