RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 ZFYVE16Q7Z3T8 1539 aa28.54■■■□□ 2.16
PRKCD-202ENST00000394729 CARD11Q9BXL7 1154 aa28.52■■■□□ 2.16
PRKCD-202ENST00000394729 MAST1Q9Y2H9 1570 aa28.52■■■□□ 2.16
PRKCD-202ENST00000394729 ATP7AQ04656 1500 aa28.51■■■□□ 2.15
PRKCD-202ENST00000394729 PLXNC1O60486 1568 aa28.5■■■□□ 2.15
PRKCD-202ENST00000394729 SCAF1Q9H7N4 1312 aaKnown RBP28.49■■■□□ 2.15
PRKCD-202ENST00000394729 ERBINQ96RT1 1412 aa28.49■■■□□ 2.15
PRKCD-202ENST00000394729 PLA2R1Q13018 1463 aa28.48■■■□□ 2.15
PRKCD-202ENST00000394729 ANP32CO43423 234 aa28.47■■■□□ 2.15
PRKCD-202ENST00000394729 NBPF1Q3BBV0 1214 aa28.47■■■□□ 2.15
PRKCD-202ENST00000394729 CHGAP10645 457 aaKnown RBP28.46■■■□□ 2.15
PRKCD-202ENST00000394729 KDM5DQ9BY66 1539 aa28.45■■■□□ 2.15
PRKCD-202ENST00000394729 ARAP3Q8WWN8 1544 aa28.43■■■□□ 2.14
PRKCD-202ENST00000394729 USP47Q96K76 1375 aa28.42■■■□□ 2.14
PRKCD-202ENST00000394729 RTEL1-TNFRSF6BF6WH68 1400 aa28.41■■■□□ 2.14
PRKCD-202ENST00000394729 ZNF518AQ6AHZ1 1483 aa28.4■■■□□ 2.14
PRKCD-202ENST00000394729 DHX29Q7Z478 1369 aaKnown RBP28.4■■■□□ 2.14
PRKCD-202ENST00000394729 UNC13BO14795 1591 aa28.39■■■□□ 2.14
PRKCD-202ENST00000394729 ST20-MTHFSA0A0A6YYL1 179 aa28.39■■■□□ 2.14
PRKCD-202ENST00000394729 TSPOAP1O95153 1857 aa28.38■■■□□ 2.13
PRKCD-202ENST00000394729 CFAP65Q6ZU64 1925 aaKnown RBP28.38■■■□□ 2.13
PRKCD-202ENST00000394729 KANK1Q14678 1352 aa28.37■■■□□ 2.13
PRKCD-202ENST00000394729 ROCK2O75116 1388 aaKnown RBP28.37■■■□□ 2.13
PRKCD-202ENST00000394729 KIF7Q2M1P5 1343 aa28.36■■■□□ 2.13
PRKCD-202ENST00000394729 GTF3C3Q9Y5Q9 886 aa28.35■■■□□ 2.13
PRKCD-202ENST00000394729 POGZQ7Z3K3 1410 aa28.35■■■□□ 2.13
PRKCD-202ENST00000394729 INO80Q9ULG1 1556 aaPredicted RBP28.33■■■□□ 2.13
PRKCD-202ENST00000394729 WASHC2CQ9Y4E1 1318 aa28.33■■■□□ 2.13
PRKCD-202ENST00000394729 KIDINS220Q9ULH0 1771 aa28.33■■■□□ 2.13
PRKCD-202ENST00000394729 IQGAP3Q86VI3 1631 aa28.33■■■□□ 2.13
PRKCD-202ENST00000394729 MLECQ14165 292 aa28.32■■■□□ 2.12
PRKCD-202ENST00000394729 NUTM2DQ5VT03 806 aaPredicted RBP28.32■■■□□ 2.12
PRKCD-202ENST00000394729 CCDC7Q96M83 1385 aa28.3■■■□□ 2.12
PRKCD-202ENST00000394729 A2MP01023 1474 aa28.3■■■□□ 2.12
PRKCD-202ENST00000394729 UGGT1Q9NYU2 1555 aa28.29■■■□□ 2.12
PRKCD-202ENST00000394729 YEATS2Q9ULM3 1422 aa28.28■■■□□ 2.12
PRKCD-202ENST00000394729 MAGI2Q86UL8 1455 aa28.25■■■□□ 2.11
PRKCD-202ENST00000394729 SPATA31E1Q6ZUB1 1445 aa28.25■■■□□ 2.11
PRKCD-202ENST00000394729 E9PCH4 1651 aa28.25■■■□□ 2.11
PRKCD-202ENST00000394729 ATP10AO60312 1499 aa28.24■■■□□ 2.11
PRKCD-202ENST00000394729 SENP3-EIF4A1A0A087X0R7 540 aa28.24■■■□□ 2.11
PRKCD-202ENST00000394729 CCDC184Q52MB2 194 aa28.21■■■□□ 2.11
PRKCD-202ENST00000394729 PRAG1Q86YV5 1406 aa28.19■■■□□ 2.1
PRKCD-202ENST00000394729 HECW2Q9P2P5 1572 aa28.16■■■□□ 2.1
PRKCD-202ENST00000394729 RALGAPBQ86X10 1494 aa28.15■■■□□ 2.1
PRKCD-202ENST00000394729 UHRF1BP1Q6BDS2 1440 aa28.15■■■□□ 2.1
PRKCD-202ENST00000394729 ABCA6Q8N139 1617 aa28.15■■■□□ 2.1
PRKCD-202ENST00000394729 NEO1Q92859 1461 aa28.15■■■□□ 2.1
PRKCD-202ENST00000394729 FRMPD1Q5SYB0 1578 aa28.13■■■□□ 2.09
PRKCD-202ENST00000394729 MLH3Q9UHC1 1453 aa28.13■■■□□ 2.09
PRKCD-202ENST00000394729 BCORL1Q5H9F3 1711 aa28.13■■■□□ 2.09
PRKCD-202ENST00000394729 PLPPR3Q6T4P5 718 aa28.13■■■□□ 2.09
PRKCD-202ENST00000394729 MROH1Q8NDA8 1641 aa28.12■■■□□ 2.09
PRKCD-202ENST00000394729 KDM5CP41229 1560 aa28.12■■■□□ 2.09
PRKCD-202ENST00000394729 CNTLNQ9NXG0 1405 aa28.12■■■□□ 2.09
PRKCD-202ENST00000394729 CFAP74Q9C0B2 1584 aa28.11■■■□□ 2.09
PRKCD-202ENST00000394729 CFAP70Q5T0N1 1121 aa28.11■■■□□ 2.09
PRKCD-202ENST00000394729 CEP152O94986 1710 aa28.1■■■□□ 2.09
PRKCD-202ENST00000394729 DIP2BQ9P265 1576 aa28.1■■■□□ 2.09
PRKCD-202ENST00000394729 ADGRF5Q8IZF2 1346 aa28.1■■■□□ 2.09
PRKCD-202ENST00000394729 CLTCL1P53675 1640 aa28.1■■■□□ 2.09
PRKCD-202ENST00000394729 FAM9BQ8IZU0 186 aa28.1■■■□□ 2.09
PRKCD-202ENST00000394729 MAP3K4Q9Y6R4 1608 aa28.09■■■□□ 2.09
PRKCD-202ENST00000394729 PRDM15P57071 1507 aaPredicted RBP28.09■■■□□ 2.09
PRKCD-202ENST00000394729 FBXO31Q5XUX0 539 aaPredicted RBP28.08■■■□□ 2.09
PRKCD-202ENST00000394729 DEPDC5O75140 1603 aa28.07■■■□□ 2.08
PRKCD-202ENST00000394729 TRHP20396 242 aaPredicted RBP28.07■■■□□ 2.08
PRKCD-202ENST00000394729 NPATQ14207 1427 aa28.07■■■□□ 2.08
PRKCD-202ENST00000394729 PRKRIP1Q9H875 184 aaPredicted RBP28.05■■■□□ 2.08
PRKCD-202ENST00000394729 TET3O43151 1660 aa28.05■■■□□ 2.08
PRKCD-202ENST00000394729 SPHKAPQ2M3C7 1700 aa28.04■■■□□ 2.08
PRKCD-202ENST00000394729 PPRC1Q5VV67 1664 aaKnown RBP28.04■■■□□ 2.08
PRKCD-202ENST00000394729 TRPM2O94759 1503 aa28.03■■■□□ 2.08
PRKCD-202ENST00000394729 MRS2Q9HD23 443 aa28.03■■■□□ 2.08
PRKCD-202ENST00000394729 PTPRTO14522 1441 aa28.03■■■□□ 2.08
PRKCD-202ENST00000394729 ARID4BQ4LE39 1312 aaPredicted RBP28.02■■■□□ 2.08
PRKCD-202ENST00000394729 DIP2CQ9Y2E4 1556 aa28.01■■■□□ 2.07
PRKCD-202ENST00000394729 CCER2I3L3R5 266 aa28■■■□□ 2.07
PRKCD-202ENST00000394729 TMEM132EQ6IEE7 984 aa28■■■□□ 2.07
PRKCD-202ENST00000394729 COL17A1Q9UMD9 1497 aaPredicted RBP28■■■□□ 2.07
PRKCD-202ENST00000394729 RICTORQ6R327 1708 aa27.99■■■□□ 2.07
PRKCD-202ENST00000394729 EFCAB6Q5THR3 1501 aa27.99■■■□□ 2.07
PRKCD-202ENST00000394729 VWDEQ8N2E2 1590 aa27.99■■■□□ 2.07
PRKCD-202ENST00000394729 HNRNPUQ00839 825 aaKnown RBP eCLIP27.99■■■□□ 2.07
PRKCD-202ENST00000394729 DISP3Q9P2K9 1392 aa27.97■■■□□ 2.07
PRKCD-202ENST00000394729 TRPM1Q7Z4N2 1603 aa27.97■■■□□ 2.07
PRKCD-202ENST00000394729 EIF2AK4Q9P2K8 1649 aaKnown RBP27.97■■■□□ 2.07
PRKCD-202ENST00000394729 IDI1Q13907 227 aa27.96■■■□□ 2.07
PRKCD-202ENST00000394729 TESK2Q96S53 571 aa27.94■■■□□ 2.06
PRKCD-202ENST00000394729 TRAK1Q9UPV9 953 aa27.93■■■□□ 2.06
PRKCD-202ENST00000394729 NOS1P29475 1434 aa27.93■■■□□ 2.06
PRKCD-202ENST00000394729 GLI2P10070 1586 aa27.92■■■□□ 2.06
PRKCD-202ENST00000394729 ABCC3O15438 1527 aa27.92■■■□□ 2.06
PRKCD-202ENST00000394729 SAFB2Q14151 953 aaKnown RBP eCLIP27.92■■■□□ 2.06
PRKCD-202ENST00000394729 CC2D1BQ5T0F9 858 aaKnown RBP27.92■■■□□ 2.06
PRKCD-202ENST00000394729 STAG3Q9UJ98 1225 aa27.92■■■□□ 2.06
PRKCD-202ENST00000394729 RNF17Q9BXT8 1623 aaKnown RBP27.9■■■□□ 2.06
PRKCD-202ENST00000394729 TMF1P82094 1093 aa27.87■■■□□ 2.05
PRKCD-202ENST00000394729 PANK3Q9H999 370 aa27.86■■■□□ 2.05
PRKCD-202ENST00000394729 STK26Q9P289 416 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms