RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 VGFO15240 615 aaPredicted RBP8.57□□□□□ -1.04
CASC3-202ENST00000394114 CDC42BPAQ5VT25 1732 aa8.56□□□□□ -1.04
CASC3-202ENST00000394114 ITSN2Q9NZM3 1697 aa8.56□□□□□ -1.04
CASC3-202ENST00000394114 CYB5RLQ6IPT4 315 aa8.56□□□□□ -1.04
CASC3-202ENST00000394114 ZCCHC11Q5TAX3 1644 aaKnown RBP8.55□□□□□ -1.04
CASC3-202ENST00000394114 ZMYND10O75800 440 aa8.55□□□□□ -1.04
CASC3-202ENST00000394114 CAMSAP2Q08AD1 1489 aa8.55□□□□□ -1.04
CASC3-202ENST00000394114 SSUH2Q9Y2M2 353 aa8.55□□□□□ -1.04
CASC3-202ENST00000394114 ABCC10Q5T3U5 1492 aa8.54□□□□□ -1.04
CASC3-202ENST00000394114 ZBTB7CA1YPR0 619 aa8.54□□□□□ -1.04
CASC3-202ENST00000394114 HFM1A2PYH4 1435 aa8.54□□□□□ -1.04
CASC3-202ENST00000394114 NAIPQ13075 1403 aa8.54□□□□□ -1.04
CASC3-202ENST00000394114 CADPS2Q86UW7 1296 aa8.54□□□□□ -1.04
CASC3-202ENST00000394114 SGIP1Q9BQI5 828 aa8.54□□□□□ -1.04
CASC3-202ENST00000394114 DAPK1P53355 1430 aa8.53□□□□□ -1.04
CASC3-202ENST00000394114 TTC37Q6PGP7 1564 aa8.53□□□□□ -1.04
CASC3-202ENST00000394114 ABCC5O15440 1437 aa8.53□□□□□ -1.04
CASC3-202ENST00000394114 SPINK5Q9NQ38 1064 aaPredicted RBP8.52□□□□□ -1.05
CASC3-202ENST00000394114 DNMT1P26358 1616 aaKnown RBP8.52□□□□□ -1.05
CASC3-202ENST00000394114 KDM6BO15054 1643 aa8.52□□□□□ -1.05
CASC3-202ENST00000394114 MAPKBP1O60336 1514 aa8.52□□□□□ -1.05
CASC3-202ENST00000394114 ARHGEF1Q92888 912 aaKnown RBP8.51□□□□□ -1.05
CASC3-202ENST00000394114 KDM5BQ9UGL1 1544 aa8.51□□□□□ -1.05
CASC3-202ENST00000394114 UHRF1BP1LA0JNW5 1464 aa8.51□□□□□ -1.05
CASC3-202ENST00000394114 CDC42BPBQ9Y5S2 1711 aa8.51□□□□□ -1.05
CASC3-202ENST00000394114 HNRNPMP52272 730 aaKnown RBP eCLIP8.51□□□□□ -1.05
CASC3-202ENST00000394114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.51□□□□□ -1.05
CASC3-202ENST00000394114 TESPA1A2RU30 521 aaPredicted RBP8.5□□□□□ -1.05
CASC3-202ENST00000394114 PDIA4P13667 645 aaKnown RBP8.5□□□□□ -1.05
CASC3-202ENST00000394114 NEUROD1Q13562 356 aa8.5□□□□□ -1.05
CASC3-202ENST00000394114 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
CASC3-202ENST00000394114 BCL11BQ9C0K0 894 aaPredicted RBP8.5□□□□□ -1.05
CASC3-202ENST00000394114 SIN3AQ96ST3 1273 aa8.5□□□□□ -1.05
CASC3-202ENST00000394114 GCC2Q8IWJ2 1684 aa8.5□□□□□ -1.05
CASC3-202ENST00000394114 STK24Q9Y6E0 443 aa8.5□□□□□ -1.05
CASC3-202ENST00000394114 PREX2Q70Z35 1606 aa8.49□□□□□ -1.05
CASC3-202ENST00000394114 ARHGAP5Q13017 1502 aa8.49□□□□□ -1.05
CASC3-202ENST00000394114 CLSPNQ9HAW4 1339 aa8.49□□□□□ -1.05
CASC3-202ENST00000394114 MYO5CQ9NQX4 1742 aa8.48□□□□□ -1.05
CASC3-202ENST00000394114 NUBP1P53384 320 aa8.48□□□□□ -1.05
CASC3-202ENST00000394114 NECTIN2Q92692 538 aa8.48□□□□□ -1.05
CASC3-202ENST00000394114 SAMD9LQ8IVG5 1584 aa8.48□□□□□ -1.05
CASC3-202ENST00000394114 AKNAQ7Z591 1439 aa8.48□□□□□ -1.05
CASC3-202ENST00000394114 SPDYE2BA6NHP3 402 aa8.47□□□□□ -1.05
CASC3-202ENST00000394114 SPDYE6P0CI01 402 aa8.47□□□□□ -1.05
CASC3-202ENST00000394114 SPDYE2Q495Y8 402 aa8.47□□□□□ -1.05
CASC3-202ENST00000394114 CROCC2H7BZ55 1655 aa8.47□□□□□ -1.05
CASC3-202ENST00000394114 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.46□□□□□ -1.05
CASC3-202ENST00000394114 SEMA3EO15041 775 aa8.46□□□□□ -1.05
CASC3-202ENST00000394114 ZFP91Q96JP5 570 aaPredicted RBP8.46□□□□□ -1.05
CASC3-202ENST00000394114 ADGBQ8N7X0 1667 aa8.46□□□□□ -1.06
CASC3-202ENST00000394114 WDR7Q9Y4E6 1490 aa8.46□□□□□ -1.06
CASC3-202ENST00000394114 SYCP2Q9BX26 1530 aa8.46□□□□□ -1.06
CASC3-202ENST00000394114 TSPY4P0CV99 314 aa8.46□□□□□ -1.06
CASC3-202ENST00000394114 TSPY10P0CW01 314 aa8.46□□□□□ -1.06
CASC3-202ENST00000394114 GPBP1L1Q9HC44 474 aaPredicted RBP8.46□□□□□ -1.06
CASC3-202ENST00000394114 NCOA1Q15788 1441 aa8.46□□□□□ -1.06
CASC3-202ENST00000394114 IL27Q8NEV9 243 aa8.45□□□□□ -1.06
CASC3-202ENST00000394114 ROCK1Q13464 1354 aa8.45□□□□□ -1.06
CASC3-202ENST00000394114 C9orf84Q5VXU9 1444 aa8.45□□□□□ -1.06
CASC3-202ENST00000394114 ASXL2Q76L83 1435 aa8.45□□□□□ -1.06
CASC3-202ENST00000394114 BARGINQ6ZT62 677 aa8.45□□□□□ -1.06
CASC3-202ENST00000394114 ILDR1Q86SU0 546 aaPredicted RBP8.44□□□□□ -1.06
CASC3-202ENST00000394114 APBB1O00213 710 aa8.44□□□□□ -1.06
CASC3-202ENST00000394114 ANKRD30AQ9BXX3 1397 aa8.44□□□□□ -1.06
CASC3-202ENST00000394114 MBD5Q9P267 1494 aa8.44□□□□□ -1.06
CASC3-202ENST00000394114 PLCH2O75038 1416 aa8.43□□□□□ -1.06
CASC3-202ENST00000394114 CCDC141Q6ZP82 1450 aa8.43□□□□□ -1.06
CASC3-202ENST00000394114 CHRM1P11229 460 aaPredicted RBP8.43□□□□□ -1.06
CASC3-202ENST00000394114 DCAF8Q5TAQ9 597 aa8.43□□□□□ -1.06
CASC3-202ENST00000394114 EFCAB2Q5VUJ9 269 aa8.43□□□□□ -1.06
CASC3-202ENST00000394114 MPHOSPH9Q99550 1183 aa8.42□□□□□ -1.06
CASC3-202ENST00000394114 ARHGEF5Q12774 1597 aa8.42□□□□□ -1.06
CASC3-202ENST00000394114 ARHGEF12Q9NZN5 1544 aa8.42□□□□□ -1.06
CASC3-202ENST00000394114 MKRN3Q13064 507 aaKnown RBP8.42□□□□□ -1.06
CASC3-202ENST00000394114 DENND4BO75064 1496 aaPredicted RBP8.42□□□□□ -1.06
CASC3-202ENST00000394114 ADGRL2O95490 1459 aa8.42□□□□□ -1.06
CASC3-202ENST00000394114 ANKRD50Q9ULJ7 1429 aa8.42□□□□□ -1.06
CASC3-202ENST00000394114 KIF15Q9NS87 1388 aa8.41□□□□□ -1.06
CASC3-202ENST00000394114 RIMBP3CA6NJZ7 1639 aa8.41□□□□□ -1.06
CASC3-202ENST00000394114 RIMBP3BA6NNM3 1639 aa8.41□□□□□ -1.06
CASC3-202ENST00000394114 RIMBP3Q9UFD9 1639 aa8.41□□□□□ -1.06
CASC3-202ENST00000394114 RNF39Q9H2S5 420 aa8.41□□□□□ -1.06
CASC3-202ENST00000394114 AK7Q96M32 723 aa8.41□□□□□ -1.06
CASC3-202ENST00000394114 SHANK2Q9UPX8 1470 aa8.41□□□□□ -1.06
CASC3-202ENST00000394114 ZNF316A6NFI3 1004 aaPredicted RBP8.4□□□□□ -1.06
CASC3-202ENST00000394114 AFAP1Q8N556 730 aa8.4□□□□□ -1.06
CASC3-202ENST00000394114 KDM4CQ9H3R0 1056 aa8.4□□□□□ -1.06
CASC3-202ENST00000394114 TRAPPC8Q9Y2L5 1435 aa8.39□□□□□ -1.07
CASC3-202ENST00000394114 ABCA9Q8IUA7 1624 aa8.39□□□□□ -1.07
CASC3-202ENST00000394114 EIF5BO60841 1220 aaKnown RBP8.39□□□□□ -1.07
CASC3-202ENST00000394114 CAPN15O75808 1086 aa8.39□□□□□ -1.07
CASC3-202ENST00000394114 BCL11AQ9H165 835 aa8.39□□□□□ -1.07
CASC3-202ENST00000394114 ABCC1P33527 1531 aa8.39□□□□□ -1.07
CASC3-202ENST00000394114 FANCAO15360 1455 aa8.39□□□□□ -1.07
CASC3-202ENST00000394114 E2F4Q16254 413 aa8.39□□□□□ -1.07
CASC3-202ENST00000394114 MYT1LQ9UL68 1186 aa8.39□□□□□ -1.07
CASC3-202ENST00000394114 TONSLQ96HA7 1378 aa8.38□□□□□ -1.07
CASC3-202ENST00000394114 PLEKHH2Q8IVE3 1493 aa8.38□□□□□ -1.07
CASC3-202ENST00000394114 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms