RNA–Protein interactions for RNA: ENST00000398080.5

SCML1-204, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCML1, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-204ENST00000398080 MRC2Q9UBG0 1479 aa16.5■□□□□ 0.23
SCML1-204ENST00000398080 PLEKHD1A6NEE1 506 aa16.5■□□□□ 0.23
SCML1-204ENST00000398080 TSPY4P0CV99 314 aa16.5■□□□□ 0.23
SCML1-204ENST00000398080 TSPY10P0CW01 314 aa16.5■□□□□ 0.23
SCML1-204ENST00000398080 CRBNQ96SW2 442 aa16.5■□□□□ 0.23
SCML1-204ENST00000398080 DISP3Q9P2K9 1392 aa16.49■□□□□ 0.23
SCML1-204ENST00000398080 PANK3Q9H999 370 aa16.49■□□□□ 0.23
SCML1-204ENST00000398080 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
SCML1-204ENST00000398080 PER1O15534 1290 aaPredicted RBP16.48■□□□□ 0.23
SCML1-204ENST00000398080 CEP170Q5SW79 1584 aa16.47■□□□□ 0.23
SCML1-204ENST00000398080 ADGBQ8N7X0 1667 aa16.45■□□□□ 0.22
SCML1-204ENST00000398080 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
SCML1-204ENST00000398080 BRD4O60885 1362 aaPredicted RBP16.44■□□□□ 0.22
SCML1-204ENST00000398080 CDC42BPAQ5VT25 1732 aa16.44■□□□□ 0.22
SCML1-204ENST00000398080 NLRP13Q86W25 1043 aa16.44■□□□□ 0.22
SCML1-204ENST00000398080 RALBP1Q15311 655 aa16.43■□□□□ 0.22
SCML1-204ENST00000398080 UHRF1BP1Q6BDS2 1440 aa16.43■□□□□ 0.22
SCML1-204ENST00000398080 ADGRL2O95490 1459 aa16.43■□□□□ 0.22
SCML1-204ENST00000398080 RTL5Q5HYW3 569 aaPredicted RBP16.43■□□□□ 0.22
SCML1-204ENST00000398080 ADAMTS8Q9UP79 889 aa16.43■□□□□ 0.22
SCML1-204ENST00000398080 NEFMP07197 916 aa16.42■□□□□ 0.22
SCML1-204ENST00000398080 BACH2Q9BYV9 841 aa16.42■□□□□ 0.22
SCML1-204ENST00000398080 CROCC2H7BZ55 1655 aa16.42■□□□□ 0.22
SCML1-204ENST00000398080 ATP10BO94823 1461 aa16.42■□□□□ 0.22
SCML1-204ENST00000398080 TESK2Q96S53 571 aa16.42■□□□□ 0.22
SCML1-204ENST00000398080 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
SCML1-204ENST00000398080 IFT140Q96RY7 1462 aa16.4■□□□□ 0.22
SCML1-204ENST00000398080 CCDC146Q8IYE0 955 aa16.4■□□□□ 0.22
SCML1-204ENST00000398080 PARD3Q8TEW0 1356 aa16.4■□□□□ 0.22
SCML1-204ENST00000398080 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.22
SCML1-204ENST00000398080 ITSN2Q9NZM3 1697 aa16.38■□□□□ 0.21
SCML1-204ENST00000398080 PLA2R1Q13018 1463 aa16.38■□□□□ 0.21
SCML1-204ENST00000398080 MAGI1Q96QZ7 1491 aaPredicted RBP16.38■□□□□ 0.21
SCML1-204ENST00000398080 ARID4BQ4LE39 1312 aaPredicted RBP16.38■□□□□ 0.21
SCML1-204ENST00000398080 ABCC10Q5T3U5 1492 aa16.37■□□□□ 0.21
SCML1-204ENST00000398080 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
SCML1-204ENST00000398080 SPINK5Q9NQ38 1064 aaPredicted RBP16.36■□□□□ 0.21
SCML1-204ENST00000398080 CCDC144AA2RUR9 1427 aa16.36■□□□□ 0.21
SCML1-204ENST00000398080 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
SCML1-204ENST00000398080 RGS3P49796 1198 aa16.35■□□□□ 0.21
SCML1-204ENST00000398080 FAM135AQ9P2D6 1515 aa16.34■□□□□ 0.21
SCML1-204ENST00000398080 PLEKHH1Q9ULM0 1364 aa16.34■□□□□ 0.21
SCML1-204ENST00000398080 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
SCML1-204ENST00000398080 E9PCH4 1651 aa16.34■□□□□ 0.21
SCML1-204ENST00000398080 A2MP01023 1474 aa16.34■□□□□ 0.21
SCML1-204ENST00000398080 DMRT2Q9Y5R5 561 aa16.32■□□□□ 0.2
SCML1-204ENST00000398080 PLEKHH2Q8IVE3 1493 aa16.31■□□□□ 0.2
SCML1-204ENST00000398080 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
SCML1-204ENST00000398080 SENP3Q9H4L4 574 aaPredicted RBP16.31■□□□□ 0.2
SCML1-204ENST00000398080 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
SCML1-204ENST00000398080 TRPM1Q7Z4N2 1603 aa16.3■□□□□ 0.2
SCML1-204ENST00000398080 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
SCML1-204ENST00000398080 ADCY10Q96PN6 1610 aa16.29■□□□□ 0.2
SCML1-204ENST00000398080 ABCA8O94911 1581 aa16.29■□□□□ 0.2
SCML1-204ENST00000398080 BCAR3O75815 825 aa16.29■□□□□ 0.2
SCML1-204ENST00000398080 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.29■□□□□ 0.2
SCML1-204ENST00000398080 SAMD9LQ8IVG5 1584 aa16.29■□□□□ 0.2
SCML1-204ENST00000398080 PTPRGP23470 1445 aa16.29■□□□□ 0.2
SCML1-204ENST00000398080 SYNJ2O15056 1496 aa16.28■□□□□ 0.2
SCML1-204ENST00000398080 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
SCML1-204ENST00000398080 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
SCML1-204ENST00000398080 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
SCML1-204ENST00000398080 SYCP2Q9BX26 1530 aa16.27■□□□□ 0.2
SCML1-204ENST00000398080 PPP2R1AP30153 589 aa16.27■□□□□ 0.2
SCML1-204ENST00000398080 DUSP27Q5VZP5 1158 aa16.27■□□□□ 0.19
SCML1-204ENST00000398080 MYT1LQ9UL68 1186 aa16.26■□□□□ 0.19
SCML1-204ENST00000398080 COL17A1Q9UMD9 1497 aaPredicted RBP16.26■□□□□ 0.19
SCML1-204ENST00000398080 CDC42BPBQ9Y5S2 1711 aa16.25■□□□□ 0.19
SCML1-204ENST00000398080 TMF1P82094 1093 aa16.25■□□□□ 0.19
SCML1-204ENST00000398080 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
SCML1-204ENST00000398080 PDE3BQ13370 1112 aa16.24■□□□□ 0.19
SCML1-204ENST00000398080 APAF1O14727 1248 aa16.24■□□□□ 0.19
SCML1-204ENST00000398080 NEUROD2Q15784 382 aa16.23■□□□□ 0.19
SCML1-204ENST00000398080 BLMP54132 1417 aaPredicted RBP16.23■□□□□ 0.19
SCML1-204ENST00000398080 WDR43Q15061 677 aaKnown RBP eCLIP16.23■□□□□ 0.19
SCML1-204ENST00000398080 CCDC141Q6ZP82 1450 aa16.23■□□□□ 0.19
SCML1-204ENST00000398080 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
SCML1-204ENST00000398080 KDM2BQ8NHM5 1336 aa16.22■□□□□ 0.19
SCML1-204ENST00000398080 SHANK2Q9UPX8 1470 aa16.22■□□□□ 0.19
SCML1-204ENST00000398080 C8orf34Q49A92 452 aa16.22■□□□□ 0.19
SCML1-204ENST00000398080 NFKBIBQ15653 356 aa16.21■□□□□ 0.19
SCML1-204ENST00000398080 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
SCML1-204ENST00000398080 NUP160Q12769 1436 aa16.21■□□□□ 0.19
SCML1-204ENST00000398080 TNNQ9UQP3 1299 aa16.21■□□□□ 0.19
SCML1-204ENST00000398080 ARHGAP5Q13017 1502 aa16.2■□□□□ 0.18
SCML1-204ENST00000398080 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
SCML1-204ENST00000398080 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
SCML1-204ENST00000398080 MYO5CQ9NQX4 1742 aa16.2■□□□□ 0.18
SCML1-204ENST00000398080 IGHDP01880 384 aa16.19■□□□□ 0.18
SCML1-204ENST00000398080 MS4A1P11836 297 aa16.19■□□□□ 0.18
SCML1-204ENST00000398080 TTC37Q6PGP7 1564 aa16.19■□□□□ 0.18
SCML1-204ENST00000398080 SEC24BO95487 1268 aa16.19■□□□□ 0.18
SCML1-204ENST00000398080 FRAT2O75474 233 aaPredicted RBP16.18■□□□□ 0.18
SCML1-204ENST00000398080 WDR7Q9Y4E6 1490 aa16.18■□□□□ 0.18
SCML1-204ENST00000398080 FRAT1Q92837 279 aaPredicted RBP16.18■□□□□ 0.18
SCML1-204ENST00000398080 GPRASP1Q5JY77 1395 aa16.17■□□□□ 0.18
SCML1-204ENST00000398080 GOLGA2Q08379 1002 aa16.17■□□□□ 0.18
SCML1-204ENST00000398080 PRDM15P57071 1507 aaPredicted RBP16.17■□□□□ 0.18
SCML1-204ENST00000398080 PANK1Q8TE04 598 aa16.17■□□□□ 0.18
SCML1-204ENST00000398080 BCL2L13Q9BXK5 485 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms