RNA–Protein interactions for RNA: ENST00000402583.5

CBX1-203, Transcript of chromobox 1, humanhuman

TSL 4

Gene CBX1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-203ENST00000402583 SYCP2Q9BX26 1530 aa12.95□□□□□ -0.34
CBX1-203ENST00000402583 ARHGEF12Q9NZN5 1544 aa12.95□□□□□ -0.34
CBX1-203ENST00000402583 CNTLNQ9NXG0 1405 aa12.95□□□□□ -0.34
CBX1-203ENST00000402583 NBPF8Q3BBV2 869 aa12.94□□□□□ -0.34
CBX1-203ENST00000402583 PLCH2O75038 1416 aa12.94□□□□□ -0.34
CBX1-203ENST00000402583 PLXNC1O60486 1568 aa12.94□□□□□ -0.34
CBX1-203ENST00000402583 ZCCHC11Q5TAX3 1644 aaKnown RBP12.93□□□□□ -0.34
CBX1-203ENST00000402583 EFCAB2Q5VUJ9 269 aa12.93□□□□□ -0.34
CBX1-203ENST00000402583 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
CBX1-203ENST00000402583 POLA2Q14181 598 aa12.92□□□□□ -0.34
CBX1-203ENST00000402583 UHRF1BP1Q6BDS2 1440 aa12.92□□□□□ -0.34
CBX1-203ENST00000402583 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
CBX1-203ENST00000402583 KCNH8Q96L42 1107 aa12.91□□□□□ -0.34
CBX1-203ENST00000402583 ARAP3Q8WWN8 1544 aa12.91□□□□□ -0.34
CBX1-203ENST00000402583 FAM135AQ9P2D6 1515 aa12.91□□□□□ -0.34
CBX1-203ENST00000402583 ARID4BQ4LE39 1312 aaPredicted RBP12.9□□□□□ -0.34
CBX1-203ENST00000402583 UNC13BO14795 1591 aa12.9□□□□□ -0.34
CBX1-203ENST00000402583 DUOX2Q9NRD8 1548 aa12.9□□□□□ -0.34
CBX1-203ENST00000402583 CACNB1Q02641 598 aaPredicted RBP12.9□□□□□ -0.34
CBX1-203ENST00000402583 ERBINQ96RT1 1412 aa12.89□□□□□ -0.35
CBX1-203ENST00000402583 RALGAPBQ86X10 1494 aa12.88□□□□□ -0.35
CBX1-203ENST00000402583 ABCC1P33527 1531 aa12.87□□□□□ -0.35
CBX1-203ENST00000402583 USP47Q96K76 1375 aa12.86□□□□□ -0.35
CBX1-203ENST00000402583 CCDC144AA2RUR9 1427 aa12.86□□□□□ -0.35
CBX1-203ENST00000402583 KIF7Q2M1P5 1343 aa12.86□□□□□ -0.35
CBX1-203ENST00000402583 POLR1AO95602 1720 aaPredicted RBP12.85□□□□□ -0.35
CBX1-203ENST00000402583 IQGAP3Q86VI3 1631 aa12.85□□□□□ -0.35
CBX1-203ENST00000402583 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
CBX1-203ENST00000402583 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
CBX1-203ENST00000402583 ROCK2O75116 1388 aaKnown RBP12.84□□□□□ -0.35
CBX1-203ENST00000402583 ABCB7O75027 752 aa12.84□□□□□ -0.35
CBX1-203ENST00000402583 MAGI2Q86UL8 1455 aa12.84□□□□□ -0.35
CBX1-203ENST00000402583 WDR7Q9Y4E6 1490 aa12.84□□□□□ -0.35
CBX1-203ENST00000402583 DSG3P32926 999 aa12.83□□□□□ -0.36
CBX1-203ENST00000402583 SUPT16HQ9Y5B9 1047 aaKnown RBP12.83□□□□□ -0.36
CBX1-203ENST00000402583 KDM5CP41229 1560 aa12.82□□□□□ -0.36
CBX1-203ENST00000402583 C11orf95C9JLR9 678 aaPredicted RBP12.82□□□□□ -0.36
CBX1-203ENST00000402583 NEFLP07196 543 aa12.82□□□□□ -0.36
CBX1-203ENST00000402583 SPAG9O60271 1321 aaKnown RBP12.82□□□□□ -0.36
CBX1-203ENST00000402583 ATP10AO60312 1499 aa12.81□□□□□ -0.36
CBX1-203ENST00000402583 DCAF11Q8TEB1 546 aa12.81□□□□□ -0.36
CBX1-203ENST00000402583 CARD11Q9BXL7 1154 aa12.81□□□□□ -0.36
CBX1-203ENST00000402583 PRKRIP1Q9H875 184 aaPredicted RBP12.81□□□□□ -0.36
CBX1-203ENST00000402583 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
CBX1-203ENST00000402583 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
CBX1-203ENST00000402583 ABCA9Q8IUA7 1624 aa12.77□□□□□ -0.36
CBX1-203ENST00000402583 FKBP8Q14318 412 aa12.77□□□□□ -0.37
CBX1-203ENST00000402583 PRAG1Q86YV5 1406 aa12.77□□□□□ -0.37
CBX1-203ENST00000402583 FANCAO15360 1455 aa12.77□□□□□ -0.37
CBX1-203ENST00000402583 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.37
CBX1-203ENST00000402583 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
CBX1-203ENST00000402583 HNRNPUQ00839 825 aaKnown RBP eCLIP12.76□□□□□ -0.37
CBX1-203ENST00000402583 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
CBX1-203ENST00000402583 ZBTB12Q9Y330 459 aaPredicted RBP12.76□□□□□ -0.37
CBX1-203ENST00000402583 KANK1Q14678 1352 aa12.76□□□□□ -0.37
CBX1-203ENST00000402583 ZFYVE16Q7Z3T8 1539 aa12.76□□□□□ -0.37
CBX1-203ENST00000402583 PLA2R1Q13018 1463 aa12.75□□□□□ -0.37
CBX1-203ENST00000402583 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
CBX1-203ENST00000402583 STAC3Q96MF2 364 aa12.75□□□□□ -0.37
CBX1-203ENST00000402583 MRS2Q9HD23 443 aa12.75□□□□□ -0.37
CBX1-203ENST00000402583 KTN1Q86UP2 1357 aaKnown RBP12.74□□□□□ -0.37
CBX1-203ENST00000402583 LAMC1P11047 1609 aa12.73□□□□□ -0.37
CBX1-203ENST00000402583 ATP7AQ04656 1500 aa12.73□□□□□ -0.37
CBX1-203ENST00000402583 ASXL2Q76L83 1435 aa12.73□□□□□ -0.37
CBX1-203ENST00000402583 GPRASP1Q5JY77 1395 aa12.73□□□□□ -0.37
CBX1-203ENST00000402583 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
CBX1-203ENST00000402583 INO80Q9ULG1 1556 aaPredicted RBP12.73□□□□□ -0.37
CBX1-203ENST00000402583 ADGRL1O94910 1474 aa12.72□□□□□ -0.37
CBX1-203ENST00000402583 A2MP01023 1474 aa12.72□□□□□ -0.37
CBX1-203ENST00000402583 BCORL1Q5H9F3 1711 aa12.72□□□□□ -0.37
CBX1-203ENST00000402583 POLR3GLQ9BT43 218 aa12.72□□□□□ -0.37
CBX1-203ENST00000402583 DHX29Q7Z478 1369 aaKnown RBP12.71□□□□□ -0.37
CBX1-203ENST00000402583 ST20-MTHFSA0A0A6YYL1 179 aa12.71□□□□□ -0.37
CBX1-203ENST00000402583 AFAP1Q8N556 730 aa12.71□□□□□ -0.37
CBX1-203ENST00000402583 SCAPERQ9BY12 1400 aa12.71□□□□□ -0.38
CBX1-203ENST00000402583 DEPDC5O75140 1603 aa12.7□□□□□ -0.38
CBX1-203ENST00000402583 CFAP74Q9C0B2 1584 aa12.7□□□□□ -0.38
CBX1-203ENST00000402583 RGL3Q3MIN7 710 aa12.7□□□□□ -0.38
CBX1-203ENST00000402583 TRPM2O94759 1503 aa12.7□□□□□ -0.38
CBX1-203ENST00000402583 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
CBX1-203ENST00000402583 FAM9BQ8IZU0 186 aa12.68□□□□□ -0.38
CBX1-203ENST00000402583 PTPRTO14522 1441 aa12.68□□□□□ -0.38
CBX1-203ENST00000402583 PRDM15P57071 1507 aaPredicted RBP12.67□□□□□ -0.38
CBX1-203ENST00000402583 TET3O43151 1660 aa12.67□□□□□ -0.38
CBX1-203ENST00000402583 ZBED9Q6R2W3 1325 aa12.67□□□□□ -0.38
CBX1-203ENST00000402583 ZNF518AQ6AHZ1 1483 aa12.67□□□□□ -0.38
CBX1-203ENST00000402583 RALBP1Q15311 655 aa12.67□□□□□ -0.38
CBX1-203ENST00000402583 VWDEQ8N2E2 1590 aa12.66□□□□□ -0.38
CBX1-203ENST00000402583 NEURL4Q96JN8 1562 aa12.65□□□□□ -0.38
CBX1-203ENST00000402583 E9PCH4 1651 aa12.65□□□□□ -0.38
CBX1-203ENST00000402583 ERICH6BQ5W0A0 696 aa12.65□□□□□ -0.38
CBX1-203ENST00000402583 KIF3BO15066 747 aa12.64□□□□□ -0.39
CBX1-203ENST00000402583 TMF1P82094 1093 aa12.64□□□□□ -0.39
CBX1-203ENST00000402583 CCDC184Q52MB2 194 aa12.64□□□□□ -0.39
CBX1-203ENST00000402583 COL17A1Q9UMD9 1497 aaPredicted RBP12.64□□□□□ -0.39
CBX1-203ENST00000402583 WASHC2CQ9Y4E1 1318 aa12.63□□□□□ -0.39
CBX1-203ENST00000402583 SPHKAPQ2M3C7 1700 aa12.63□□□□□ -0.39
CBX1-203ENST00000402583 BRD4O60885 1362 aaPredicted RBP12.63□□□□□ -0.39
CBX1-203ENST00000402583 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
CBX1-203ENST00000402583 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms