RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ZFYVE16Q7Z3T8 1539 aa21.53■■□□□ 1.04
CPSF7-202ENST00000394888 ARAP3Q8WWN8 1544 aa21.53■■□□□ 1.04
CPSF7-202ENST00000394888 INO80Q9ULG1 1556 aaPredicted RBP21.51■■□□□ 1.03
CPSF7-202ENST00000394888 PRAG1Q86YV5 1406 aa21.51■■□□□ 1.03
CPSF7-202ENST00000394888 PRDM15P57071 1507 aaPredicted RBP21.51■■□□□ 1.03
CPSF7-202ENST00000394888 TRAPPC8Q9Y2L5 1435 aa21.5■■□□□ 1.03
CPSF7-202ENST00000394888 CEP152O94986 1710 aa21.49■■□□□ 1.03
CPSF7-202ENST00000394888 ERBINQ96RT1 1412 aa21.49■■□□□ 1.03
CPSF7-202ENST00000394888 MROH1Q8NDA8 1641 aa21.48■■□□□ 1.03
CPSF7-202ENST00000394888 VWDEQ8N2E2 1590 aa21.47■■□□□ 1.03
CPSF7-202ENST00000394888 TSHZ2Q9NRE2 1034 aa21.46■■□□□ 1.03
CPSF7-202ENST00000394888 TSPY4P0CV99 314 aa21.45■■□□□ 1.03
CPSF7-202ENST00000394888 TSPY10P0CW01 314 aa21.45■■□□□ 1.03
CPSF7-202ENST00000394888 SPHKAPQ2M3C7 1700 aa21.45■■□□□ 1.02
CPSF7-202ENST00000394888 RSPH4AQ5TD94 716 aa21.44■■□□□ 1.02
CPSF7-202ENST00000394888 MADDQ8WXG6 1647 aa21.44■■□□□ 1.02
CPSF7-202ENST00000394888 GPRASP1Q5JY77 1395 aa21.44■■□□□ 1.02
CPSF7-202ENST00000394888 FKBP8Q14318 412 aa21.43■■□□□ 1.02
CPSF7-202ENST00000394888 IQGAP1P46940 1657 aa21.43■■□□□ 1.02
CPSF7-202ENST00000394888 CLTCL1P53675 1640 aa21.4■■□□□ 1.02
CPSF7-202ENST00000394888 ARID4BQ4LE39 1312 aaPredicted RBP21.4■■□□□ 1.02
CPSF7-202ENST00000394888 EIF2AK4Q9P2K8 1649 aaKnown RBP21.38■■□□□ 1.01
CPSF7-202ENST00000394888 IFT172Q9UG01 1749 aa21.38■■□□□ 1.01
CPSF7-202ENST00000394888 TET3O43151 1660 aa21.38■■□□□ 1.01
CPSF7-202ENST00000394888 TRPM2O94759 1503 aa21.37■■□□□ 1.01
CPSF7-202ENST00000394888 HNRNPUQ00839 825 aaKnown RBP eCLIP21.36■■□□□ 1.01
CPSF7-202ENST00000394888 WDR7Q9Y4E6 1490 aa21.36■■□□□ 1.01
CPSF7-202ENST00000394888 KIDINS220Q9ULH0 1771 aa21.36■■□□□ 1.01
CPSF7-202ENST00000394888 CCDC144AA2RUR9 1427 aa21.35■■□□□ 1.01
CPSF7-202ENST00000394888 RTEL1-TNFRSF6BF6WH68 1400 aa21.34■■□□□ 1.01
CPSF7-202ENST00000394888 BCANQ96GW7 911 aa21.34■■□□□ 1.01
CPSF7-202ENST00000394888 COL17A1Q9UMD9 1497 aaPredicted RBP21.33■■□□□ 1.01
CPSF7-202ENST00000394888 MYOM1P52179 1685 aa21.33■■□□□ 1
CPSF7-202ENST00000394888 ATP7AQ04656 1500 aa21.32■■□□□ 1
CPSF7-202ENST00000394888 DCAF11Q8TEB1 546 aa21.32■■□□□ 1
CPSF7-202ENST00000394888 PTPRTO14522 1441 aa21.32■■□□□ 1
CPSF7-202ENST00000394888 ST20-MTHFSA0A0A6YYL1 179 aa21.31■■□□□ 1
CPSF7-202ENST00000394888 ZNF326Q5BKZ1 582 aaKnown RBP21.31■■□□□ 1
CPSF7-202ENST00000394888 ZBED9Q6R2W3 1325 aa21.3■■□□□ 1
CPSF7-202ENST00000394888 MROH2AA6NES4 1674 aa21.3■■□□□ 1
CPSF7-202ENST00000394888 NBPF1Q3BBV0 1214 aa21.3■■□□□ 1
CPSF7-202ENST00000394888 NEURL4Q96JN8 1562 aa21.29■■□□□ 1
CPSF7-202ENST00000394888 CARD11Q9BXL7 1154 aa21.28■■□□□ 1
CPSF7-202ENST00000394888 LRPPRCP42704 1394 aaKnown RBP21.28■■□□□ 1
CPSF7-202ENST00000394888 TESK2Q96S53 571 aa21.27■■□□□ 1
CPSF7-202ENST00000394888 KIAA1210Q9ULL0 1709 aa21.27■□□□□ 0.99
CPSF7-202ENST00000394888 ROCK2O75116 1388 aaKnown RBP21.26■□□□□ 0.99
CPSF7-202ENST00000394888 MRS2Q9HD23 443 aa21.26■□□□□ 0.99
CPSF7-202ENST00000394888 KDM2AQ9Y2K7 1162 aa21.26■□□□□ 0.99
CPSF7-202ENST00000394888 DISP3Q9P2K9 1392 aa21.26■□□□□ 0.99
CPSF7-202ENST00000394888 PPRC1Q5VV67 1664 aaKnown RBP21.25■□□□□ 0.99
CPSF7-202ENST00000394888 FANCAO15360 1455 aa21.24■□□□□ 0.99
CPSF7-202ENST00000394888 FRMPD1Q5SYB0 1578 aa21.23■□□□□ 0.99
CPSF7-202ENST00000394888 PER1O15534 1290 aaPredicted RBP21.23■□□□□ 0.99
CPSF7-202ENST00000394888 FAM9BQ8IZU0 186 aa21.22■□□□□ 0.99
CPSF7-202ENST00000394888 UGGT1Q9NYU2 1555 aa21.21■□□□□ 0.99
CPSF7-202ENST00000394888 PARD3Q8TEW0 1356 aa21.21■□□□□ 0.99
CPSF7-202ENST00000394888 PNISRQ8TF01 805 aaKnown RBP21.21■□□□□ 0.99
CPSF7-202ENST00000394888 EFCAB2Q5VUJ9 269 aa21.2■□□□□ 0.99
CPSF7-202ENST00000394888 AFAP1Q8N556 730 aa21.2■□□□□ 0.99
CPSF7-202ENST00000394888 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
CPSF7-202ENST00000394888 SMG6Q86US8 1419 aaKnown RBP21.19■□□□□ 0.98
CPSF7-202ENST00000394888 EFCAB6Q5THR3 1501 aa21.19■□□□□ 0.98
CPSF7-202ENST00000394888 ASXL2Q76L83 1435 aa21.19■□□□□ 0.98
CPSF7-202ENST00000394888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.982e-8■□□□□ 11
CPSF7-202ENST00000394888 RNF123Q5XPI4 1314 aa21.16■□□□□ 0.98
CPSF7-202ENST00000394888 MAP3K4Q9Y6R4 1608 aa21.15■□□□□ 0.98
CPSF7-202ENST00000394888 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
CPSF7-202ENST00000394888 KIF1BO60333 1816 aa21.15■□□□□ 0.98
CPSF7-202ENST00000394888 IRX6P78412 446 aaPredicted RBP21.15■□□□□ 0.98
CPSF7-202ENST00000394888 ADGRL1O94910 1474 aa21.15■□□□□ 0.98
CPSF7-202ENST00000394888 LMTK2Q8IWU2 1503 aa21.15■□□□□ 0.98
CPSF7-202ENST00000394888 ZC3H13Q5T200 1668 aaKnown RBP21.14■□□□□ 0.97
CPSF7-202ENST00000394888 MYO3AQ8NEV4 1616 aa21.13■□□□□ 0.97
CPSF7-202ENST00000394888 RGL3Q3MIN7 710 aa21.13■□□□□ 0.97
CPSF7-202ENST00000394888 SCAPERQ9BY12 1400 aa21.12■□□□□ 0.97
CPSF7-202ENST00000394888 KTN1Q86UP2 1357 aaKnown RBP21.12■□□□□ 0.97
CPSF7-202ENST00000394888 NRXN1Q9ULB1 1477 aa21.11■□□□□ 0.97
CPSF7-202ENST00000394888 SPAG9O60271 1321 aaKnown RBP21.11■□□□□ 0.97
CPSF7-202ENST00000394888 BRD4O60885 1362 aaPredicted RBP21.11■□□□□ 0.97
CPSF7-202ENST00000394888 PPLO60437 1756 aa21.11■□□□□ 0.97
CPSF7-202ENST00000394888 SYNMO15061 1565 aa21.1■□□□□ 0.97
CPSF7-202ENST00000394888 MYBBP1AQ9BQG0 1328 aaKnown RBP21.07■□□□□ 0.96
CPSF7-202ENST00000394888 ADGRB3O60242 1522 aa21.07■□□□□ 0.96
CPSF7-202ENST00000394888 MYOM2P54296 1465 aa21.07■□□□□ 0.96
CPSF7-202ENST00000394888 ZMYM4Q5VZL5 1548 aa21.06■□□□□ 0.96
CPSF7-202ENST00000394888 CFAP74Q9C0B2 1584 aa21.06■□□□□ 0.96
CPSF7-202ENST00000394888 HECW2Q9P2P5 1572 aa21.06■□□□□ 0.96
CPSF7-202ENST00000394888 NEFLP07196 543 aa21.04■□□□□ 0.96
CPSF7-202ENST00000394888 RICTORQ6R327 1708 aa21.04■□□□□ 0.96
CPSF7-202ENST00000394888 PIK3C2BO00750 1634 aa21.03■□□□□ 0.96
CPSF7-202ENST00000394888 POLR3GLQ9BT43 218 aa21.03■□□□□ 0.96
CPSF7-202ENST00000394888 BLMP54132 1417 aaPredicted RBP21.03■□□□□ 0.96
CPSF7-202ENST00000394888 KDM5AP29375 1690 aaKnown RBP21.02■□□□□ 0.95
CPSF7-202ENST00000394888 ZNF518AQ6AHZ1 1483 aa21.01■□□□□ 0.95
CPSF7-202ENST00000394888 SCAF11Q99590 1463 aaKnown RBP21.01■□□□□ 0.95
CPSF7-202ENST00000394888 POGZQ7Z3K3 1410 aa21.01■□□□□ 0.95
CPSF7-202ENST00000394888 ERICH6BQ5W0A0 696 aa21.01■□□□□ 0.95
CPSF7-202ENST00000394888 RALBP1Q15311 655 aa21■□□□□ 0.95
CPSF7-202ENST00000394888 CAMSAP1Q5T5Y3 1602 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms