RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CCDC7Q96M83 1385 aa27.35■■□□□ 1.97
CCDC47-202ENST00000403162 POLR1AO95602 1720 aaPredicted RBP27.34■■□□□ 1.97
CCDC47-202ENST00000403162 ANKRD30BQ9BXX2 1392 aa27.34■■□□□ 1.97
CCDC47-202ENST00000403162 TRHP20396 242 aaPredicted RBP27.33■■□□□ 1.97
CCDC47-202ENST00000403162 MAST1Q9Y2H9 1570 aa27.33■■□□□ 1.97
CCDC47-202ENST00000403162 SPAG9O60271 1321 aaKnown RBP27.32■■□□□ 1.96
CCDC47-202ENST00000403162 ZNF518AQ6AHZ1 1483 aa27.29■■□□□ 1.96
CCDC47-202ENST00000403162 POGZQ7Z3K3 1410 aa27.29■■□□□ 1.96
CCDC47-202ENST00000403162 PRKRIP1Q9H875 184 aaPredicted RBP27.28■■□□□ 1.96
CCDC47-202ENST00000403162 KIF15Q9NS87 1388 aa27.28■■□□□ 1.96
CCDC47-202ENST00000403162 MYT1LQ9UL68 1186 aa27.28■■□□□ 1.96
CCDC47-202ENST00000403162 C11orf95C9JLR9 678 aaPredicted RBP27.26■■□□□ 1.96
CCDC47-202ENST00000403162 RAPGEF3O95398 923 aa27.26■■□□□ 1.95
CCDC47-202ENST00000403162 SPATA31E1Q6ZUB1 1445 aa27.25■■□□□ 1.95
CCDC47-202ENST00000403162 RTEL1-TNFRSF6BF6WH68 1400 aa27.24■■□□□ 1.95
CCDC47-202ENST00000403162 FOXD1Q16676 465 aa27.24■■□□□ 1.95
CCDC47-202ENST00000403162 CCDC184Q52MB2 194 aa27.24■■□□□ 1.95
CCDC47-202ENST00000403162 ZFYVE16Q7Z3T8 1539 aa27.24■■□□□ 1.95
CCDC47-202ENST00000403162 PLXNC1O60486 1568 aa27.22■■□□□ 1.95
CCDC47-202ENST00000403162 NBPF8Q3BBV2 869 aa27.22■■□□□ 1.95
CCDC47-202ENST00000403162 ATP7AQ04656 1500 aa27.22■■□□□ 1.95
CCDC47-202ENST00000403162 ANKRD50Q9ULJ7 1429 aa27.21■■□□□ 1.95
CCDC47-202ENST00000403162 KDM5CP41229 1560 aa27.21■■□□□ 1.95
CCDC47-202ENST00000403162 INO80Q9ULG1 1556 aaPredicted RBP27.21■■□□□ 1.95
CCDC47-202ENST00000403162 FANCIQ9NVI1 1328 aa27.2■■□□□ 1.94
CCDC47-202ENST00000403162 ZBED9Q6R2W3 1325 aa27.19■■□□□ 1.94
CCDC47-202ENST00000403162 IRX6P78412 446 aaPredicted RBP27.19■■□□□ 1.94
CCDC47-202ENST00000403162 PPP4R2Q9NY27 417 aa27.18■■□□□ 1.94
CCDC47-202ENST00000403162 RICTORQ6R327 1708 aa27.18■■□□□ 1.94
CCDC47-202ENST00000403162 KIF7Q2M1P5 1343 aa27.16■■□□□ 1.94
CCDC47-202ENST00000403162 MRS2Q9HD23 443 aa27.15■■□□□ 1.94
CCDC47-202ENST00000403162 DUOX2Q9NRD8 1548 aa27.15■■□□□ 1.94
CCDC47-202ENST00000403162 MLH3Q9UHC1 1453 aa27.15■■□□□ 1.94
CCDC47-202ENST00000403162 HECW2Q9P2P5 1572 aa27.14■■□□□ 1.94
CCDC47-202ENST00000403162 KIDINS220Q9ULH0 1771 aa27.14■■□□□ 1.94
CCDC47-202ENST00000403162 SLC4A1APQ9BWU0 796 aaKnown RBP27.14■■□□□ 1.93
CCDC47-202ENST00000403162 FRMPD1Q5SYB0 1578 aa27.13■■□□□ 1.93
CCDC47-202ENST00000403162 PZPP20742 1482 aa27.13■■□□□ 1.93
CCDC47-202ENST00000403162 MSH5O43196 834 aa27.12■■□□□ 1.93
CCDC47-202ENST00000403162 FAM9BQ8IZU0 186 aa27.11■■□□□ 1.93
CCDC47-202ENST00000403162 COL17A1Q9UMD9 1497 aaPredicted RBP27.09■■□□□ 1.93
CCDC47-202ENST00000403162 ERBINQ96RT1 1412 aa27.07■■□□□ 1.92
CCDC47-202ENST00000403162 ZMYM4Q5VZL5 1548 aa27.05■■□□□ 1.92
CCDC47-202ENST00000403162 DHX29Q7Z478 1369 aaKnown RBP27.04■■□□□ 1.92
CCDC47-202ENST00000403162 ABCA6Q8N139 1617 aa27.04■■□□□ 1.92
CCDC47-202ENST00000403162 A2MP01023 1474 aa27.02■■□□□ 1.92
CCDC47-202ENST00000403162 YEATS2Q9ULM3 1422 aa27.02■■□□□ 1.92
CCDC47-202ENST00000403162 NUP155O75694 1391 aa26.99■■□□□ 1.91
CCDC47-202ENST00000403162 MAGI2Q86UL8 1455 aa26.99■■□□□ 1.91
CCDC47-202ENST00000403162 DIP2CQ9Y2E4 1556 aa26.99■■□□□ 1.91
CCDC47-202ENST00000403162 BCORL1Q5H9F3 1711 aa26.99■■□□□ 1.91
CCDC47-202ENST00000403162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.98■■□□□ 1.912e-7■■□□□ 13.9
CCDC47-202ENST00000403162 ARID4BQ4LE39 1312 aaPredicted RBP26.97■■□□□ 1.91
CCDC47-202ENST00000403162 KIF3BO15066 747 aa26.97■■□□□ 1.91
CCDC47-202ENST00000403162 SMG6Q86US8 1419 aaKnown RBP26.96■■□□□ 1.91
CCDC47-202ENST00000403162 USP47Q96K76 1375 aa26.95■■□□□ 1.9
CCDC47-202ENST00000403162 UNC13BO14795 1591 aa26.94■■□□□ 1.9
CCDC47-202ENST00000403162 EIF2AK4Q9P2K8 1649 aaKnown RBP26.93■■□□□ 1.9
CCDC47-202ENST00000403162 KDM5DQ9BY66 1539 aa26.92■■□□□ 1.9
CCDC47-202ENST00000403162 UHRF1BP1Q6BDS2 1440 aa26.91■■□□□ 1.9
CCDC47-202ENST00000403162 ATP10AO60312 1499 aa26.9■■□□□ 1.9
CCDC47-202ENST00000403162 B4GALNT3Q6L9W6 998 aa26.9■■□□□ 1.9
CCDC47-202ENST00000403162 RALGAPBQ86X10 1494 aa26.88■■□□□ 1.89
CCDC47-202ENST00000403162 FAM135AQ9P2D6 1515 aa26.87■■□□□ 1.89
CCDC47-202ENST00000403162 ROCK2O75116 1388 aaKnown RBP26.86■■□□□ 1.89
CCDC47-202ENST00000403162 ARHGEF40Q8TER5 1519 aa26.86■■□□□ 1.89
CCDC47-202ENST00000403162 DEPDC5O75140 1603 aa26.86■■□□□ 1.89
CCDC47-202ENST00000403162 PKD2Q13563 968 aa26.86■■□□□ 1.89
CCDC47-202ENST00000403162 RNF123Q5XPI4 1314 aa26.86■■□□□ 1.89
CCDC47-202ENST00000403162 ERICH6Q7L0X2 663 aa26.85■■□□□ 1.89
CCDC47-202ENST00000403162 NUDCQ9Y266 331 aa26.84■■□□□ 1.89
CCDC47-202ENST00000403162 IQGAP3Q86VI3 1631 aa26.84■■□□□ 1.89
CCDC47-202ENST00000403162 BCL11AQ9H165 835 aa26.84■■□□□ 1.89
CCDC47-202ENST00000403162 KANK1Q14678 1352 aa26.83■■□□□ 1.89
CCDC47-202ENST00000403162 GGT6Q6P531 493 aa26.83■■□□□ 1.89
CCDC47-202ENST00000403162 MROH1Q8NDA8 1641 aa26.81■■□□□ 1.88
CCDC47-202ENST00000403162 RNF17Q9BXT8 1623 aaKnown RBP26.81■■□□□ 1.88
CCDC47-202ENST00000403162 PRDM15P57071 1507 aaPredicted RBP26.8■■□□□ 1.88
CCDC47-202ENST00000403162 REREQ9P2R6 1566 aa26.8■■□□□ 1.88
CCDC47-202ENST00000403162 ZNF326Q5BKZ1 582 aaKnown RBP26.77■■□□□ 1.88
CCDC47-202ENST00000403162 VWDEQ8N2E2 1590 aa26.76■■□□□ 1.87
CCDC47-202ENST00000403162 PNISRQ8TF01 805 aaKnown RBP26.75■■□□□ 1.87
CCDC47-202ENST00000403162 AGLP35573 1532 aa26.74■■□□□ 1.87
CCDC47-202ENST00000403162 SIGLEC1Q9BZZ2 1709 aa26.72■■□□□ 1.87
CCDC47-202ENST00000403162 KTN1Q86UP2 1357 aaKnown RBP26.72■■□□□ 1.87
CCDC47-202ENST00000403162 POLR3GLQ9BT43 218 aa26.72■■□□□ 1.87
CCDC47-202ENST00000403162 E9PCH4 1651 aa26.72■■□□□ 1.87
CCDC47-202ENST00000403162 WASHC2CQ9Y4E1 1318 aa26.7■■□□□ 1.87
CCDC47-202ENST00000403162 LRPPRCP42704 1394 aaKnown RBP26.69■■□□□ 1.86
CCDC47-202ENST00000403162 CARD11Q9BXL7 1154 aa26.69■■□□□ 1.86
CCDC47-202ENST00000403162 TET3O43151 1660 aa26.69■■□□□ 1.86
CCDC47-202ENST00000403162 CEP152O94986 1710 aa26.68■■□□□ 1.86
CCDC47-202ENST00000403162 BRD4O60885 1362 aaPredicted RBP26.67■■□□□ 1.86
CCDC47-202ENST00000403162 MLECQ14165 292 aa26.67■■□□□ 1.86
CCDC47-202ENST00000403162 TMC1Q8TDI8 760 aa26.67■■□□□ 1.86
CCDC47-202ENST00000403162 LMTK2Q8IWU2 1503 aa26.66■■□□□ 1.86
CCDC47-202ENST00000403162 ABCC3O15438 1527 aa26.65■■□□□ 1.86
CCDC47-202ENST00000403162 CCDC136Q96JN2 1154 aa26.64■■□□□ 1.85
CCDC47-202ENST00000403162 CNGB1Q14028 1251 aaPredicted RBP26.63■■□□□ 1.85
CCDC47-202ENST00000403162 MYBBP1AQ9BQG0 1328 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 1382.1 ms