RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 TTC5Q8N0Z6 440 aa21.8■■□□□ 1.08
MCF2L-208ENST00000397030 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
MCF2L-208ENST00000397030 FOXD4L5Q5VV16 416 aaPredicted RBP21.79■■□□□ 1.08
MCF2L-208ENST00000397030 FOXD4L4Q8WXT5 416 aaPredicted RBP21.79■■□□□ 1.08
MCF2L-208ENST00000397030 CLUAP1Q96AJ1 413 aa21.79■■□□□ 1.08
MCF2L-208ENST00000397030 VPS37DQ86XT2 251 aa21.79■■□□□ 1.08
MCF2L-208ENST00000397030 GZF1Q9H116 711 aaPredicted RBP21.78■■□□□ 1.08
MCF2L-208ENST00000397030 DHX16O60231 1041 aaKnown RBP21.78■■□□□ 1.08
MCF2L-208ENST00000397030 NECTIN2Q92692 538 aa21.78■■□□□ 1.08
MCF2L-208ENST00000397030 NOP58Q9Y2X3 529 aaKnown RBP21.78■■□□□ 1.08
MCF2L-208ENST00000397030 EIF2S2P20042 333 aaKnown RBP21.77■■□□□ 1.08
MCF2L-208ENST00000397030 AMOTL1Q8IY63 956 aa21.77■■□□□ 1.08
MCF2L-208ENST00000397030 CHMP4AQ9BY43 222 aa21.76■■□□□ 1.07
MCF2L-208ENST00000397030 PSME1Q06323 249 aa21.76■■□□□ 1.07
MCF2L-208ENST00000397030 HMMRO75330 724 aa21.75■■□□□ 1.07
MCF2L-208ENST00000397030 ARHGAP35Q9NRY4 1499 aa21.75■■□□□ 1.07
MCF2L-208ENST00000397030 RWDD1Q9H446 243 aaPredicted RBP21.75■■□□□ 1.07
MCF2L-208ENST00000397030 TDRD9Q8NDG6 1382 aaKnown RBP21.75■■□□□ 1.07
MCF2L-208ENST00000397030 ELL2O00472 640 aaPredicted RBP21.74■■□□□ 1.07
MCF2L-208ENST00000397030 CECR2Q9BXF3 1484 aa21.74■■□□□ 1.07
MCF2L-208ENST00000397030 CCDC34Q96HJ3 373 aa21.74■■□□□ 1.07
MCF2L-208ENST00000397030 RRP7AQ9Y3A4 280 aaKnown RBP21.74■■□□□ 1.07
MCF2L-208ENST00000397030 HDAC5Q9UQL6 1122 aa21.73■■□□□ 1.07
MCF2L-208ENST00000397030 AKAP17AQ02040 695 aaKnown RBP21.73■■□□□ 1.07
MCF2L-208ENST00000397030 TPD52L1Q16890 204 aaPredicted RBP21.71■■□□□ 1.07
MCF2L-208ENST00000397030 RILPL2Q969X0 211 aa21.71■■□□□ 1.07
MCF2L-208ENST00000397030 SF3A1Q15459 793 aaKnown RBP21.71■■□□□ 1.07
MCF2L-208ENST00000397030 SLKQ9H2G2 1235 aaPredicted RBP21.7■■□□□ 1.06
MCF2L-208ENST00000397030 COG3Q96JB2 828 aa21.69■■□□□ 1.06
MCF2L-208ENST00000397030 RBM33Q96EV2 1170 aaKnown RBP21.69■■□□□ 1.06
MCF2L-208ENST00000397030 TEFQ10587 303 aa21.69■■□□□ 1.06
MCF2L-208ENST00000397030 APPP05067 770 aa21.68■■□□□ 1.06
MCF2L-208ENST00000397030 ANKRD30AQ9BXX3 1397 aa21.68■■□□□ 1.06
MCF2L-208ENST00000397030 SOGA1O94964 1423 aa21.67■■□□□ 1.06
MCF2L-208ENST00000397030 FYB1O15117 783 aa21.67■■□□□ 1.06
MCF2L-208ENST00000397030 PDS5BQ9NTI5 1447 aa21.67■■□□□ 1.06
MCF2L-208ENST00000397030 ATF3P18847 181 aa21.67■■□□□ 1.06
MCF2L-208ENST00000397030 LMOD3Q0VAK6 560 aa21.67■■□□□ 1.06
MCF2L-208ENST00000397030 MINK1Q8N4C8 1332 aaPredicted RBP21.66■■□□□ 1.06
MCF2L-208ENST00000397030 H3BQV1 296 aa21.66■■□□□ 1.06
MCF2L-208ENST00000397030 IFFO2Q5TF58 517 aa21.66■■□□□ 1.06
MCF2L-208ENST00000397030 MPHOSPH9Q99550 1183 aa21.66■■□□□ 1.06
MCF2L-208ENST00000397030 KIF16BQ96L93 1317 aa21.65■■□□□ 1.06
MCF2L-208ENST00000397030 SF3B2Q13435 895 aaKnown RBP21.65■■□□□ 1.06
MCF2L-208ENST00000397030 TNIKQ9UKE5 1360 aa21.65■■□□□ 1.06
MCF2L-208ENST00000397030 GBP4Q96PP9 640 aa21.64■■□□□ 1.06
MCF2L-208ENST00000397030 USP35Q9P2H5 1018 aa21.64■■□□□ 1.06
MCF2L-208ENST00000397030 NUTM2GQ5VZR2 741 aa21.63■■□□□ 1.05
MCF2L-208ENST00000397030 SYNE3Q6ZMZ3 975 aa21.63■■□□□ 1.05
MCF2L-208ENST00000397030 RCAN3Q9UKA8 241 aa21.62■■□□□ 1.05
MCF2L-208ENST00000397030 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
MCF2L-208ENST00000397030 FOXD4L6Q3SYB3 417 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-208ENST00000397030 FOXD4L3Q6VB84 417 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-208ENST00000397030 CCDC43Q96MW1 224 aaKnown RBP21.62■■□□□ 1.05
MCF2L-208ENST00000397030 FAM177BA6PVY3 158 aa21.62■■□□□ 1.05
MCF2L-208ENST00000397030 NUTM2BA6NNL0 878 aaPredicted RBP21.61■■□□□ 1.05
MCF2L-208ENST00000397030 NUTM2EB1AL46 878 aaPredicted RBP21.61■■□□□ 1.05
MCF2L-208ENST00000397030 NUTM2AQ8IVF1 878 aaPredicted RBP21.61■■□□□ 1.05
MCF2L-208ENST00000397030 MTMR7Q9Y216 660 aa21.61■■□□□ 1.05
MCF2L-208ENST00000397030 NACADO15069 1562 aa21.61■■□□□ 1.05
MCF2L-208ENST00000397030 PMFBP1Q8TBY8 1022 aa21.6■■□□□ 1.05
MCF2L-208ENST00000397030 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-208ENST00000397030 TPM3P06753 285 aa21.6■■□□□ 1.05
MCF2L-208ENST00000397030 FAM69CQ0P6D2 419 aa21.6■■□□□ 1.05
MCF2L-208ENST00000397030 NEXNQ0ZGT2 675 aa21.6■■□□□ 1.05
MCF2L-208ENST00000397030 SLC4A3P48751 1232 aa21.6■■□□□ 1.05
MCF2L-208ENST00000397030 FAM184AQ8NB25 1140 aa21.59■■□□□ 1.05
MCF2L-208ENST00000397030 C9orf78Q9NZ63 289 aaPredicted RBP21.59■■□□□ 1.05
MCF2L-208ENST00000397030 SYAP1Q96A49 352 aaPredicted RBP21.59■■□□□ 1.05
MCF2L-208ENST00000397030 MCTP1Q6DN14 999 aa21.59■■□□□ 1.05
MCF2L-208ENST00000397030 SETD5Q9C0A6 1442 aa21.58■■□□□ 1.05
MCF2L-208ENST00000397030 PCMTD1Q96MG8 357 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-208ENST00000397030 CCAR1Q8IX12 1150 aaKnown RBP21.57■■□□□ 1.04
MCF2L-208ENST00000397030 CCDC27Q2M243 656 aa21.56■■□□□ 1.04
MCF2L-208ENST00000397030 PIP4K2BP78356 416 aa21.56■■□□□ 1.04
MCF2L-208ENST00000397030 BCL2L13Q9BXK5 485 aa21.56■■□□□ 1.04
MCF2L-208ENST00000397030 PLIN1O60240 522 aa21.55■■□□□ 1.04
MCF2L-208ENST00000397030 CENPJQ9HC77 1338 aaPredicted RBP21.54■■□□□ 1.04
MCF2L-208ENST00000397030 RALBP1Q15311 655 aa21.54■■□□□ 1.04
MCF2L-208ENST00000397030 CSPP1Q1MSJ5 1256 aa21.54■■□□□ 1.04
MCF2L-208ENST00000397030 TPM2P07951 284 aa21.54■■□□□ 1.04
MCF2L-208ENST00000397030 GOLGA6L1Q8N7Z2 621 aa21.54■■□□□ 1.04
MCF2L-208ENST00000397030 OSCARQ8IYS5 282 aa21.53■■□□□ 1.04
MCF2L-208ENST00000397030 FOSBP53539 338 aa21.52■■□□□ 1.04
MCF2L-208ENST00000397030 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.52■■□□□ 1.04
MCF2L-208ENST00000397030 NFXL1Q6ZNB6 911 aa21.52■■□□□ 1.04
MCF2L-208ENST00000397030 IKQ13123 557 aaPredicted RBP21.52■■□□□ 1.04
MCF2L-208ENST00000397030 TCERG1O14776 1098 aaKnown RBP21.51■■□□□ 1.03
MCF2L-208ENST00000397030 KDM4AO75164 1064 aa21.51■■□□□ 1.03
MCF2L-208ENST00000397030 AIMP1Q12904 312 aaKnown RBP21.51■■□□□ 1.03
MCF2L-208ENST00000397030 TSR1Q2NL82 804 aaKnown RBP21.51■■□□□ 1.03
MCF2L-208ENST00000397030 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
MCF2L-208ENST00000397030 MYO15BQ96JP2 1530 aa21.5■■□□□ 1.03
MCF2L-208ENST00000397030 NLRP2Q9NX02 1062 aa21.5■■□□□ 1.03
MCF2L-208ENST00000397030 TRIM29Q14134 588 aa21.5■■□□□ 1.03
MCF2L-208ENST00000397030 STRN4Q9NRL3 753 aa21.5■■□□□ 1.03
MCF2L-208ENST00000397030 KIF3AQ9Y496 699 aa21.49■■□□□ 1.03
MCF2L-208ENST00000397030 TMEM132AQ24JP5 1023 aa21.48■■□□□ 1.03
MCF2L-208ENST00000397030 ANKRD45Q5TZF3 282 aa21.48■■□□□ 1.03
MCF2L-208ENST00000397030 PATL2C9JE40 543 aaKnown RBP21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms