RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FAM50AQ14320 339 aaKnown RBP22.43■■□□□ 1.18
SEC13-208ENST00000397109 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
SEC13-208ENST00000397109 WASHC2CQ9Y4E1 1318 aa22.41■■□□□ 1.18
SEC13-208ENST00000397109 RRP7BPQ9NSQ0 103 aa22.41■■□□□ 1.18
SEC13-208ENST00000397109 EIF2AK4Q9P2K8 1649 aaKnown RBP22.4■■□□□ 1.18
SEC13-208ENST00000397109 ANKRD30AQ9BXX3 1397 aa22.4■■□□□ 1.18
SEC13-208ENST00000397109 KDM5DQ9BY66 1539 aa22.39■■□□□ 1.17
SEC13-208ENST00000397109 PTPRKQ15262 1439 aa22.37■■□□□ 1.17
SEC13-208ENST00000397109 CHIC2Q9UKJ5 165 aa22.37■■□□□ 1.17
SEC13-208ENST00000397109 RNF17Q9BXT8 1623 aaKnown RBP22.37■■□□□ 1.17
SEC13-208ENST00000397109 ERBINQ96RT1 1412 aa22.36■■□□□ 1.17
SEC13-208ENST00000397109 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
SEC13-208ENST00000397109 NCOA1Q15788 1441 aa22.34■■□□□ 1.17
SEC13-208ENST00000397109 ADGRL2O95490 1459 aa22.32■■□□□ 1.16
SEC13-208ENST00000397109 PZPP20742 1482 aa22.31■■□□□ 1.16
SEC13-208ENST00000397109 DMRT2Q9Y5R5 561 aa22.29■■□□□ 1.16
SEC13-208ENST00000397109 ZC3H13Q5T200 1668 aaKnown RBP22.29■■□□□ 1.16
SEC13-208ENST00000397109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
SEC13-208ENST00000397109 ABCC3O15438 1527 aa22.28■■□□□ 1.16
SEC13-208ENST00000397109 FBXO31Q5XUX0 539 aaPredicted RBP22.28■■□□□ 1.16
SEC13-208ENST00000397109 MROH1Q8NDA8 1641 aa22.27■■□□□ 1.16
SEC13-208ENST00000397109 TNRQ92752 1358 aa22.27■■□□□ 1.16
SEC13-208ENST00000397109 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
SEC13-208ENST00000397109 KANK1Q14678 1352 aa22.25■■□□□ 1.15
SEC13-208ENST00000397109 PRDM15P57071 1507 aaPredicted RBP22.24■■□□□ 1.15
SEC13-208ENST00000397109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.24■■□□□ 1.15
SEC13-208ENST00000397109 ZNF142P52746 1687 aaPredicted RBP22.23■■□□□ 1.15
SEC13-208ENST00000397109 CEP170BQ9Y4F5 1589 aaPredicted RBP22.23■■□□□ 1.15
SEC13-208ENST00000397109 STRCQ7RTU9 1775 aa22.23■■□□□ 1.15
SEC13-208ENST00000397109 A2ML1A8K2U0 1454 aa22.22■■□□□ 1.15
SEC13-208ENST00000397109 DEPDC5O75140 1603 aa22.22■■□□□ 1.15
SEC13-208ENST00000397109 ROCK1Q13464 1354 aa22.22■■□□□ 1.15
SEC13-208ENST00000397109 ANKRD50Q9ULJ7 1429 aa22.21■■□□□ 1.15
SEC13-208ENST00000397109 CEP152O94986 1710 aa22.2■■□□□ 1.14
SEC13-208ENST00000397109 CAMSAP1Q5T5Y3 1602 aa22.2■■□□□ 1.14
SEC13-208ENST00000397109 ARHGAP31Q2M1Z3 1444 aa22.19■■□□□ 1.14
SEC13-208ENST00000397109 NLRP1Q9C000 1473 aa22.18■■□□□ 1.14
SEC13-208ENST00000397109 PTPRTO14522 1441 aa22.18■■□□□ 1.14
SEC13-208ENST00000397109 RRBP1Q9P2E9 1410 aaKnown RBP22.18■■□□□ 1.14
SEC13-208ENST00000397109 PLA2R1Q13018 1463 aa22.18■■□□□ 1.14
SEC13-208ENST00000397109 ITGAEP38570 1179 aa22.17■■□□□ 1.14
SEC13-208ENST00000397109 PKD2Q13563 968 aa22.16■■□□□ 1.14
SEC13-208ENST00000397109 ERVK-7P63135 1459 aa22.16■■□□□ 1.14
SEC13-208ENST00000397109 SPATA31D1Q6ZQQ2 1576 aa22.16■■□□□ 1.14
SEC13-208ENST00000397109 CFAP65Q6ZU64 1925 aaKnown RBP22.15■■□□□ 1.14
SEC13-208ENST00000397109 LMTK2Q8IWU2 1503 aa22.14■■□□□ 1.14
SEC13-208ENST00000397109 VWDEQ8N2E2 1590 aa22.14■■□□□ 1.13
SEC13-208ENST00000397109 THEMISQ8N1K5 641 aaPredicted RBP22.14■■□□□ 1.13
SEC13-208ENST00000397109 NCKAP5LQ9HCH0 1330 aa22.12■■□□□ 1.13
SEC13-208ENST00000397109 UGGT1Q9NYU2 1555 aa22.09■■□□□ 1.13
SEC13-208ENST00000397109 ILDR1Q86SU0 546 aaPredicted RBP22.07■■□□□ 1.12
SEC13-208ENST00000397109 ANKLE2Q86XL3 938 aa22.06■■□□□ 1.12
SEC13-208ENST00000397109 EFCAB6Q5THR3 1501 aa22.05■■□□□ 1.12
SEC13-208ENST00000397109 UNC13BO14795 1591 aa22.04■■□□□ 1.12
SEC13-208ENST00000397109 CERKQ8TCT0 537 aa22.04■■□□□ 1.12
SEC13-208ENST00000397109 FBXO41Q8TF61 875 aa22.03■■□□□ 1.12
SEC13-208ENST00000397109 RPRD2Q5VT52 1461 aaKnown RBP22.03■■□□□ 1.12
SEC13-208ENST00000397109 NOS1P29475 1434 aa22■■□□□ 1.11
SEC13-208ENST00000397109 TET3O43151 1660 aa22■■□□□ 1.11
SEC13-208ENST00000397109 POLR1AO95602 1720 aaPredicted RBP22■■□□□ 1.11
SEC13-208ENST00000397109 NUP155O75694 1391 aa21.99■■□□□ 1.11
SEC13-208ENST00000397109 SLC52A1Q9NWF4 448 aa21.98■■□□□ 1.11
SEC13-208ENST00000397109 STAG3Q9UJ98 1225 aa21.98■■□□□ 1.11
SEC13-208ENST00000397109 IDI1Q13907 227 aa21.97■■□□□ 1.11
SEC13-208ENST00000397109 UBR1Q8IWV7 1749 aa21.97■■□□□ 1.11
SEC13-208ENST00000397109 GCC2Q8IWJ2 1684 aa21.97■■□□□ 1.11
SEC13-208ENST00000397109 IQGAP3Q86VI3 1631 aa21.96■■□□□ 1.11
SEC13-208ENST00000397109 NAIPQ13075 1403 aa21.96■■□□□ 1.11
SEC13-208ENST00000397109 MED14O60244 1454 aa21.95■■□□□ 1.1
SEC13-208ENST00000397109 NEURL4Q96JN8 1562 aa21.95■■□□□ 1.1
SEC13-208ENST00000397109 SYNMO15061 1565 aa21.94■■□□□ 1.1
SEC13-208ENST00000397109 NPHP4O75161 1426 aaPredicted RBP21.93■■□□□ 1.1
SEC13-208ENST00000397109 PIK3C2BO00750 1634 aa21.93■■□□□ 1.1
SEC13-208ENST00000397109 LTBP4Q8N2S1 1624 aa21.93■■□□□ 1.1
SEC13-208ENST00000397109 KDM5AP29375 1690 aaKnown RBP21.92■■□□□ 1.1
SEC13-208ENST00000397109 EID1Q9Y6B2 187 aa21.92■■□□□ 1.1
SEC13-208ENST00000397109 HFM1A2PYH4 1435 aa21.92■■□□□ 1.1
SEC13-208ENST00000397109 ZNF335Q9H4Z2 1342 aaPredicted RBP21.92■■□□□ 1.1
SEC13-208ENST00000397109 ARHGAP23Q9P227 1491 aa21.92■■□□□ 1.1
SEC13-208ENST00000397109 SLIT1O75093 1534 aa21.91■■□□□ 1.1
SEC13-208ENST00000397109 TXNDC2Q86VQ3 553 aa21.9■■□□□ 1.1
SEC13-208ENST00000397109 SCAF11Q99590 1463 aaKnown RBP21.9■■□□□ 1.1
SEC13-208ENST00000397109 E9PCH4 1651 aa21.89■■□□□ 1.09
SEC13-208ENST00000397109 TMEM2Q9UHN6 1383 aa21.89■■□□□ 1.09
SEC13-208ENST00000397109 IQSEC2Q5JU85 1478 aa21.87■■□□□ 1.09
SEC13-208ENST00000397109 LTKP29376 864 aa21.87■■□□□ 1.09
SEC13-208ENST00000397109 IQGAP1P46940 1657 aa21.86■■□□□ 1.09
SEC13-208ENST00000397109 ADGRB3O60242 1522 aa21.86■■□□□ 1.09
SEC13-208ENST00000397109 TRIM52Q96A61 297 aa21.83■■□□□ 1.09
SEC13-208ENST00000397109 HDGFP51858 240 aaKnown RBP21.83■■□□□ 1.08
SEC13-208ENST00000397109 CPS1P31327 1500 aa21.8■■□□□ 1.08
SEC13-208ENST00000397109 CHGAP10645 457 aaKnown RBP21.79■■□□□ 1.08
SEC13-208ENST00000397109 TMEM131LA2VDJ0 1609 aa21.78■■□□□ 1.08
SEC13-208ENST00000397109 ACIN1Q9UKV3 1341 aaKnown RBP21.77■■□□□ 1.08
SEC13-208ENST00000397109 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.76■■□□□ 1.07
SEC13-208ENST00000397109 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
SEC13-208ENST00000397109 SPHKAPQ2M3C7 1700 aa21.75■■□□□ 1.07
SEC13-208ENST00000397109 MYO5BQ9ULV0 1848 aa21.75■■□□□ 1.07
SEC13-208ENST00000397109 RIMS2Q9UQ26 1411 aa21.75■■□□□ 1.07
SEC13-208ENST00000397109 ZFYVE9O95405 1425 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms