RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CAMSAP1Q5T5Y3 1602 aa24.17■■□□□ 1.46
TPM1-207ENST00000403994 TSPY4P0CV99 314 aa24.17■■□□□ 1.46
TPM1-207ENST00000403994 TSPY10P0CW01 314 aa24.17■■□□□ 1.46
TPM1-207ENST00000403994 ZC3H13Q5T200 1668 aaKnown RBP24.16■■□□□ 1.46
TPM1-207ENST00000403994 KIF3BO15066 747 aa24.16■■□□□ 1.46
TPM1-207ENST00000403994 APLP2Q06481 763 aa24.16■■□□□ 1.46
TPM1-207ENST00000403994 DNMT1P26358 1616 aaKnown RBP24.16■■□□□ 1.46
TPM1-207ENST00000403994 FGD6Q6ZV73 1430 aa24.15■■□□□ 1.46
TPM1-207ENST00000403994 PZPP20742 1482 aa24.14■■□□□ 1.46
TPM1-207ENST00000403994 MROH1Q8NDA8 1641 aa24.14■■□□□ 1.46
TPM1-207ENST00000403994 FBXO41Q8TF61 875 aa24.14■■□□□ 1.45
TPM1-207ENST00000403994 TCOF1Q13428 1488 aaKnown RBP24.13■■□□□ 1.45
TPM1-207ENST00000403994 PTPRTO14522 1441 aa24.12■■□□□ 1.45
TPM1-207ENST00000403994 DUOX2Q9NRD8 1548 aa24.11■■□□□ 1.45
TPM1-207ENST00000403994 ABCC3O15438 1527 aa24.1■■□□□ 1.45
TPM1-207ENST00000403994 PLA2R1Q13018 1463 aa24.1■■□□□ 1.45
TPM1-207ENST00000403994 ABCC5O15440 1437 aa24.1■■□□□ 1.45
TPM1-207ENST00000403994 DMRT2Q9Y5R5 561 aa24.09■■□□□ 1.45
TPM1-207ENST00000403994 A2ML1A8K2U0 1454 aa24.08■■□□□ 1.45
TPM1-207ENST00000403994 CEP152O94986 1710 aa24.08■■□□□ 1.45
TPM1-207ENST00000403994 DAPK1P53355 1430 aa24.08■■□□□ 1.44
TPM1-207ENST00000403994 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
TPM1-207ENST00000403994 KIF15Q9NS87 1388 aa24.05■■□□□ 1.44
TPM1-207ENST00000403994 WASHC2CQ9Y4E1 1318 aa24.05■■□□□ 1.44
TPM1-207ENST00000403994 TNRQ92752 1358 aa24.04■■□□□ 1.44
TPM1-207ENST00000403994 DEPDC5O75140 1603 aa24.03■■□□□ 1.44
TPM1-207ENST00000403994 ERBINQ96RT1 1412 aa24.03■■□□□ 1.44
TPM1-207ENST00000403994 CERKQ8TCT0 537 aa24.03■■□□□ 1.44
TPM1-207ENST00000403994 POLR1AO95602 1720 aaPredicted RBP24.03■■□□□ 1.44
TPM1-207ENST00000403994 LTBP4Q8N2S1 1624 aa24.01■■□□□ 1.43
TPM1-207ENST00000403994 SPATA31D1Q6ZQQ2 1576 aa24■■□□□ 1.43
TPM1-207ENST00000403994 FBXO31Q5XUX0 539 aaPredicted RBP24■■□□□ 1.43
TPM1-207ENST00000403994 NLRP1Q9C000 1473 aa23.98■■□□□ 1.43
TPM1-207ENST00000403994 NEURL4Q96JN8 1562 aa23.96■■□□□ 1.43
TPM1-207ENST00000403994 ERVK-7P63135 1459 aa23.96■■□□□ 1.43
TPM1-207ENST00000403994 NCKAP5LQ9HCH0 1330 aa23.95■■□□□ 1.42
TPM1-207ENST00000403994 ADGRL2O95490 1459 aa23.94■■□□□ 1.42
TPM1-207ENST00000403994 PKD2Q13563 968 aa23.93■■□□□ 1.42
TPM1-207ENST00000403994 UGGT1Q9NYU2 1555 aa23.93■■□□□ 1.42
TPM1-207ENST00000403994 RRP7BPQ9NSQ0 103 aa23.92■■□□□ 1.42
TPM1-207ENST00000403994 ANKRD30AQ9BXX3 1397 aa23.91■■□□□ 1.42
TPM1-207ENST00000403994 CFAP65Q6ZU64 1925 aaKnown RBP23.9■■□□□ 1.42
TPM1-207ENST00000403994 VWDEQ8N2E2 1590 aa23.9■■□□□ 1.42
TPM1-207ENST00000403994 IQSEC2Q5JU85 1478 aa23.89■■□□□ 1.42
TPM1-207ENST00000403994 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
TPM1-207ENST00000403994 ARHGAP31Q2M1Z3 1444 aa23.87■■□□□ 1.41
TPM1-207ENST00000403994 CHIC2Q9UKJ5 165 aa23.87■■□□□ 1.41
TPM1-207ENST00000403994 LMTK2Q8IWU2 1503 aa23.86■■□□□ 1.41
TPM1-207ENST00000403994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.85■■□□□ 1.411e-7■■□□□ 13.6
TPM1-207ENST00000403994 ZNF335Q9H4Z2 1342 aaPredicted RBP23.84■■□□□ 1.41
TPM1-207ENST00000403994 FAM50AQ14320 339 aaKnown RBP23.84■■□□□ 1.41
TPM1-207ENST00000403994 EFCAB6Q5THR3 1501 aa23.83■■□□□ 1.41
TPM1-207ENST00000403994 IQGAP1P46940 1657 aa23.83■■□□□ 1.4
TPM1-207ENST00000403994 KANK1Q14678 1352 aa23.81■■□□□ 1.4
TPM1-207ENST00000403994 MED14O60244 1454 aa23.8■■□□□ 1.4
TPM1-207ENST00000403994 PIK3C2BO00750 1634 aa23.78■■□□□ 1.4
TPM1-207ENST00000403994 THEMISQ8N1K5 641 aaPredicted RBP23.78■■□□□ 1.4
TPM1-207ENST00000403994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.78■■□□□ 1.49e-7■■■□□ 19
TPM1-207ENST00000403994 ANKRD50Q9ULJ7 1429 aa23.77■■□□□ 1.4
TPM1-207ENST00000403994 UNC13BO14795 1591 aa23.77■■□□□ 1.4
TPM1-207ENST00000403994 SYNMO15061 1565 aa23.77■■□□□ 1.4
TPM1-207ENST00000403994 KDM5AP29375 1690 aaKnown RBP23.76■■□□□ 1.39
TPM1-207ENST00000403994 NPHP4O75161 1426 aaPredicted RBP23.76■■□□□ 1.39
TPM1-207ENST00000403994 ANKLE2Q86XL3 938 aa23.74■■□□□ 1.39
TPM1-207ENST00000403994 SLIT1O75093 1534 aa23.74■■□□□ 1.39
TPM1-207ENST00000403994 TET3O43151 1660 aa23.73■■□□□ 1.39
TPM1-207ENST00000403994 ARHGAP23Q9P227 1491 aa23.73■■□□□ 1.39
TPM1-207ENST00000403994 CPS1P31327 1500 aa23.73■■□□□ 1.39
TPM1-207ENST00000403994 GCC2Q8IWJ2 1684 aa23.72■■□□□ 1.39
TPM1-207ENST00000403994 SCAF11Q99590 1463 aaKnown RBP23.7■■□□□ 1.38
TPM1-207ENST00000403994 ROCK1Q13464 1354 aa23.7■■□□□ 1.38
TPM1-207ENST00000403994 NOS1P29475 1434 aa23.68■■□□□ 1.38
TPM1-207ENST00000403994 ADGRB3O60242 1522 aa23.68■■□□□ 1.38
TPM1-207ENST00000403994 RPRD2Q5VT52 1461 aaKnown RBP23.68■■□□□ 1.38
TPM1-207ENST00000403994 STRCP1A6NGW2 1772 aa23.68■■□□□ 1.38
TPM1-207ENST00000403994 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
TPM1-207ENST00000403994 PPARGC1BQ86YN6 1023 aaKnown RBP23.65■■□□□ 1.38
TPM1-207ENST00000403994 E9PCH4 1651 aa23.63■■□□□ 1.37
TPM1-207ENST00000403994 MYO5BQ9ULV0 1848 aa23.6■■□□□ 1.37
TPM1-207ENST00000403994 TMEM2Q9UHN6 1383 aa23.6■■□□□ 1.37
TPM1-207ENST00000403994 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
TPM1-207ENST00000403994 UBAP1LF5GYI3 381 aa23.58■■□□□ 1.37
TPM1-207ENST00000403994 LTKP29376 864 aa23.58■■□□□ 1.37
TPM1-207ENST00000403994 IDI1Q13907 227 aa23.56■■□□□ 1.36
TPM1-207ENST00000403994 ITGAEP38570 1179 aa23.55■■□□□ 1.36
TPM1-207ENST00000403994 LRRC7Q96NW7 1537 aa23.54■■□□□ 1.36
TPM1-207ENST00000403994 TXNDC2Q86VQ3 553 aa23.54■■□□□ 1.36
TPM1-207ENST00000403994 TMEM131LA2VDJ0 1609 aa23.54■■□□□ 1.36
TPM1-207ENST00000403994 ALKQ9UM73 1620 aa23.54■■□□□ 1.36
TPM1-207ENST00000403994 STAG3Q9UJ98 1225 aa23.53■■□□□ 1.36
TPM1-207ENST00000403994 EID1Q9Y6B2 187 aa23.52■■□□□ 1.36
TPM1-207ENST00000403994 SLC52A1Q9NWF4 448 aa23.51■■□□□ 1.35
TPM1-207ENST00000403994 XIRP1Q702N8 1843 aaKnown RBP23.51■■□□□ 1.35
TPM1-207ENST00000403994 ZFYVE9O95405 1425 aa23.49■■□□□ 1.35
TPM1-207ENST00000403994 SPHKAPQ2M3C7 1700 aa23.47■■□□□ 1.35
TPM1-207ENST00000403994 NUP155O75694 1391 aa23.47■■□□□ 1.35
TPM1-207ENST00000403994 NWD1Q149M9 1564 aa23.46■■□□□ 1.35
TPM1-207ENST00000403994 NAIPQ13075 1403 aa23.42■■□□□ 1.34
TPM1-207ENST00000403994 TOM1O60784 492 aa23.42■■□□□ 1.34
TPM1-207ENST00000403994 RIMS2Q9UQ26 1411 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms