RNA–Protein interactions for RNA: ENST00000396593.6

CARHSP1-202, Transcript of calcium regulated heat stable protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARHSP1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-202ENST00000396593 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
CARHSP1-202ENST00000396593 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
CARHSP1-202ENST00000396593 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
CARHSP1-202ENST00000396593 KIF15Q9NS87 1388 aa17.5■□□□□ 0.39
CARHSP1-202ENST00000396593 PDE4CQ08493 712 aa17.47■□□□□ 0.39
CARHSP1-202ENST00000396593 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
CARHSP1-202ENST00000396593 CLASP1Q7Z460 1538 aa17.46■□□□□ 0.39
CARHSP1-202ENST00000396593 NBPF1Q3BBV0 1214 aa17.44■□□□□ 0.38
CARHSP1-202ENST00000396593 ZBED9Q6R2W3 1325 aa17.43■□□□□ 0.38
CARHSP1-202ENST00000396593 FGD1P98174 961 aa17.42■□□□□ 0.38
CARHSP1-202ENST00000396593 ROCK2O75116 1388 aaKnown RBP17.42■□□□□ 0.38
CARHSP1-202ENST00000396593 RBM10P98175 930 aaKnown RBP17.41■□□□□ 0.38
CARHSP1-202ENST00000396593 PPP4R2Q9NY27 417 aa17.41■□□□□ 0.38
CARHSP1-202ENST00000396593 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
CARHSP1-202ENST00000396593 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
CARHSP1-202ENST00000396593 DHX29Q7Z478 1369 aaKnown RBP17.38■□□□□ 0.37
CARHSP1-202ENST00000396593 AAMPQ13685 434 aa17.38■□□□□ 0.37
CARHSP1-202ENST00000396593 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
CARHSP1-202ENST00000396593 ITSN2Q9NZM3 1697 aa17.37■□□□□ 0.37
CARHSP1-202ENST00000396593 ABCC10Q5T3U5 1492 aa17.35■□□□□ 0.37
CARHSP1-202ENST00000396593 ADGRL2O95490 1459 aa17.35■□□□□ 0.37
CARHSP1-202ENST00000396593 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
CARHSP1-202ENST00000396593 ZBTB47Q9UFB7 747 aaPredicted RBP17.34■□□□□ 0.37
CARHSP1-202ENST00000396593 PDIA4P13667 645 aaKnown RBP17.34■□□□□ 0.37
CARHSP1-202ENST00000396593 BCORL1Q5H9F3 1711 aa17.33■□□□□ 0.37
CARHSP1-202ENST00000396593 PNISRQ8TF01 805 aaKnown RBP17.33■□□□□ 0.37
CARHSP1-202ENST00000396593 IPO9Q96P70 1041 aaKnown RBP17.33■□□□□ 0.37
CARHSP1-202ENST00000396593 CCDC144AA2RUR9 1427 aa17.32■□□□□ 0.36
CARHSP1-202ENST00000396593 NEFMP07197 916 aa17.32■□□□□ 0.36
CARHSP1-202ENST00000396593 ABCA8O94911 1581 aa17.32■□□□□ 0.36
CARHSP1-202ENST00000396593 CDC42BPAQ5VT25 1732 aa17.32■□□□□ 0.36
CARHSP1-202ENST00000396593 ARHGAP5Q13017 1502 aa17.3■□□□□ 0.36
CARHSP1-202ENST00000396593 MBD5Q9P267 1494 aa17.3■□□□□ 0.36
CARHSP1-202ENST00000396593 ANP32AP39687 249 aaKnown RBP17.3■□□□□ 0.36
CARHSP1-202ENST00000396593 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
CARHSP1-202ENST00000396593 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
CARHSP1-202ENST00000396593 ADGBQ8N7X0 1667 aa17.3■□□□□ 0.36
CARHSP1-202ENST00000396593 AEBP2Q6ZN18 517 aaPredicted RBP17.29■□□□□ 0.36
CARHSP1-202ENST00000396593 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
CARHSP1-202ENST00000396593 CCDC141Q6ZP82 1450 aa17.28■□□□□ 0.36
CARHSP1-202ENST00000396593 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.35
CARHSP1-202ENST00000396593 SYCP2Q9BX26 1530 aa17.26■□□□□ 0.35
CARHSP1-202ENST00000396593 PANK3Q9H999 370 aa17.25■□□□□ 0.35
CARHSP1-202ENST00000396593 ADCY10Q96PN6 1610 aa17.25■□□□□ 0.35
CARHSP1-202ENST00000396593 RALGAPBQ86X10 1494 aa17.24■□□□□ 0.35
CARHSP1-202ENST00000396593 RSPH4AQ5TD94 716 aa17.24■□□□□ 0.35
CARHSP1-202ENST00000396593 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
CARHSP1-202ENST00000396593 FAM135AQ9P2D6 1515 aa17.24■□□□□ 0.35
CARHSP1-202ENST00000396593 CROCC2H7BZ55 1655 aa17.24■□□□□ 0.35
CARHSP1-202ENST00000396593 KDM5CP41229 1560 aa17.23■□□□□ 0.35
CARHSP1-202ENST00000396593 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
CARHSP1-202ENST00000396593 USP35Q9P2H5 1018 aa17.23■□□□□ 0.35
CARHSP1-202ENST00000396593 LAS1LQ9Y4W2 734 aaKnown RBP17.23■□□□□ 0.35
CARHSP1-202ENST00000396593 EFCAB2Q5VUJ9 269 aa17.22■□□□□ 0.35
CARHSP1-202ENST00000396593 SENP3Q9H4L4 574 aaPredicted RBP17.22■□□□□ 0.35
CARHSP1-202ENST00000396593 SAMD9LQ8IVG5 1584 aa17.22■□□□□ 0.35
CARHSP1-202ENST00000396593 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
CARHSP1-202ENST00000396593 SHANK2Q9UPX8 1470 aa17.21■□□□□ 0.35
CARHSP1-202ENST00000396593 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
CARHSP1-202ENST00000396593 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
CARHSP1-202ENST00000396593 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
CARHSP1-202ENST00000396593 ARID4BQ4LE39 1312 aaPredicted RBP17.21■□□□□ 0.35
CARHSP1-202ENST00000396593 UHRF1BP1Q6BDS2 1440 aa17.21■□□□□ 0.35
CARHSP1-202ENST00000396593 RALBP1Q15311 655 aa17.21■□□□□ 0.34
CARHSP1-202ENST00000396593 FAM43AQ8N2R8 423 aa17.21■□□□□ 0.34
CARHSP1-202ENST00000396593 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
CARHSP1-202ENST00000396593 KTN1Q86UP2 1357 aaKnown RBP17.19■□□□□ 0.34
CARHSP1-202ENST00000396593 DISP3Q9P2K9 1392 aa17.19■□□□□ 0.34
CARHSP1-202ENST00000396593 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
CARHSP1-202ENST00000396593 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
CARHSP1-202ENST00000396593 PLIN1O60240 522 aa17.18■□□□□ 0.34
CARHSP1-202ENST00000396593 TTC37Q6PGP7 1564 aa17.17■□□□□ 0.34
CARHSP1-202ENST00000396593 SPAG9O60271 1321 aaKnown RBP17.17■□□□□ 0.34
CARHSP1-202ENST00000396593 PLA2R1Q13018 1463 aa17.17■□□□□ 0.34
CARHSP1-202ENST00000396593 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
CARHSP1-202ENST00000396593 TMF1P82094 1093 aa17.16■□□□□ 0.34
CARHSP1-202ENST00000396593 GSE1Q14687 1217 aa17.16■□□□□ 0.34
CARHSP1-202ENST00000396593 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
CARHSP1-202ENST00000396593 CHGAP10645 457 aaKnown RBP17.15■□□□□ 0.34
CARHSP1-202ENST00000396593 TESK2Q96S53 571 aa17.15■□□□□ 0.34
CARHSP1-202ENST00000396593 CDC42BPBQ9Y5S2 1711 aa17.15■□□□□ 0.34
CARHSP1-202ENST00000396593 KIF3BO15066 747 aa17.15■□□□□ 0.34
CARHSP1-202ENST00000396593 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.14■□□□□ 0.33
CARHSP1-202ENST00000396593 PER1O15534 1290 aaPredicted RBP17.14■□□□□ 0.33
CARHSP1-202ENST00000396593 A2MP01023 1474 aa17.13■□□□□ 0.33
CARHSP1-202ENST00000396593 RCAN3Q9UKA8 241 aa17.13■□□□□ 0.33
CARHSP1-202ENST00000396593 ARHGEF12Q9NZN5 1544 aa17.13■□□□□ 0.33
CARHSP1-202ENST00000396593 TRAPPC8Q9Y2L5 1435 aa17.13■□□□□ 0.33
CARHSP1-202ENST00000396593 BRD4O60885 1362 aaPredicted RBP17.13■□□□□ 0.33
CARHSP1-202ENST00000396593 NPM2Q86SE8 214 aaKnown RBP17.13■□□□□ 0.33
CARHSP1-202ENST00000396593 RRP9O43818 475 aaKnown RBP17.12■□□□□ 0.33
CARHSP1-202ENST00000396593 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
CARHSP1-202ENST00000396593 ARHGEF5Q12774 1597 aa17.1■□□□□ 0.33
CARHSP1-202ENST00000396593 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
CARHSP1-202ENST00000396593 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
CARHSP1-202ENST00000396593 PREX2Q70Z35 1606 aa17.08■□□□□ 0.33
CARHSP1-202ENST00000396593 KDM5DQ9BY66 1539 aa17.08■□□□□ 0.33
CARHSP1-202ENST00000396593 POLR1AO95602 1720 aaPredicted RBP17.08■□□□□ 0.32
CARHSP1-202ENST00000396593 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
CARHSP1-202ENST00000396593 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms