RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 A2MP01023 1474 aa16.6■□□□□ 0.25
FGFR1-208ENST00000397108 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
FGFR1-208ENST00000397108 ABCC5O15440 1437 aa16.59■□□□□ 0.25
FGFR1-208ENST00000397108 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
FGFR1-208ENST00000397108 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
FGFR1-208ENST00000397108 DAPK1P53355 1430 aa16.59■□□□□ 0.25
FGFR1-208ENST00000397108 MADDQ8WXG6 1647 aa16.58■□□□□ 0.25
FGFR1-208ENST00000397108 FER1L4A9Z1Z3 1794 aa16.57■□□□□ 0.24
FGFR1-208ENST00000397108 DDX10Q13206 875 aaKnown RBP16.55■□□□□ 0.24
FGFR1-208ENST00000397108 RIMS1Q86UR5 1692 aaKnown RBP16.54■□□□□ 0.24
FGFR1-208ENST00000397108 DHX29Q7Z478 1369 aaKnown RBP16.54■□□□□ 0.24
FGFR1-208ENST00000397108 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
FGFR1-208ENST00000397108 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
FGFR1-208ENST00000397108 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.54■□□□□ 0.244e-8■□□□□ 10.2
FGFR1-208ENST00000397108 RRBP1Q9P2E9 1410 aaKnown RBP16.52■□□□□ 0.23
FGFR1-208ENST00000397108 MLECQ14165 292 aa16.51■□□□□ 0.23
FGFR1-208ENST00000397108 EIF2AK4Q9P2K8 1649 aaKnown RBP16.51■□□□□ 0.23
FGFR1-208ENST00000397108 PTPRMP28827 1452 aa16.51■□□□□ 0.23
FGFR1-208ENST00000397108 DUOX2Q9NRD8 1548 aa16.5■□□□□ 0.23
FGFR1-208ENST00000397108 ADGRL2O95490 1459 aa16.5■□□□□ 0.23
FGFR1-208ENST00000397108 IRX6P78412 446 aaPredicted RBP16.49■□□□□ 0.23
FGFR1-208ENST00000397108 DEKP35659 375 aaKnown RBP16.48■□□□□ 0.23
FGFR1-208ENST00000397108 ANKRD30AQ9BXX3 1397 aa16.48■□□□□ 0.23
FGFR1-208ENST00000397108 KIF15Q9NS87 1388 aa16.48■□□□□ 0.23
FGFR1-208ENST00000397108 ANO8Q9HCE9 1232 aaPredicted RBP16.47■□□□□ 0.23
FGFR1-208ENST00000397108 RNF17Q9BXT8 1623 aaKnown RBP16.47■□□□□ 0.23
FGFR1-208ENST00000397108 NCOA1Q15788 1441 aa16.47■□□□□ 0.23
FGFR1-208ENST00000397108 MROH2AA6NES4 1674 aa16.46■□□□□ 0.23
FGFR1-208ENST00000397108 PTPRKQ15262 1439 aa16.46■□□□□ 0.22
FGFR1-208ENST00000397108 ERBINQ96RT1 1412 aa16.46■□□□□ 0.22
FGFR1-208ENST00000397108 CNTLNQ9NXG0 1405 aa16.45■□□□□ 0.22
FGFR1-208ENST00000397108 HIRIP3Q9BW71 556 aaPredicted RBP16.45■□□□□ 0.22
FGFR1-208ENST00000397108 FAM135AQ9P2D6 1515 aa16.45■□□□□ 0.22
FGFR1-208ENST00000397108 CHIC2Q9UKJ5 165 aa16.44■□□□□ 0.22
FGFR1-208ENST00000397108 CLTCQ00610 1675 aaKnown RBP16.44■□□□□ 0.22
FGFR1-208ENST00000397108 RRP7BPQ9NSQ0 103 aa16.44■□□□□ 0.22
FGFR1-208ENST00000397108 KIF3BO15066 747 aa16.43■□□□□ 0.22
FGFR1-208ENST00000397108 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
FGFR1-208ENST00000397108 ROCK1Q13464 1354 aa16.43■□□□□ 0.22
FGFR1-208ENST00000397108 C3P01024 1663 aa16.43■□□□□ 0.22
FGFR1-208ENST00000397108 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
FGFR1-208ENST00000397108 MROH1Q8NDA8 1641 aa16.41■□□□□ 0.22
FGFR1-208ENST00000397108 GGT6Q6P531 493 aa16.41■□□□□ 0.22
FGFR1-208ENST00000397108 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
FGFR1-208ENST00000397108 ESF1Q9H501 851 aaKnown RBP16.4■□□□□ 0.22
FGFR1-208ENST00000397108 KDM5DQ9BY66 1539 aa16.4■□□□□ 0.22
FGFR1-208ENST00000397108 ZC3H13Q5T200 1668 aaKnown RBP16.4■□□□□ 0.22
FGFR1-208ENST00000397108 PRDM15P57071 1507 aaPredicted RBP16.39■□□□□ 0.21
FGFR1-208ENST00000397108 NBR1Q14596 966 aa16.37■□□□□ 0.21
FGFR1-208ENST00000397108 ANKRD50Q9ULJ7 1429 aa16.36■□□□□ 0.21
FGFR1-208ENST00000397108 ABCC3O15438 1527 aa16.36■□□□□ 0.21
FGFR1-208ENST00000397108 ZMYM3Q14202 1370 aa16.35■□□□□ 0.21
FGFR1-208ENST00000397108 CEP152O94986 1710 aa16.35■□□□□ 0.21
FGFR1-208ENST00000397108 SETD1BQ9UPS6 1966 aaKnown RBP16.34■□□□□ 0.21
FGFR1-208ENST00000397108 CEBPAP49715 358 aaPredicted RBP16.34■□□□□ 0.21
FGFR1-208ENST00000397108 PREX1Q8TCU6 1659 aa16.34■□□□□ 0.21
FGFR1-208ENST00000397108 GCC2Q8IWJ2 1684 aa16.33■□□□□ 0.21
FGFR1-208ENST00000397108 NPATQ14207 1427 aa16.33■□□□□ 0.2
FGFR1-208ENST00000397108 VWDEQ8N2E2 1590 aa16.33■□□□□ 0.2
FGFR1-208ENST00000397108 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.2
FGFR1-208ENST00000397108 PLPPR3Q6T4P5 718 aa16.32■□□□□ 0.2
FGFR1-208ENST00000397108 CAMSAP1Q5T5Y3 1602 aa16.32■□□□□ 0.2
FGFR1-208ENST00000397108 UNC13BO14795 1591 aa16.32■□□□□ 0.2
FGFR1-208ENST00000397108 PZPP20742 1482 aa16.3■□□□□ 0.2
FGFR1-208ENST00000397108 ANP32CO43423 234 aa16.3■□□□□ 0.2
FGFR1-208ENST00000397108 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
FGFR1-208ENST00000397108 LMTK3Q96Q04 1460 aa16.3■□□□□ 0.2
FGFR1-208ENST00000397108 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
FGFR1-208ENST00000397108 SIN3AQ96ST3 1273 aa16.29■□□□□ 0.2
FGFR1-208ENST00000397108 KANK1Q14678 1352 aa16.29■□□□□ 0.2
FGFR1-208ENST00000397108 LMTK2Q8IWU2 1503 aa16.29■□□□□ 0.2
FGFR1-208ENST00000397108 NAIPQ13075 1403 aa16.28■□□□□ 0.2
FGFR1-208ENST00000397108 CCDC136Q96JN2 1154 aa16.28■□□□□ 0.2
FGFR1-208ENST00000397108 HFM1A2PYH4 1435 aa16.27■□□□□ 0.2
FGFR1-208ENST00000397108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.26■□□□□ 0.196e-7■■□□□ 13.1
FGFR1-208ENST00000397108 MYO3AQ8NEV4 1616 aa16.26■□□□□ 0.19
FGFR1-208ENST00000397108 ARHGAP31Q2M1Z3 1444 aa16.25■□□□□ 0.19
FGFR1-208ENST00000397108 UHRF1BP1Q6BDS2 1440 aa16.25■□□□□ 0.19
FGFR1-208ENST00000397108 IQGAP3Q86VI3 1631 aa16.25■□□□□ 0.19
FGFR1-208ENST00000397108 ZNF142P52746 1687 aaPredicted RBP16.25■□□□□ 0.19
FGFR1-208ENST00000397108 TET3O43151 1660 aa16.24■□□□□ 0.19
FGFR1-208ENST00000397108 HNRNPUQ00839 825 aaKnown RBP eCLIP16.24■□□□□ 0.194e-7■■□□□ 13.9
FGFR1-208ENST00000397108 EFCAB6Q5THR3 1501 aa16.24■□□□□ 0.19
FGFR1-208ENST00000397108 SPATA31D1Q6ZQQ2 1576 aa16.24■□□□□ 0.19
FGFR1-208ENST00000397108 CCER2I3L3R5 266 aa16.22■□□□□ 0.19
FGFR1-208ENST00000397108 PAK3O75914 559 aaPredicted RBP16.22■□□□□ 0.19
FGFR1-208ENST00000397108 CFAP65Q6ZU64 1925 aaKnown RBP16.22■□□□□ 0.19
FGFR1-208ENST00000397108 ERVK-7P63135 1459 aa16.22■□□□□ 0.19
FGFR1-208ENST00000397108 RTN4Q9NQC3 1192 aaKnown RBP16.22■□□□□ 0.19
FGFR1-208ENST00000397108 TNRQ92752 1358 aa16.21■□□□□ 0.19
FGFR1-208ENST00000397108 FBXO31Q5XUX0 539 aaPredicted RBP16.2■□□□□ 0.18
FGFR1-208ENST00000397108 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
FGFR1-208ENST00000397108 B4GALNT3Q6L9W6 998 aa16.19■□□□□ 0.18
FGFR1-208ENST00000397108 RPRD2Q5VT52 1461 aaKnown RBP16.19■□□□□ 0.18
FGFR1-208ENST00000397108 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
FGFR1-208ENST00000397108 NUP155O75694 1391 aa16.18■□□□□ 0.18
FGFR1-208ENST00000397108 RAB3GAP2Q9H2M9 1393 aa16.18■□□□□ 0.18
FGFR1-208ENST00000397108 A2ML1A8K2U0 1454 aa16.17■□□□□ 0.18
FGFR1-208ENST00000397108 NLRP1Q9C000 1473 aa16.17■□□□□ 0.18
FGFR1-208ENST00000397108 E9PCH4 1651 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms