RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 MYOM3Q5VTT5 1437 aa22.56■■□□□ 1.2
SNRNP25-203ENST00000397876 MAST1Q9Y2H9 1570 aa22.55■■□□□ 1.2
SNRNP25-203ENST00000397876 KANK4Q5T7N3 995 aaPredicted RBP22.55■■□□□ 1.2
SNRNP25-203ENST00000397876 MIA2Q96PC5 1412 aa22.55■■□□□ 1.2
SNRNP25-203ENST00000397876 A2ML1A8K2U0 1454 aa22.54■■□□□ 1.2
SNRNP25-203ENST00000397876 LTBP4Q8N2S1 1624 aa22.53■■□□□ 1.2
SNRNP25-203ENST00000397876 PZPP20742 1482 aa22.53■■□□□ 1.2
SNRNP25-203ENST00000397876 NCKAP5LQ9HCH0 1330 aa22.52■■□□□ 1.2
SNRNP25-203ENST00000397876 WASHC2CQ9Y4E1 1318 aa22.52■■□□□ 1.2
SNRNP25-203ENST00000397876 PKD2Q13563 968 aa22.51■■□□□ 1.19
SNRNP25-203ENST00000397876 TCOF1Q13428 1488 aaKnown RBP22.51■■□□□ 1.19
SNRNP25-203ENST00000397876 TNRQ92752 1358 aa22.5■■□□□ 1.19
SNRNP25-203ENST00000397876 IQSEC2Q5JU85 1478 aa22.49■■□□□ 1.19
SNRNP25-203ENST00000397876 DNMT1P26358 1616 aaKnown RBP22.49■■□□□ 1.19
SNRNP25-203ENST00000397876 RNF17Q9BXT8 1623 aaKnown RBP22.49■■□□□ 1.19
SNRNP25-203ENST00000397876 EIF2AK4Q9P2K8 1649 aaKnown RBP22.48■■□□□ 1.19
SNRNP25-203ENST00000397876 APLP2Q06481 763 aa22.47■■□□□ 1.19
SNRNP25-203ENST00000397876 FBXO31Q5XUX0 539 aaPredicted RBP22.46■■□□□ 1.19
SNRNP25-203ENST00000397876 ZC3H13Q5T200 1668 aaKnown RBP22.46■■□□□ 1.19
SNRNP25-203ENST00000397876 ABCC3O15438 1527 aa22.42■■□□□ 1.18
SNRNP25-203ENST00000397876 ZNF335Q9H4Z2 1342 aaPredicted RBP22.42■■□□□ 1.18
SNRNP25-203ENST00000397876 POLR1AO95602 1720 aaPredicted RBP22.42■■□□□ 1.18
SNRNP25-203ENST00000397876 DUOX2Q9NRD8 1548 aa22.41■■□□□ 1.18
SNRNP25-203ENST00000397876 NLRP1Q9C000 1473 aa22.41■■□□□ 1.18
SNRNP25-203ENST00000397876 CROCC2H7BZ55 1655 aa22.41■■□□□ 1.18
SNRNP25-203ENST00000397876 PTPN23Q9H3S7 1636 aa22.41■■□□□ 1.18
SNRNP25-203ENST00000397876 SHANK2Q9UPX8 1470 aa22.41■■□□□ 1.18
SNRNP25-203ENST00000397876 MROH1Q8NDA8 1641 aa22.39■■□□□ 1.17
SNRNP25-203ENST00000397876 NEURL4Q96JN8 1562 aa22.37■■□□□ 1.17
SNRNP25-203ENST00000397876 UGGT1Q9NYU2 1555 aa22.37■■□□□ 1.17
SNRNP25-203ENST00000397876 SPATA31D1Q6ZQQ2 1576 aa22.36■■□□□ 1.17
SNRNP25-203ENST00000397876 KIF15Q9NS87 1388 aa22.36■■□□□ 1.17
SNRNP25-203ENST00000397876 ABCC5O15440 1437 aa22.35■■□□□ 1.17
SNRNP25-203ENST00000397876 FGD6Q6ZV73 1430 aa22.35■■□□□ 1.17
SNRNP25-203ENST00000397876 THEMISQ8N1K5 641 aaPredicted RBP22.35■■□□□ 1.17
SNRNP25-203ENST00000397876 CEP152O94986 1710 aa22.34■■□□□ 1.17
SNRNP25-203ENST00000397876 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
SNRNP25-203ENST00000397876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.34■■□□□ 1.17
SNRNP25-203ENST00000397876 ERVK-7P63135 1459 aa22.34■■□□□ 1.17
SNRNP25-203ENST00000397876 DAPK1P53355 1430 aa22.33■■□□□ 1.17
SNRNP25-203ENST00000397876 PRDM15P57071 1507 aaPredicted RBP22.32■■□□□ 1.16
SNRNP25-203ENST00000397876 ANKLE2Q86XL3 938 aa22.32■■□□□ 1.16
SNRNP25-203ENST00000397876 DEPDC5O75140 1603 aa22.3■■□□□ 1.16
SNRNP25-203ENST00000397876 RRP7BPQ9NSQ0 103 aa22.29■■□□□ 1.16
SNRNP25-203ENST00000397876 CPS1P31327 1500 aa22.27■■□□□ 1.16
SNRNP25-203ENST00000397876 UBAP1LF5GYI3 381 aa22.27■■□□□ 1.16
SNRNP25-203ENST00000397876 NPHP4O75161 1426 aaPredicted RBP22.27■■□□□ 1.16
SNRNP25-203ENST00000397876 MED14O60244 1454 aa22.27■■□□□ 1.16
SNRNP25-203ENST00000397876 ANKRD30AQ9BXX3 1397 aa22.25■■□□□ 1.15
SNRNP25-203ENST00000397876 ARHGAP31Q2M1Z3 1444 aa22.25■■□□□ 1.15
SNRNP25-203ENST00000397876 IQGAP1P46940 1657 aa22.24■■□□□ 1.15
SNRNP25-203ENST00000397876 KANK1Q14678 1352 aa22.24■■□□□ 1.15
SNRNP25-203ENST00000397876 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
SNRNP25-203ENST00000397876 VWDEQ8N2E2 1590 aa22.22■■□□□ 1.15
SNRNP25-203ENST00000397876 UBR1Q8IWV7 1749 aa22.22■■□□□ 1.15
SNRNP25-203ENST00000397876 CFAP65Q6ZU64 1925 aaKnown RBP22.21■■□□□ 1.15
SNRNP25-203ENST00000397876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.21■■□□□ 1.156e-9■■■■■ 30.4
SNRNP25-203ENST00000397876 CHIC2Q9UKJ5 165 aa22.21■■□□□ 1.15
SNRNP25-203ENST00000397876 LMTK2Q8IWU2 1503 aa22.17■■□□□ 1.14
SNRNP25-203ENST00000397876 ADGRL2O95490 1459 aa22.17■■□□□ 1.14
SNRNP25-203ENST00000397876 SCAF11Q99590 1463 aaKnown RBP22.15■■□□□ 1.14
SNRNP25-203ENST00000397876 FAM50AQ14320 339 aaKnown RBP22.15■■□□□ 1.14
SNRNP25-203ENST00000397876 SLIT1O75093 1534 aa22.14■■□□□ 1.13
SNRNP25-203ENST00000397876 ARHGAP23Q9P227 1491 aa22.14■■□□□ 1.13
SNRNP25-203ENST00000397876 TOM1O60784 492 aa22.13■■□□□ 1.13
SNRNP25-203ENST00000397876 PIK3C2BO00750 1634 aa22.13■■□□□ 1.13
SNRNP25-203ENST00000397876 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
SNRNP25-203ENST00000397876 SYNMO15061 1565 aa22.12■■□□□ 1.13
SNRNP25-203ENST00000397876 EFCAB6Q5THR3 1501 aa22.11■■□□□ 1.13
SNRNP25-203ENST00000397876 PIP4K2BP78356 416 aa22.09■■□□□ 1.13
SNRNP25-203ENST00000397876 KDM5AP29375 1690 aaKnown RBP22.09■■□□□ 1.13
SNRNP25-203ENST00000397876 ANKRD50Q9ULJ7 1429 aa22.08■■□□□ 1.13
SNRNP25-203ENST00000397876 STRCP1A6NGW2 1772 aa22.08■■□□□ 1.13
SNRNP25-203ENST00000397876 TXNDC2Q86VQ3 553 aa22.08■■□□□ 1.13
SNRNP25-203ENST00000397876 STAG3Q9UJ98 1225 aa22.08■■□□□ 1.13
SNRNP25-203ENST00000397876 EID1Q9Y6B2 187 aa22.08■■□□□ 1.13
SNRNP25-203ENST00000397876 LRRC7Q96NW7 1537 aa22.06■■□□□ 1.12
SNRNP25-203ENST00000397876 LTKP29376 864 aa22.06■■□□□ 1.12
SNRNP25-203ENST00000397876 TMEM2Q9UHN6 1383 aa22.06■■□□□ 1.12
SNRNP25-203ENST00000397876 NOS1P29475 1434 aa22.05■■□□□ 1.12
SNRNP25-203ENST00000397876 ILDR2Q71H61 639 aa22.04■■□□□ 1.12
SNRNP25-203ENST00000397876 ADGRB3O60242 1522 aa22.03■■□□□ 1.12
SNRNP25-203ENST00000397876 RPRD2Q5VT52 1461 aaKnown RBP22.03■■□□□ 1.12
SNRNP25-203ENST00000397876 HSPA1LP34931 641 aa22.02■■□□□ 1.12
SNRNP25-203ENST00000397876 IDI1Q13907 227 aa22.02■■□□□ 1.12
SNRNP25-203ENST00000397876 ALKQ9UM73 1620 aa22.01■■□□□ 1.11
SNRNP25-203ENST00000397876 TET3O43151 1660 aa22.01■■□□□ 1.11
SNRNP25-203ENST00000397876 UNC13BO14795 1591 aa21.99■■□□□ 1.11
SNRNP25-203ENST00000397876 SLC52A1Q9NWF4 448 aa21.98■■□□□ 1.11
SNRNP25-203ENST00000397876 GCC2Q8IWJ2 1684 aa21.97■■□□□ 1.11
SNRNP25-203ENST00000397876 ROCK1Q13464 1354 aa21.97■■□□□ 1.11
SNRNP25-203ENST00000397876 SOCS7O14512 581 aa21.93■■□□□ 1.1
SNRNP25-203ENST00000397876 MED1Q15648 1581 aaPredicted RBP21.92■■□□□ 1.1
SNRNP25-203ENST00000397876 XIRP1Q702N8 1843 aaKnown RBP21.91■■□□□ 1.1
SNRNP25-203ENST00000397876 IQGAP3Q86VI3 1631 aa21.9■■□□□ 1.1
SNRNP25-203ENST00000397876 SLC26A8Q96RN1 970 aa21.89■■□□□ 1.09
SNRNP25-203ENST00000397876 E9PCH4 1651 aa21.88■■□□□ 1.09
SNRNP25-203ENST00000397876 KCNA6P17658 529 aa21.87■■□□□ 1.09
SNRNP25-203ENST00000397876 ITGAEP38570 1179 aa21.87■■□□□ 1.09
SNRNP25-203ENST00000397876 BCANQ96GW7 911 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 132.1 ms