RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
PUM3-202ENST00000397885 MTUS2Q5JR59 1369 aa15.31■□□□□ 0.04
PUM3-202ENST00000397885 ZMYND15Q9H091 742 aa15.29■□□□□ 0.04
PUM3-202ENST00000397885 NUDCQ9Y266 331 aa15.29■□□□□ 0.04
PUM3-202ENST00000397885 POGZQ7Z3K3 1410 aa15.29■□□□□ 0.04
PUM3-202ENST00000397885 CDC42BPBQ9Y5S2 1711 aa15.29■□□□□ 0.04
PUM3-202ENST00000397885 PTPN23Q9H3S7 1636 aa15.29■□□□□ 0.04
PUM3-202ENST00000397885 ZFYVE16Q7Z3T8 1539 aa15.29■□□□□ 0.04
PUM3-202ENST00000397885 BACH2Q9BYV9 841 aa15.28■□□□□ 0.04
PUM3-202ENST00000397885 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
PUM3-202ENST00000397885 PRKRIP1Q9H875 184 aaPredicted RBP15.28■□□□□ 0.04
PUM3-202ENST00000397885 ADAMTSL3P82987 1691 aa15.28■□□□□ 0.04
PUM3-202ENST00000397885 PDE4AP27815 886 aa15.27■□□□□ 0.04
PUM3-202ENST00000397885 FRAT1Q92837 279 aaPredicted RBP15.27■□□□□ 0.04
PUM3-202ENST00000397885 ARID4BQ4LE39 1312 aaPredicted RBP15.27■□□□□ 0.04
PUM3-202ENST00000397885 BCORL1Q5H9F3 1711 aa15.27■□□□□ 0.03
PUM3-202ENST00000397885 NFKBIBQ15653 356 aa15.26■□□□□ 0.03
PUM3-202ENST00000397885 SUPT6HQ7KZ85 1726 aaKnown RBP15.26■□□□□ 0.03
PUM3-202ENST00000397885 MRS2Q9HD23 443 aa15.26■□□□□ 0.03
PUM3-202ENST00000397885 DAXXQ9UER7 740 aaPredicted RBP15.25■□□□□ 0.03
PUM3-202ENST00000397885 MYOM3Q5VTT5 1437 aa15.25■□□□□ 0.03
PUM3-202ENST00000397885 EHBP1L1Q8N3D4 1523 aa15.25■□□□□ 0.03
PUM3-202ENST00000397885 CDC42BPAQ5VT25 1732 aa15.25■□□□□ 0.03
PUM3-202ENST00000397885 FAM9BQ8IZU0 186 aa15.25■□□□□ 0.03
PUM3-202ENST00000397885 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
PUM3-202ENST00000397885 CCDC184Q52MB2 194 aa15.24■□□□□ 0.03
PUM3-202ENST00000397885 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
PUM3-202ENST00000397885 YEATS2Q9ULM3 1422 aa15.23■□□□□ 0.03
PUM3-202ENST00000397885 PODXL2Q9NZ53 605 aa15.23■□□□□ 0.03
PUM3-202ENST00000397885 RRP9O43818 475 aaKnown RBP15.22■□□□□ 0.03
PUM3-202ENST00000397885 VSIG10Q8N0Z9 540 aa15.22■□□□□ 0.03
PUM3-202ENST00000397885 KDM5CP41229 1560 aa15.22■□□□□ 0.03
PUM3-202ENST00000397885 ATP10AO60312 1499 aa15.22■□□□□ 0.03
PUM3-202ENST00000397885 NAIPQ13075 1403 aa15.22■□□□□ 0.03
PUM3-202ENST00000397885 SLC24A1O60721 1099 aa15.21■□□□□ 0.03
PUM3-202ENST00000397885 ITSN2Q9NZM3 1697 aa15.21■□□□□ 0.02
PUM3-202ENST00000397885 ABCC1P33527 1531 aa15.2■□□□□ 0.02
PUM3-202ENST00000397885 PTPRMP28827 1452 aa15.2■□□□□ 0.02
PUM3-202ENST00000397885 MADDQ8WXG6 1647 aa15.19■□□□□ 0.02
PUM3-202ENST00000397885 PTPRKQ15262 1439 aa15.19■□□□□ 0.02
PUM3-202ENST00000397885 C9orf84Q5VXU9 1444 aa15.19■□□□□ 0.02
PUM3-202ENST00000397885 AFAP1Q8N556 730 aa15.19■□□□□ 0.02
PUM3-202ENST00000397885 GPATCH8Q9UKJ3 1502 aaKnown RBP15.19■□□□□ 0.02
PUM3-202ENST00000397885 HECW2Q9P2P5 1572 aa15.19■□□□□ 0.02
PUM3-202ENST00000397885 NCOA1Q15788 1441 aa15.18■□□□□ 0.02
PUM3-202ENST00000397885 HSPA5P11021 654 aaKnown RBP15.17■□□□□ 0.02
PUM3-202ENST00000397885 MLH3Q9UHC1 1453 aa15.17■□□□□ 0.02
PUM3-202ENST00000397885 GCC2Q8IWJ2 1684 aa15.17■□□□□ 0.02
PUM3-202ENST00000397885 EIF4G2P78344 907 aaKnown RBP eCLIP15.17■□□□□ 0.02
PUM3-202ENST00000397885 SIGLEC1Q9BZZ2 1709 aa15.17■□□□□ 0.02
PUM3-202ENST00000397885 ARHGEF12Q9NZN5 1544 aa15.17■□□□□ 0.02
PUM3-202ENST00000397885 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
PUM3-202ENST00000397885 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
PUM3-202ENST00000397885 TRAPPC8Q9Y2L5 1435 aa15.16■□□□□ 0.02
PUM3-202ENST00000397885 PLEKHH2Q8IVE3 1493 aa15.15■□□□□ 0.02
PUM3-202ENST00000397885 CFDP1Q9UEE9 299 aaPredicted RBP15.15■□□□□ 0.02
PUM3-202ENST00000397885 SAMD9LQ8IVG5 1584 aa15.15■□□□□ 0.02
PUM3-202ENST00000397885 CCDC7Q96M83 1385 aa15.15■□□□□ 0.02
PUM3-202ENST00000397885 HSP90AA2PQ14568 343 aaPredicted RBP15.15■□□□□ 0.02
PUM3-202ENST00000397885 REREQ9P2R6 1566 aa15.14■□□□□ 0.01
PUM3-202ENST00000397885 DIP2CQ9Y2E4 1556 aa15.14■□□□□ 0.01
PUM3-202ENST00000397885 KIAA1107Q9UPP5 1409 aa15.13■□□□□ 0.01
PUM3-202ENST00000397885 TCOF1Q13428 1488 aaKnown RBP15.13■□□□□ 0.01
PUM3-202ENST00000397885 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
PUM3-202ENST00000397885 FER1L4A9Z1Z3 1794 aa15.12■□□□□ 0.01
PUM3-202ENST00000397885 ABCA6Q8N139 1617 aa15.12■□□□□ 0.01
PUM3-202ENST00000397885 MLECQ14165 292 aa15.12■□□□□ 0.01
PUM3-202ENST00000397885 SYCP2Q9BX26 1530 aa15.11■□□□□ 0.01
PUM3-202ENST00000397885 KIDINS220Q9ULH0 1771 aa15.11■□□□□ 0.01
PUM3-202ENST00000397885 HSP90AA1P07900 732 aaKnown RBP15.1■□□□□ 0.01
PUM3-202ENST00000397885 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
PUM3-202ENST00000397885 L1TD1Q5T7N2 865 aaKnown RBP15.1■□□□□ 0.01
PUM3-202ENST00000397885 POLR1AO95602 1720 aaPredicted RBP15.09■□□□□ 0.01
PUM3-202ENST00000397885 AGLP35573 1532 aa15.09■□□□□ 0.01
PUM3-202ENST00000397885 SPAG9O60271 1321 aaKnown RBP15.08■□□□□ 0
PUM3-202ENST00000397885 RRP1P56182 461 aaKnown RBP15.08■□□□□ 0
PUM3-202ENST00000397885 RRAGDQ9NQL2 400 aaPredicted RBP15.08■□□□□ 0
PUM3-202ENST00000397885 MIA2Q96PC5 1412 aa15.06■□□□□ 0
PUM3-202ENST00000397885 PLEKHG5O94827 1062 aa15.05■□□□□ 0
PUM3-202ENST00000397885 CLCN1P35523 988 aa15.05■□□□□ -0
PUM3-202ENST00000397885 ATP7AQ04656 1500 aa15.05■□□□□ -0
PUM3-202ENST00000397885 INO80Q9ULG1 1556 aaPredicted RBP15.04■□□□□ -0
PUM3-202ENST00000397885 RRP7BPQ9NSQ0 103 aa15.03■□□□□ -0
PUM3-202ENST00000397885 ZNF644Q9H582 1327 aaPredicted RBP15.03■□□□□ -0
PUM3-202ENST00000397885 RSPH4AQ5TD94 716 aa15.03■□□□□ -0
PUM3-202ENST00000397885 PNNQ9H307 717 aaKnown RBP15.03■□□□□ -0
PUM3-202ENST00000397885 CENPJQ9HC77 1338 aaPredicted RBP15.02■□□□□ -0
PUM3-202ENST00000397885 MBD5Q9P267 1494 aa15.02■□□□□ -0
PUM3-202ENST00000397885 FRAT2O75474 233 aaPredicted RBP15.02■□□□□ -0
PUM3-202ENST00000397885 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
PUM3-202ENST00000397885 EXOC6Q8TAG9 804 aa15.02■□□□□ -0
PUM3-202ENST00000397885 ESF1Q9H501 851 aaKnown RBP15.02■□□□□ -0
PUM3-202ENST00000397885 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
PUM3-202ENST00000397885 RTEL1-TNFRSF6BF6WH68 1400 aa15.01□□□□□ -0.01
PUM3-202ENST00000397885 ADGBQ8N7X0 1667 aa15.01□□□□□ -0.01
PUM3-202ENST00000397885 NAP1L5Q96NT1 182 aaPredicted RBP15□□□□□ -0.01
PUM3-202ENST00000397885 CHIC2Q9UKJ5 165 aa15□□□□□ -0.01
PUM3-202ENST00000397885 CAMSAP2Q08AD1 1489 aa15□□□□□ -0.01
PUM3-202ENST00000397885 A2MP01023 1474 aa14.99□□□□□ -0.01
PUM3-202ENST00000397885 MPHOSPH9Q99550 1183 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms