RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 IQGAP3Q86VI3 1631 aa19.09■□□□□ 0.65
PRAME-202ENST00000398743 KDM2AQ9Y2K7 1162 aa19.09■□□□□ 0.65
PRAME-202ENST00000398743 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.08■□□□□ 0.645e-17■■□□□ 11.4
PRAME-202ENST00000398743 CCDC184Q52MB2 194 aa19.07■□□□□ 0.64
PRAME-202ENST00000398743 MAGI2Q86UL8 1455 aa19.07■□□□□ 0.64
PRAME-202ENST00000398743 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
PRAME-202ENST00000398743 ARAP3Q8WWN8 1544 aa19.05■□□□□ 0.64
PRAME-202ENST00000398743 PLA2R1Q13018 1463 aa19.05■□□□□ 0.64
PRAME-202ENST00000398743 ROCK2O75116 1388 aaKnown RBP19.05■□□□□ 0.64
PRAME-202ENST00000398743 DHX29Q7Z478 1369 aaKnown RBP19.04■□□□□ 0.64
PRAME-202ENST00000398743 POLR3GLQ9BT43 218 aa19.03■□□□□ 0.64
PRAME-202ENST00000398743 TRAPPC8Q9Y2L5 1435 aa19.03■□□□□ 0.64
PRAME-202ENST00000398743 PRAG1Q86YV5 1406 aa19.02■□□□□ 0.64
PRAME-202ENST00000398743 ATP10AO60312 1499 aa19.01■□□□□ 0.63
PRAME-202ENST00000398743 BCANQ96GW7 911 aa19.01■□□□□ 0.63
PRAME-202ENST00000398743 WDR7Q9Y4E6 1490 aa19.01■□□□□ 0.63
PRAME-202ENST00000398743 FAM9BQ8IZU0 186 aa19■□□□□ 0.63
PRAME-202ENST00000398743 ST20-MTHFSA0A0A6YYL1 179 aa19■□□□□ 0.63
PRAME-202ENST00000398743 RTEL1-TNFRSF6BF6WH68 1400 aa19■□□□□ 0.63
PRAME-202ENST00000398743 TRPM1Q7Z4N2 1603 aa18.99■□□□□ 0.63
PRAME-202ENST00000398743 SPAG9O60271 1321 aaKnown RBP18.99■□□□□ 0.63
PRAME-202ENST00000398743 A2MP01023 1474 aa18.98■□□□□ 0.63
PRAME-202ENST00000398743 RGL3Q3MIN7 710 aa18.98■□□□□ 0.63
PRAME-202ENST00000398743 ZFYVE16Q7Z3T8 1539 aa18.97■□□□□ 0.63
PRAME-202ENST00000398743 GPRASP1Q5JY77 1395 aa18.94■□□□□ 0.62
PRAME-202ENST00000398743 ZBED9Q6R2W3 1325 aa18.94■□□□□ 0.62
PRAME-202ENST00000398743 AFAP1Q8N556 730 aa18.94■□□□□ 0.62
PRAME-202ENST00000398743 ABCA9Q8IUA7 1624 aa18.93■□□□□ 0.62
PRAME-202ENST00000398743 FANCAO15360 1455 aa18.93■□□□□ 0.62
PRAME-202ENST00000398743 EIF2AK4Q9P2K8 1649 aaKnown RBP18.93■□□□□ 0.62
PRAME-202ENST00000398743 LAMC1P11047 1609 aa18.92■□□□□ 0.62
PRAME-202ENST00000398743 PRDM15P57071 1507 aaPredicted RBP18.89■□□□□ 0.62
PRAME-202ENST00000398743 CNGB1Q14028 1251 aaPredicted RBP18.89■□□□□ 0.62
PRAME-202ENST00000398743 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.62
PRAME-202ENST00000398743 ATP7AQ04656 1500 aa18.89■□□□□ 0.61
PRAME-202ENST00000398743 INO80Q9ULG1 1556 aaPredicted RBP18.89■□□□□ 0.61
PRAME-202ENST00000398743 E9PCH4 1651 aa18.88■□□□□ 0.61
PRAME-202ENST00000398743 DEPDC5O75140 1603 aa18.88■□□□□ 0.61
PRAME-202ENST00000398743 KTN1Q86UP2 1357 aaKnown RBP18.87■□□□□ 0.61
PRAME-202ENST00000398743 ASXL2Q76L83 1435 aa18.87■□□□□ 0.61
PRAME-202ENST00000398743 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
PRAME-202ENST00000398743 TRPM2O94759 1503 aa18.86■□□□□ 0.61
PRAME-202ENST00000398743 TSHZ2Q9NRE2 1034 aa18.86■□□□□ 0.61
PRAME-202ENST00000398743 SCAPERQ9BY12 1400 aa18.85■□□□□ 0.61
PRAME-202ENST00000398743 KANK1Q14678 1352 aa18.83■□□□□ 0.61
PRAME-202ENST00000398743 COL17A1Q9UMD9 1497 aaPredicted RBP18.83■□□□□ 0.61
PRAME-202ENST00000398743 PTPRTO14522 1441 aa18.83■□□□□ 0.6
PRAME-202ENST00000398743 RALBP1Q15311 655 aa18.83■□□□□ 0.6
PRAME-202ENST00000398743 TET3O43151 1660 aa18.82■□□□□ 0.6
PRAME-202ENST00000398743 RNF17Q9BXT8 1623 aaKnown RBP18.82■□□□□ 0.6
PRAME-202ENST00000398743 TMC1Q8TDI8 760 aa18.82■□□□□ 0.6
PRAME-202ENST00000398743 SPHKAPQ2M3C7 1700 aa18.81■□□□□ 0.6
PRAME-202ENST00000398743 MYBBP1AQ9BQG0 1328 aaKnown RBP18.81■□□□□ 0.6
PRAME-202ENST00000398743 VWDEQ8N2E2 1590 aa18.81■□□□□ 0.6
PRAME-202ENST00000398743 TESK2Q96S53 571 aa18.81■□□□□ 0.6
PRAME-202ENST00000398743 MYT1LQ9UL68 1186 aa18.81■□□□□ 0.6
PRAME-202ENST00000398743 PNISRQ8TF01 805 aaKnown RBP18.8■□□□□ 0.6
PRAME-202ENST00000398743 BRD4O60885 1362 aaPredicted RBP18.8■□□□□ 0.6
PRAME-202ENST00000398743 ERICH6BQ5W0A0 696 aa18.79■□□□□ 0.6
PRAME-202ENST00000398743 CEP152O94986 1710 aa18.79■□□□□ 0.6
PRAME-202ENST00000398743 MADDQ8WXG6 1647 aa18.78■□□□□ 0.6
PRAME-202ENST00000398743 KIF3BO15066 747 aa18.78■□□□□ 0.6
PRAME-202ENST00000398743 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
PRAME-202ENST00000398743 STAC3Q96MF2 364 aa18.78■□□□□ 0.6
PRAME-202ENST00000398743 NPM1P06748 294 aaKnown RBP eCLIP18.78■□□□□ 0.6
PRAME-202ENST00000398743 IRX6P78412 446 aaPredicted RBP18.78■□□□□ 0.6
PRAME-202ENST00000398743 CLTCL1P53675 1640 aa18.78■□□□□ 0.6
PRAME-202ENST00000398743 DISP3Q9P2K9 1392 aa18.78■□□□□ 0.6
PRAME-202ENST00000398743 TMF1P82094 1093 aa18.76■□□□□ 0.59
PRAME-202ENST00000398743 ZNF518AQ6AHZ1 1483 aa18.75■□□□□ 0.59
PRAME-202ENST00000398743 PARD3Q8TEW0 1356 aa18.75■□□□□ 0.59
PRAME-202ENST00000398743 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
PRAME-202ENST00000398743 MROH1Q8NDA8 1641 aa18.74■□□□□ 0.59
PRAME-202ENST00000398743 LRPPRCP42704 1394 aaKnown RBP18.74■□□□□ 0.59
PRAME-202ENST00000398743 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
PRAME-202ENST00000398743 WASHC2CQ9Y4E1 1318 aa18.73■□□□□ 0.59
PRAME-202ENST00000398743 NEURL4Q96JN8 1562 aa18.73■□□□□ 0.59
PRAME-202ENST00000398743 NLRP13Q86W25 1043 aa18.72■□□□□ 0.59
PRAME-202ENST00000398743 KIDINS220Q9ULH0 1771 aa18.72■□□□□ 0.59
PRAME-202ENST00000398743 CFAP74Q9C0B2 1584 aa18.71■□□□□ 0.59
PRAME-202ENST00000398743 IQGAP1P46940 1657 aa18.71■□□□□ 0.58
PRAME-202ENST00000398743 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
PRAME-202ENST00000398743 EFCAB6Q5THR3 1501 aa18.7■□□□□ 0.58
PRAME-202ENST00000398743 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
PRAME-202ENST00000398743 SCAF11Q99590 1463 aaKnown RBP18.69■□□□□ 0.58
PRAME-202ENST00000398743 MYT1Q01538 1121 aa18.68■□□□□ 0.58
PRAME-202ENST00000398743 PANK3Q9H999 370 aa18.68■□□□□ 0.58
PRAME-202ENST00000398743 PPP4R2Q9NY27 417 aa18.68■□□□□ 0.58
PRAME-202ENST00000398743 LMTK2Q8IWU2 1503 aa18.67■□□□□ 0.58
PRAME-202ENST00000398743 POGZQ7Z3K3 1410 aa18.67■□□□□ 0.58
PRAME-202ENST00000398743 EIF3AQ14152 1382 aaKnown RBP18.64■□□□□ 0.58
PRAME-202ENST00000398743 MYOM2P54296 1465 aa18.64■□□□□ 0.57
PRAME-202ENST00000398743 UGGT1Q9NYU2 1555 aa18.64■□□□□ 0.57
PRAME-202ENST00000398743 KIAA1210Q9ULL0 1709 aa18.64■□□□□ 0.57
PRAME-202ENST00000398743 PPRC1Q5VV67 1664 aaKnown RBP18.64■□□□□ 0.57
PRAME-202ENST00000398743 MLH3Q9UHC1 1453 aa18.64■□□□□ 0.57
PRAME-202ENST00000398743 CDCA8Q53HL2 280 aa18.64■□□□□ 0.57
PRAME-202ENST00000398743 CC2D1BQ5T0F9 858 aaKnown RBP18.64■□□□□ 0.57
PRAME-202ENST00000398743 MAP3K4Q9Y6R4 1608 aa18.62■□□□□ 0.57
PRAME-202ENST00000398743 HECW2Q9P2P5 1572 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms