RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 ZNF687Q8N1G0 1237 aa12.03□□□□□ -0.48
CSNK2A1-204ENST00000400227 MAP3K7O43318 606 aa12.02□□□□□ -0.48
CSNK2A1-204ENST00000400227 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
CSNK2A1-204ENST00000400227 C6orf132Q5T0Z8 1188 aa12□□□□□ -0.49
CSNK2A1-204ENST00000400227 TSR1Q2NL82 804 aaKnown RBP11.99□□□□□ -0.49
CSNK2A1-204ENST00000400227 PTPREP23469 700 aa11.98□□□□□ -0.49
CSNK2A1-204ENST00000400227 POTEEQ6S8J3 1075 aa11.98□□□□□ -0.49
CSNK2A1-204ENST00000400227 PBX2P40425 430 aa11.97□□□□□ -0.49
CSNK2A1-204ENST00000400227 NUTM2FA1L443 756 aa11.96□□□□□ -0.49
CSNK2A1-204ENST00000400227 CDHR5Q9HBB8 845 aa11.96□□□□□ -0.49
CSNK2A1-204ENST00000400227 ARHGAP33O14559 1287 aa11.95□□□□□ -0.5
CSNK2A1-204ENST00000400227 KCNK17Q96T54 332 aa11.95□□□□□ -0.5
CSNK2A1-204ENST00000400227 GPIHBP1Q8IV16 184 aa11.95□□□□□ -0.5
CSNK2A1-204ENST00000400227 KCNH8Q96L42 1107 aa11.95□□□□□ -0.5
CSNK2A1-204ENST00000400227 AXIN2Q9Y2T1 843 aa11.94□□□□□ -0.5
CSNK2A1-204ENST00000400227 PSEN2P49810 448 aa11.93□□□□□ -0.5
CSNK2A1-204ENST00000400227 PPP1R3GB7ZBB8 358 aa11.92□□□□□ -0.5
CSNK2A1-204ENST00000400227 COL9A1P20849 921 aa11.92□□□□□ -0.5
CSNK2A1-204ENST00000400227 PTGDRQ13258 359 aa11.92□□□□□ -0.5
CSNK2A1-204ENST00000400227 CERKQ8TCT0 537 aa11.92□□□□□ -0.5
CSNK2A1-204ENST00000400227 NPDC1Q9NQX5 325 aaPredicted RBP11.92□□□□□ -0.5
CSNK2A1-204ENST00000400227 ZCCHC6Q5VYS8 1495 aaKnown RBP11.91□□□□□ -0.5
CSNK2A1-204ENST00000400227 GPR37O15354 613 aa11.9□□□□□ -0.5
CSNK2A1-204ENST00000400227 FCHSD2O94868 740 aa11.89□□□□□ -0.51
CSNK2A1-204ENST00000400227 DMRTA1Q5VZB9 504 aa11.89□□□□□ -0.51
CSNK2A1-204ENST00000400227 CDAN1Q8IWY9 1227 aa11.89□□□□□ -0.51
CSNK2A1-204ENST00000400227 ZC3H15Q8WU90 426 aaKnown RBP11.87□□□□□ -0.51
CSNK2A1-204ENST00000400227 HIC1Q14526 733 aa11.86□□□□□ -0.51
CSNK2A1-204ENST00000400227 ZBED2Q9BTP6 218 aa11.86□□□□□ -0.51
CSNK2A1-204ENST00000400227 KRTAP3-3Q9BYR6 98 aa11.86□□□□□ -0.51
CSNK2A1-204ENST00000400227 KRTAP3-2Q9BYR7 98 aa11.86□□□□□ -0.51
CSNK2A1-204ENST00000400227 LSM11P83369 360 aaKnown RBP eCLIP11.85□□□□□ -0.511e-6■■■■■ 28.9
CSNK2A1-204ENST00000400227 SLC4A5Q9BY07 1137 aa11.85□□□□□ -0.51
CSNK2A1-204ENST00000400227 PRSS12P56730 875 aa11.84□□□□□ -0.51
CSNK2A1-204ENST00000400227 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
CSNK2A1-204ENST00000400227 GNPATO15228 680 aa11.83□□□□□ -0.52
CSNK2A1-204ENST00000400227 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
CSNK2A1-204ENST00000400227 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
CSNK2A1-204ENST00000400227 TK2O00142 265 aa11.81□□□□□ -0.52
CSNK2A1-204ENST00000400227 ZMYND10O75800 440 aa11.81□□□□□ -0.52
CSNK2A1-204ENST00000400227 PROX2Q3B8N5 592 aa11.81□□□□□ -0.52
CSNK2A1-204ENST00000400227 PADI6Q6TGC4 694 aa11.81□□□□□ -0.52
CSNK2A1-204ENST00000400227 VPS9D1Q9Y2B5 631 aa11.81□□□□□ -0.52
CSNK2A1-204ENST00000400227 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
CSNK2A1-204ENST00000400227 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
CSNK2A1-204ENST00000400227 SHROOM4Q9ULL8 1493 aa11.8□□□□□ -0.52
CSNK2A1-204ENST00000400227 TSKSQ9UJT2 592 aa11.79□□□□□ -0.52
CSNK2A1-204ENST00000400227 FECHP22830 423 aa11.78□□□□□ -0.52
CSNK2A1-204ENST00000400227 ADGRD1Q6QNK2 874 aa11.78□□□□□ -0.52
CSNK2A1-204ENST00000400227 ANKRD13DQ6ZTN6 518 aa11.78□□□□□ -0.52
CSNK2A1-204ENST00000400227 FAM198AQ9UFP1 575 aa11.78□□□□□ -0.52
CSNK2A1-204ENST00000400227 BARGINQ6ZT62 677 aa11.77□□□□□ -0.52
CSNK2A1-204ENST00000400227 TPRNQ4KMQ1 711 aa11.76□□□□□ -0.53
CSNK2A1-204ENST00000400227 RABGEF1Q9UJ41 708 aa11.76□□□□□ -0.53
CSNK2A1-204ENST00000400227 PACS2Q86VP3 889 aa11.75□□□□□ -0.53
CSNK2A1-204ENST00000400227 KIAA1468Q9P260 1216 aa11.75□□□□□ -0.53
CSNK2A1-204ENST00000400227 MAP2K5Q13163 448 aa11.74□□□□□ -0.53
CSNK2A1-204ENST00000400227 HRO43593 1189 aa11.72□□□□□ -0.53
CSNK2A1-204ENST00000400227 MINK1Q8N4C8 1332 aaPredicted RBP11.72□□□□□ -0.53
CSNK2A1-204ENST00000400227 NBPF26B4DH59 902 aa11.71□□□□□ -0.53
CSNK2A1-204ENST00000400227 BHMG1C9JSJ3 638 aaPredicted RBP11.71□□□□□ -0.53
CSNK2A1-204ENST00000400227 ADGRG1Q9Y653 693 aa11.71□□□□□ -0.53
CSNK2A1-204ENST00000400227 KRI1Q8N9T8 703 aaKnown RBP11.7□□□□□ -0.54
CSNK2A1-204ENST00000400227 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
CSNK2A1-204ENST00000400227 IRF6O14896 467 aa11.7□□□□□ -0.54
CSNK2A1-204ENST00000400227 TATDN2Q93075 761 aa11.7□□□□□ -0.54
CSNK2A1-204ENST00000400227 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
CSNK2A1-204ENST00000400227 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
CSNK2A1-204ENST00000400227 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
CSNK2A1-204ENST00000400227 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
CSNK2A1-204ENST00000400227 OATP04181 439 aa11.67□□□□□ -0.54
CSNK2A1-204ENST00000400227 EYA1Q99502 592 aa11.67□□□□□ -0.54
CSNK2A1-204ENST00000400227 RBM46Q8TBY0 533 aaKnown RBP11.66□□□□□ -0.54
CSNK2A1-204ENST00000400227 CCDC102AQ96A19 550 aa11.66□□□□□ -0.54
CSNK2A1-204ENST00000400227 SMAPO00193 183 aa11.65□□□□□ -0.54
CSNK2A1-204ENST00000400227 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
CSNK2A1-204ENST00000400227 LAPTM4BQ86VI4 370 aa11.65□□□□□ -0.54
CSNK2A1-204ENST00000400227 SLC24A3Q9HC58 644 aa11.65□□□□□ -0.54
CSNK2A1-204ENST00000400227 SEPT9Q9UHD8 586 aaPredicted RBP11.65□□□□□ -0.54
CSNK2A1-204ENST00000400227 METTL3Q86U44 580 aaKnown RBP11.64□□□□□ -0.55
CSNK2A1-204ENST00000400227 MRPL50Q8N5N7 158 aaKnown RBP11.64□□□□□ -0.55
CSNK2A1-204ENST00000400227 PXYLP1Q8TE99 480 aa11.64□□□□□ -0.55
CSNK2A1-204ENST00000400227 STAC3Q96MF2 364 aa11.64□□□□□ -0.55
CSNK2A1-204ENST00000400227 FAM98CQ17RN3 349 aaKnown RBP11.63□□□□□ -0.55
CSNK2A1-204ENST00000400227 AK7Q96M32 723 aa11.63□□□□□ -0.55
CSNK2A1-204ENST00000400227 DCAF1Q9Y4B6 1507 aa11.62□□□□□ -0.55
CSNK2A1-204ENST00000400227 MMRN1Q13201 1228 aa11.6□□□□□ -0.55
CSNK2A1-204ENST00000400227 PHOX2BQ99453 314 aa11.6□□□□□ -0.55
CSNK2A1-204ENST00000400227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
CSNK2A1-204ENST00000400227 RCCD1A6NED2 376 aa11.58□□□□□ -0.56
CSNK2A1-204ENST00000400227 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
CSNK2A1-204ENST00000400227 ZFRQ96KR1 1074 aaKnown RBP11.58□□□□□ -0.56
CSNK2A1-204ENST00000400227 DNAJB2P25686 324 aa11.57□□□□□ -0.56
CSNK2A1-204ENST00000400227 GOLGA8CPA6NN73 597 aa11.57□□□□□ -0.56
CSNK2A1-204ENST00000400227 TRIM66O15016 1216 aa11.57□□□□□ -0.56
CSNK2A1-204ENST00000400227 TMEM134Q9H6X4 195 aa11.55□□□□□ -0.56
CSNK2A1-204ENST00000400227 AMHR2Q16671 573 aa11.54□□□□□ -0.56
CSNK2A1-204ENST00000400227 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
CSNK2A1-204ENST00000400227 SUPT5HO00267 1087 aaKnown RBP11.53□□□□□ -0.56
CSNK2A1-204ENST00000400227 NLRP7Q8WX94 980 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms