RNA–Protein interactions for RNA: ENST00000402738.5

HERC3-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-202ENST00000402738 NOC3LQ8WTT2 800 aaKnown RBP12.13□□□□□ -0.47
HERC3-202ENST00000402738 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
HERC3-202ENST00000402738 ABCC8Q09428 1581 aa12.12□□□□□ -0.47
HERC3-202ENST00000402738 SETQ01105 290 aaPredicted RBP12.12□□□□□ -0.47
HERC3-202ENST00000402738 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
HERC3-202ENST00000402738 GNL2Q13823 731 aaKnown RBP12.12□□□□□ -0.47
HERC3-202ENST00000402738 CCAR2Q8N163 923 aaKnown RBP12.12□□□□□ -0.47
HERC3-202ENST00000402738 CGNL1Q0VF96 1302 aa12.12□□□□□ -0.47
HERC3-202ENST00000402738 PHLDB1Q86UU1 1377 aa12.12□□□□□ -0.47
HERC3-202ENST00000402738 FMN1Q68DA7 1419 aa12.11□□□□□ -0.47
HERC3-202ENST00000402738 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
HERC3-202ENST00000402738 POGKQ9P215 609 aa12.11□□□□□ -0.47
HERC3-202ENST00000402738 TEX35Q5T0J7 233 aa12.1□□□□□ -0.47
HERC3-202ENST00000402738 MCTP1Q6DN14 999 aa12.1□□□□□ -0.47
HERC3-202ENST00000402738 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
HERC3-202ENST00000402738 RRP7AQ9Y3A4 280 aaKnown RBP12.1□□□□□ -0.47
HERC3-202ENST00000402738 ANKRD45Q5TZF3 282 aa12.09□□□□□ -0.47
HERC3-202ENST00000402738 BACH2Q9BYV9 841 aa12.09□□□□□ -0.47
HERC3-202ENST00000402738 C22orf23Q9BZE7 217 aa12.09□□□□□ -0.47
HERC3-202ENST00000402738 CCDC39Q9UFE4 941 aa12.09□□□□□ -0.47
HERC3-202ENST00000402738 GOLGA6L19H0YKK7 550 aa12.08□□□□□ -0.48
HERC3-202ENST00000402738 RNF214Q8ND24 703 aa12.08□□□□□ -0.48
HERC3-202ENST00000402738 HAP1P54257 671 aaPredicted RBP12.08□□□□□ -0.48
HERC3-202ENST00000402738 ZMYND15Q9H091 742 aa12.07□□□□□ -0.48
HERC3-202ENST00000402738 ESPNB1AK53 854 aa12.07□□□□□ -0.48
HERC3-202ENST00000402738 GPS2Q13227 327 aa12.07□□□□□ -0.48
HERC3-202ENST00000402738 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
HERC3-202ENST00000402738 DIAPH3Q9NSV4 1193 aa12.07□□□□□ -0.48
HERC3-202ENST00000402738 ST20-MTHFSA0A0A6YYL1 179 aa12.06□□□□□ -0.48
HERC3-202ENST00000402738 BECN2A8MW95 431 aa12.06□□□□□ -0.48
HERC3-202ENST00000402738 A0A0G2JS52 829 aa12.06□□□□□ -0.48
HERC3-202ENST00000402738 SAFB2Q14151 953 aaKnown RBP eCLIP12.06□□□□□ -0.48
HERC3-202ENST00000402738 CCDC66A2RUB6 948 aa12.06□□□□□ -0.48
HERC3-202ENST00000402738 E9PSI1 815 aa12.06□□□□□ -0.48
HERC3-202ENST00000402738 CCDC173Q0VFZ6 552 aa12.06□□□□□ -0.48
HERC3-202ENST00000402738 IFT57Q9NWB7 429 aa12.06□□□□□ -0.48
HERC3-202ENST00000402738 SRPK2P78362 688 aaKnown RBP12.05□□□□□ -0.48
HERC3-202ENST00000402738 APPP05067 770 aa12.05□□□□□ -0.48
HERC3-202ENST00000402738 AKNAQ7Z591 1439 aa12.05□□□□□ -0.48
HERC3-202ENST00000402738 HMMRO75330 724 aa12.05□□□□□ -0.48
HERC3-202ENST00000402738 ZKSCAN2Q63HK3 967 aa12.05□□□□□ -0.48
HERC3-202ENST00000402738 GRPEL1Q9HAV7 217 aa12.05□□□□□ -0.48
HERC3-202ENST00000402738 PANK3Q9H999 370 aa12.04□□□□□ -0.48
HERC3-202ENST00000402738 CHMP3Q9Y3E7 222 aa12.04□□□□□ -0.48
HERC3-202ENST00000402738 ATP6V1DQ9Y5K8 247 aa12.04□□□□□ -0.48
HERC3-202ENST00000402738 CAVIN1Q6NZI2 390 aaKnown RBP12.04□□□□□ -0.48
HERC3-202ENST00000402738 UQCRHLA0A096LP55 91 aa12.04□□□□□ -0.48
HERC3-202ENST00000402738 UQCRHP07919 91 aa12.04□□□□□ -0.48
HERC3-202ENST00000402738 NUCB2P80303 420 aa12.04□□□□□ -0.48
HERC3-202ENST00000402738 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
HERC3-202ENST00000402738 CARMIL1Q5VZK9 1371 aa12.03□□□□□ -0.48
HERC3-202ENST00000402738 TPM3P06753 285 aa12.03□□□□□ -0.48
HERC3-202ENST00000402738 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
HERC3-202ENST00000402738 APAF1O14727 1248 aa12.03□□□□□ -0.48
HERC3-202ENST00000402738 SOX12O15370 315 aa12.02□□□□□ -0.48
HERC3-202ENST00000402738 NPM1P06748 294 aaKnown RBP eCLIP12.02□□□□□ -0.48
HERC3-202ENST00000402738 HOMER1Q86YM7 354 aa12.02□□□□□ -0.49
HERC3-202ENST00000402738 CREBRFQ8IUR6 639 aa12.02□□□□□ -0.49
HERC3-202ENST00000402738 NUP155O75694 1391 aa12.02□□□□□ -0.49
HERC3-202ENST00000402738 PRDM10Q9NQV6 1147 aa12.01□□□□□ -0.49
HERC3-202ENST00000402738 SLC4A10Q6U841 1118 aa12.01□□□□□ -0.49
HERC3-202ENST00000402738 HMGN5P82970 282 aaKnown RBP12.01□□□□□ -0.49
HERC3-202ENST00000402738 NOM1Q5C9Z4 860 aaKnown RBP12.01□□□□□ -0.49
HERC3-202ENST00000402738 RILPL2Q969X0 211 aa12.01□□□□□ -0.49
HERC3-202ENST00000402738 CNTLNQ9NXG0 1405 aa12.01□□□□□ -0.49
HERC3-202ENST00000402738 CCDC7Q96M83 1385 aa12.01□□□□□ -0.49
HERC3-202ENST00000402738 SF3A1Q15459 793 aaKnown RBP12□□□□□ -0.49
HERC3-202ENST00000402738 RTF1Q92541 710 aaKnown RBP12□□□□□ -0.49
HERC3-202ENST00000402738 USP47Q96K76 1375 aa12□□□□□ -0.49
HERC3-202ENST00000402738 CDCA7LQ96GN5 454 aa11.99□□□□□ -0.49
HERC3-202ENST00000402738 PANK1Q8TE04 598 aa11.99□□□□□ -0.49
HERC3-202ENST00000402738 ARGLU1Q9NWB6 273 aaPredicted RBP11.99□□□□□ -0.49
HERC3-202ENST00000402738 KIF7Q2M1P5 1343 aa11.99□□□□□ -0.49
HERC3-202ENST00000402738 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.99□□□□□ -0.49
HERC3-202ENST00000402738 WASHC2AQ641Q2 1341 aa11.99□□□□□ -0.49
HERC3-202ENST00000402738 MPNDQ8N594 471 aa11.99□□□□□ -0.49
HERC3-202ENST00000402738 PATL2C9JE40 543 aaKnown RBP11.98□□□□□ -0.49
HERC3-202ENST00000402738 H3BQV1 296 aa11.98□□□□□ -0.49
HERC3-202ENST00000402738 REC8O95072 547 aa11.98□□□□□ -0.49
HERC3-202ENST00000402738 IFFO2Q5TF58 517 aa11.98□□□□□ -0.49
HERC3-202ENST00000402738 LNPKQ9C0E8 428 aa11.98□□□□□ -0.49
HERC3-202ENST00000402738 MNS1Q8NEH6 495 aa11.98□□□□□ -0.49
HERC3-202ENST00000402738 ELL2O00472 640 aaPredicted RBP11.97□□□□□ -0.49
HERC3-202ENST00000402738 CUX2O14529 1486 aa11.97□□□□□ -0.49
HERC3-202ENST00000402738 MCM4P33991 863 aa11.97□□□□□ -0.49
HERC3-202ENST00000402738 DZIP1LQ8IYY4 767 aaKnown RBP11.97□□□□□ -0.49
HERC3-202ENST00000402738 ISY1Q9ULR0 285 aaKnown RBP11.97□□□□□ -0.49
HERC3-202ENST00000402738 DDX19BQ9UMR2 479 aa11.97□□□□□ -0.49
HERC3-202ENST00000402738 PRPF40AO75400 957 aaKnown RBP11.96□□□□□ -0.49
HERC3-202ENST00000402738 TPD52L1Q16890 204 aaPredicted RBP11.96□□□□□ -0.5
HERC3-202ENST00000402738 STK31Q9BXU1 1019 aa11.96□□□□□ -0.5
HERC3-202ENST00000402738 CCDC34Q96HJ3 373 aa11.95□□□□□ -0.5
HERC3-202ENST00000402738 CWC15Q9P013 229 aaKnown RBP11.95□□□□□ -0.5
HERC3-202ENST00000402738 BICD2Q8TD16 824 aa11.95□□□□□ -0.5
HERC3-202ENST00000402738 GPATCH3Q96I76 525 aa11.95□□□□□ -0.5
HERC3-202ENST00000402738 PDCL3Q9H2J4 239 aa11.95□□□□□ -0.5
HERC3-202ENST00000402738 RAPGEF2Q9Y4G8 1499 aa11.94□□□□□ -0.5
HERC3-202ENST00000402738 NPHP1O15259 732 aa11.94□□□□□ -0.5
HERC3-202ENST00000402738 TSPY26PQ9H489 355 aa11.94□□□□□ -0.5
HERC3-202ENST00000402738 STK26Q9P289 416 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms