RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 GPATCH8Q9UKJ3 1502 aaKnown RBP19.34■□□□□ 0.69
CCNF-202ENST00000397066 LRPPRCP42704 1394 aaKnown RBP19.34■□□□□ 0.69
CCNF-202ENST00000397066 PANK3Q9H999 370 aa19.34■□□□□ 0.69
CCNF-202ENST00000397066 RALGAPBQ86X10 1494 aa19.34■□□□□ 0.69
CCNF-202ENST00000397066 TARBP1Q13395 1621 aaKnown RBP19.34■□□□□ 0.69
CCNF-202ENST00000397066 NBPF1Q3BBV0 1214 aa19.34■□□□□ 0.69
CCNF-202ENST00000397066 PLB1Q6P1J6 1458 aa19.33■□□□□ 0.68
CCNF-202ENST00000397066 USP35Q9P2H5 1018 aa19.32■□□□□ 0.68
CCNF-202ENST00000397066 MBD5Q9P267 1494 aa19.32■□□□□ 0.68
CCNF-202ENST00000397066 KIF14Q15058 1648 aa19.32■□□□□ 0.68
CCNF-202ENST00000397066 C9orf84Q5VXU9 1444 aa19.32■□□□□ 0.68
CCNF-202ENST00000397066 TMF1P82094 1093 aa19.31■□□□□ 0.68
CCNF-202ENST00000397066 IL27Q8NEV9 243 aa19.31■□□□□ 0.68
CCNF-202ENST00000397066 RAPGEF6Q8TEU7 1601 aa19.31■□□□□ 0.68
CCNF-202ENST00000397066 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
CCNF-202ENST00000397066 SLC4A3P48751 1232 aa19.31■□□□□ 0.68
CCNF-202ENST00000397066 JPH4Q96JJ6 628 aa19.31■□□□□ 0.68
CCNF-202ENST00000397066 CARMIL2Q6F5E8 1435 aa19.3■□□□□ 0.68
CCNF-202ENST00000397066 KDM5CP41229 1560 aa19.3■□□□□ 0.68
CCNF-202ENST00000397066 DISP1Q96F81 1524 aa19.3■□□□□ 0.68
CCNF-202ENST00000397066 ZNF608Q9ULD9 1512 aaPredicted RBP19.3■□□□□ 0.68
CCNF-202ENST00000397066 KIAA0556O60303 1618 aa19.29■□□□□ 0.68
CCNF-202ENST00000397066 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
CCNF-202ENST00000397066 KNSTRNQ9Y448 316 aa19.29■□□□□ 0.68
CCNF-202ENST00000397066 RGS3P49796 1198 aa19.28■□□□□ 0.68
CCNF-202ENST00000397066 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.28■□□□□ 0.68
CCNF-202ENST00000397066 POLR1AO95602 1720 aaPredicted RBP19.28■□□□□ 0.68
CCNF-202ENST00000397066 UHRF1BP1Q6BDS2 1440 aa19.28■□□□□ 0.68
CCNF-202ENST00000397066 MRC2Q9UBG0 1479 aa19.26■□□□□ 0.67
CCNF-202ENST00000397066 ADAMTS8Q9UP79 889 aa19.23■□□□□ 0.67
CCNF-202ENST00000397066 ADGRL2O95490 1459 aa19.23■□□□□ 0.67
CCNF-202ENST00000397066 C20orf194Q5TEA3 1177 aa19.23■□□□□ 0.67
CCNF-202ENST00000397066 PARD3Q8TEW0 1356 aa19.23■□□□□ 0.67
CCNF-202ENST00000397066 GRIN2AQ12879 1464 aa19.22■□□□□ 0.67
CCNF-202ENST00000397066 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
CCNF-202ENST00000397066 ITSN2Q9NZM3 1697 aa19.21■□□□□ 0.67
CCNF-202ENST00000397066 ANO8Q9HCE9 1232 aaPredicted RBP19.21■□□□□ 0.67
CCNF-202ENST00000397066 CANXP27824 592 aaKnown RBP19.2■□□□□ 0.66
CCNF-202ENST00000397066 ARHGEF12Q9NZN5 1544 aa19.2■□□□□ 0.66
CCNF-202ENST00000397066 PER1O15534 1290 aaPredicted RBP19.19■□□□□ 0.66
CCNF-202ENST00000397066 CENPQQ7L2Z9 268 aaPredicted RBP19.19■□□□□ 0.66
CCNF-202ENST00000397066 GOLGA2Q08379 1002 aa19.18■□□□□ 0.66
CCNF-202ENST00000397066 ADGBQ8N7X0 1667 aa19.18■□□□□ 0.66
CCNF-202ENST00000397066 WASHC2CQ9Y4E1 1318 aa19.18■□□□□ 0.66
CCNF-202ENST00000397066 GSE1Q14687 1217 aa19.17■□□□□ 0.66
CCNF-202ENST00000397066 NFKBIBQ15653 356 aa19.17■□□□□ 0.66
CCNF-202ENST00000397066 DISP3Q9P2K9 1392 aa19.16■□□□□ 0.66
CCNF-202ENST00000397066 FAM161AQ3B820 660 aa19.16■□□□□ 0.66
CCNF-202ENST00000397066 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
CCNF-202ENST00000397066 MAGI1Q96QZ7 1491 aaPredicted RBP19.14■□□□□ 0.65
CCNF-202ENST00000397066 ERBINQ96RT1 1412 aa19.13■□□□□ 0.65
CCNF-202ENST00000397066 RSPH4AQ5TD94 716 aa19.13■□□□□ 0.65
CCNF-202ENST00000397066 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.13■□□□□ 0.65
CCNF-202ENST00000397066 PRAG1Q86YV5 1406 aa19.13■□□□□ 0.65
CCNF-202ENST00000397066 CDCA8Q53HL2 280 aa19.11■□□□□ 0.65
CCNF-202ENST00000397066 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
CCNF-202ENST00000397066 BRPF3Q9ULD4 1205 aa19.11■□□□□ 0.65
CCNF-202ENST00000397066 TESK2Q96S53 571 aa19.1■□□□□ 0.65
CCNF-202ENST00000397066 ERCC6Q03468 1493 aa19.1■□□□□ 0.65
CCNF-202ENST00000397066 EIF5BO60841 1220 aaKnown RBP19.09■□□□□ 0.65
CCNF-202ENST00000397066 FRAT1Q92837 279 aaPredicted RBP19.08■□□□□ 0.64
CCNF-202ENST00000397066 SHANK2Q9UPX8 1470 aa19.07■□□□□ 0.64
CCNF-202ENST00000397066 DUSP27Q5VZP5 1158 aa19.06■□□□□ 0.64
CCNF-202ENST00000397066 FAM135AQ9P2D6 1515 aa19.06■□□□□ 0.64
CCNF-202ENST00000397066 APAF1O14727 1248 aa19.06■□□□□ 0.64
CCNF-202ENST00000397066 ATP10BO94823 1461 aa19.05■□□□□ 0.64
CCNF-202ENST00000397066 CCDC141Q6ZP82 1450 aa19.04■□□□□ 0.64
CCNF-202ENST00000397066 NEUROD2Q15784 382 aa19.04■□□□□ 0.64
CCNF-202ENST00000397066 PTPRGP23470 1445 aa19.03■□□□□ 0.64
CCNF-202ENST00000397066 BLMP54132 1417 aaPredicted RBP19.03■□□□□ 0.64
CCNF-202ENST00000397066 PLEKHH2Q8IVE3 1493 aa19.03■□□□□ 0.64
CCNF-202ENST00000397066 COL17A1Q9UMD9 1497 aaPredicted RBP19.03■□□□□ 0.64
CCNF-202ENST00000397066 FRAT2O75474 233 aaPredicted RBP19.03■□□□□ 0.64
CCNF-202ENST00000397066 CEP170Q5SW79 1584 aa19.02■□□□□ 0.64
CCNF-202ENST00000397066 PLEKHH1Q9ULM0 1364 aa19.02■□□□□ 0.63
CCNF-202ENST00000397066 CROCC2H7BZ55 1655 aa19.02■□□□□ 0.63
CCNF-202ENST00000397066 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
CCNF-202ENST00000397066 BCAR3O75815 825 aa19.01■□□□□ 0.63
CCNF-202ENST00000397066 KDM2BQ8NHM5 1336 aa19.01■□□□□ 0.63
CCNF-202ENST00000397066 BECN1Q14457 450 aa19■□□□□ 0.63
CCNF-202ENST00000397066 C8orf34Q49A92 452 aa19■□□□□ 0.63
CCNF-202ENST00000397066 UPF2Q9HAU5 1272 aaKnown RBP19■□□□□ 0.63
CCNF-202ENST00000397066 A2MP01023 1474 aa18.99■□□□□ 0.63
CCNF-202ENST00000397066 SLFN5Q08AF3 891 aa18.99■□□□□ 0.63
CCNF-202ENST00000397066 ARXQ96QS3 562 aa18.98■□□□□ 0.63
CCNF-202ENST00000397066 ABCC10Q5T3U5 1492 aa18.98■□□□□ 0.63
CCNF-202ENST00000397066 TNNT2P45379 298 aaPredicted RBP18.98■□□□□ 0.63
CCNF-202ENST00000397066 SLKQ9H2G2 1235 aaPredicted RBP18.98■□□□□ 0.63
CCNF-202ENST00000397066 ZMYM4Q5VZL5 1548 aa18.98■□□□□ 0.63
CCNF-202ENST00000397066 KDM5DQ9BY66 1539 aa18.98■□□□□ 0.63
CCNF-202ENST00000397066 GPRASP1Q5JY77 1395 aa18.97■□□□□ 0.63
CCNF-202ENST00000397066 EIF4G3O43432 1585 aaKnown RBP18.97■□□□□ 0.63
CCNF-202ENST00000397066 E9PSI1 815 aa18.96■□□□□ 0.63
CCNF-202ENST00000397066 COG6Q9Y2V7 657 aa18.96■□□□□ 0.63
CCNF-202ENST00000397066 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
CCNF-202ENST00000397066 ADCY10Q96PN6 1610 aa18.95■□□□□ 0.62
CCNF-202ENST00000397066 AMER1Q5JTC6 1135 aaPredicted RBP18.94■□□□□ 0.62
CCNF-202ENST00000397066 CENPJQ9HC77 1338 aaPredicted RBP18.94■□□□□ 0.62
CCNF-202ENST00000397066 INSRP06213 1382 aa18.94■□□□□ 0.62
CCNF-202ENST00000397066 PANK1Q8TE04 598 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms