RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 GPATCH8Q9UKJ3 1502 aaKnown RBP13.77□□□□□ -0.2
FGFR1-209ENST00000397113 TIMELESSQ9UNS1 1208 aa13.77□□□□□ -0.21
FGFR1-209ENST00000397113 L3MBTL2Q969R5 705 aa13.77□□□□□ -0.21
FGFR1-209ENST00000397113 PTPRGP23470 1445 aa13.76□□□□□ -0.21
FGFR1-209ENST00000397113 UACAQ9BZF9 1416 aa13.76□□□□□ -0.21
FGFR1-209ENST00000397113 KIF13AQ9H1H9 1805 aa13.76□□□□□ -0.21
FGFR1-209ENST00000397113 IFT172Q9UG01 1749 aa13.76□□□□□ -0.21
FGFR1-209ENST00000397113 ZMYM4Q5VZL5 1548 aa13.75□□□□□ -0.21
FGFR1-209ENST00000397113 MBD5Q9P267 1494 aa13.75□□□□□ -0.21
FGFR1-209ENST00000397113 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
FGFR1-209ENST00000397113 SKAP1Q86WV1 359 aa13.75□□□□□ -0.21
FGFR1-209ENST00000397113 KIAA1107Q9UPP5 1409 aa13.75□□□□□ -0.21
FGFR1-209ENST00000397113 PLB1Q6P1J6 1458 aa13.74□□□□□ -0.21
FGFR1-209ENST00000397113 ZC3H13Q5T200 1668 aaKnown RBP13.74□□□□□ -0.21
FGFR1-209ENST00000397113 RIMBP3CA6NJZ7 1639 aa13.74□□□□□ -0.21
FGFR1-209ENST00000397113 RIMBP3BA6NNM3 1639 aa13.74□□□□□ -0.21
FGFR1-209ENST00000397113 RIMBP3Q9UFD9 1639 aa13.74□□□□□ -0.21
FGFR1-209ENST00000397113 MROH1Q8NDA8 1641 aa13.73□□□□□ -0.21
FGFR1-209ENST00000397113 KDM6BO15054 1643 aa13.72□□□□□ -0.21
FGFR1-209ENST00000397113 KDM2AQ9Y2K7 1162 aa13.72□□□□□ -0.21
FGFR1-209ENST00000397113 PRG4Q92954 1404 aaPredicted RBP13.71□□□□□ -0.21
FGFR1-209ENST00000397113 CAMSAP2Q08AD1 1489 aa13.71□□□□□ -0.21
FGFR1-209ENST00000397113 FRMPD1Q5SYB0 1578 aa13.7□□□□□ -0.22
FGFR1-209ENST00000397113 SLC4A1APQ9BWU0 796 aaKnown RBP13.69□□□□□ -0.22
FGFR1-209ENST00000397113 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
FGFR1-209ENST00000397113 PLEKHH2Q8IVE3 1493 aa13.68□□□□□ -0.22
FGFR1-209ENST00000397113 ZFYVE16Q7Z3T8 1539 aa13.68□□□□□ -0.22
FGFR1-209ENST00000397113 ATP10AO60312 1499 aa13.68□□□□□ -0.22
FGFR1-209ENST00000397113 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
FGFR1-209ENST00000397113 PTPRKQ15262 1439 aa13.68□□□□□ -0.22
FGFR1-209ENST00000397113 LMTK2Q8IWU2 1503 aa13.68□□□□□ -0.22
FGFR1-209ENST00000397113 EXOC6Q8TAG9 804 aa13.68□□□□□ -0.22
FGFR1-209ENST00000397113 CEP152O94986 1710 aa13.68□□□□□ -0.22
FGFR1-209ENST00000397113 PLIN1O60240 522 aa13.67□□□□□ -0.22
FGFR1-209ENST00000397113 PRDM15P57071 1507 aaPredicted RBP13.66□□□□□ -0.22
FGFR1-209ENST00000397113 KDM5AP29375 1690 aaKnown RBP13.66□□□□□ -0.22
FGFR1-209ENST00000397113 TEX14Q8IWB6 1497 aa13.66□□□□□ -0.22
FGFR1-209ENST00000397113 ERICH6BQ5W0A0 696 aa13.66□□□□□ -0.22
FGFR1-209ENST00000397113 KIDINS220Q9ULH0 1771 aa13.66□□□□□ -0.22
FGFR1-209ENST00000397113 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
FGFR1-209ENST00000397113 NUDCQ9Y266 331 aa13.66□□□□□ -0.22
FGFR1-209ENST00000397113 DIP2BQ9P265 1576 aa13.66□□□□□ -0.22
FGFR1-209ENST00000397113 DAPK1P53355 1430 aa13.65□□□□□ -0.22
FGFR1-209ENST00000397113 KIAA1210Q9ULL0 1709 aa13.65□□□□□ -0.22
FGFR1-209ENST00000397113 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.23
FGFR1-209ENST00000397113 NAIPQ13075 1403 aa13.64□□□□□ -0.23
FGFR1-209ENST00000397113 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
FGFR1-209ENST00000397113 NBPF8Q3BBV2 869 aa13.62□□□□□ -0.23
FGFR1-209ENST00000397113 KIF7Q2M1P5 1343 aa13.61□□□□□ -0.23
FGFR1-209ENST00000397113 TET3O43151 1660 aa13.61□□□□□ -0.23
FGFR1-209ENST00000397113 PIK3C2BO00750 1634 aa13.61□□□□□ -0.23
FGFR1-209ENST00000397113 PDE4AP27815 886 aa13.61□□□□□ -0.23
FGFR1-209ENST00000397113 ABCC5O15440 1437 aa13.61□□□□□ -0.23
FGFR1-209ENST00000397113 RGS3P49796 1198 aa13.59□□□□□ -0.23
FGFR1-209ENST00000397113 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
FGFR1-209ENST00000397113 PLCH2O75038 1416 aa13.58□□□□□ -0.24
FGFR1-209ENST00000397113 CNTLNQ9NXG0 1405 aa13.57□□□□□ -0.24
FGFR1-209ENST00000397113 SPHKAPQ2M3C7 1700 aa13.56□□□□□ -0.24
FGFR1-209ENST00000397113 DUOX2Q9NRD8 1548 aa13.56□□□□□ -0.24
FGFR1-209ENST00000397113 RCAN3Q9UKA8 241 aa13.55□□□□□ -0.24
FGFR1-209ENST00000397113 ARHGEF12Q9NZN5 1544 aa13.55□□□□□ -0.24
FGFR1-209ENST00000397113 MROH2AA6NES4 1674 aa13.55□□□□□ -0.24
FGFR1-209ENST00000397113 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
FGFR1-209ENST00000397113 JPH4Q96JJ6 628 aa13.54□□□□□ -0.24
FGFR1-209ENST00000397113 ERBINQ96RT1 1412 aa13.54□□□□□ -0.24
FGFR1-209ENST00000397113 NEO1Q92859 1461 aa13.54□□□□□ -0.24
FGFR1-209ENST00000397113 CDCA7LQ96GN5 454 aa13.54□□□□□ -0.24
FGFR1-209ENST00000397113 PZPP20742 1482 aa13.53□□□□□ -0.24
FGFR1-209ENST00000397113 CCDC141Q6ZP82 1450 aa13.53□□□□□ -0.24
FGFR1-209ENST00000397113 HECW2Q9P2P5 1572 aa13.53□□□□□ -0.24
FGFR1-209ENST00000397113 CARD11Q9BXL7 1154 aa13.53□□□□□ -0.24
FGFR1-209ENST00000397113 E9PCH4 1651 aa13.52□□□□□ -0.24
FGFR1-209ENST00000397113 PPM1GO15355 546 aaPredicted RBP13.52□□□□□ -0.24
FGFR1-209ENST00000397113 RGL3Q3MIN7 710 aa13.52□□□□□ -0.25
FGFR1-209ENST00000397113 ABCA6Q8N139 1617 aa13.51□□□□□ -0.25
FGFR1-209ENST00000397113 RRP1P56182 461 aaKnown RBP13.51□□□□□ -0.25
FGFR1-209ENST00000397113 ZNF518AQ6AHZ1 1483 aa13.5□□□□□ -0.25
FGFR1-209ENST00000397113 MYO3AQ8NEV4 1616 aa13.5□□□□□ -0.25
FGFR1-209ENST00000397113 NCOA1Q15788 1441 aa13.49□□□□□ -0.25
FGFR1-209ENST00000397113 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
FGFR1-209ENST00000397113 ZNF644Q9H582 1327 aaPredicted RBP13.49□□□□□ -0.25
FGFR1-209ENST00000397113 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
FGFR1-209ENST00000397113 MLH3Q9UHC1 1453 aa13.48□□□□□ -0.25
FGFR1-209ENST00000397113 FRAT1Q92837 279 aaPredicted RBP13.48□□□□□ -0.25
FGFR1-209ENST00000397113 AGLP35573 1532 aa13.48□□□□□ -0.25
FGFR1-209ENST00000397113 GSE1Q14687 1217 aa13.48□□□□□ -0.25
FGFR1-209ENST00000397113 NFKBIBQ15653 356 aa13.47□□□□□ -0.25
FGFR1-209ENST00000397113 CRBNQ96SW2 442 aa13.47□□□□□ -0.25
FGFR1-209ENST00000397113 SIGLEC1Q9BZZ2 1709 aa13.47□□□□□ -0.25
FGFR1-209ENST00000397113 SPRYD3Q8NCJ5 442 aa13.46□□□□□ -0.25
FGFR1-209ENST00000397113 DIP2CQ9Y2E4 1556 aa13.46□□□□□ -0.25
FGFR1-209ENST00000397113 ST20-MTHFSA0A0A6YYL1 179 aa13.45□□□□□ -0.26
FGFR1-209ENST00000397113 SLKQ9H2G2 1235 aaPredicted RBP13.45□□□□□ -0.26
FGFR1-209ENST00000397113 TRPM1Q7Z4N2 1603 aa13.45□□□□□ -0.26
FGFR1-209ENST00000397113 ATP7AQ04656 1500 aa13.45□□□□□ -0.26
FGFR1-209ENST00000397113 ARID4BQ4LE39 1312 aaPredicted RBP13.45□□□□□ -0.26
FGFR1-209ENST00000397113 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
FGFR1-209ENST00000397113 TRPM2O94759 1503 aa13.44□□□□□ -0.26
FGFR1-209ENST00000397113 PNISRQ8TF01 805 aaKnown RBP13.44□□□□□ -0.26
FGFR1-209ENST00000397113 BACH2Q9BYV9 841 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms