RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
CALD1-203ENST00000393118 TARBP1Q13395 1621 aaKnown RBP13.87□□□□□ -0.19
CALD1-203ENST00000393118 RCAN3Q9UKA8 241 aa13.87□□□□□ -0.19
CALD1-203ENST00000393118 ARHGAP5Q13017 1502 aa13.87□□□□□ -0.19
CALD1-203ENST00000393118 ERICH6BQ5W0A0 696 aa13.87□□□□□ -0.19
CALD1-203ENST00000393118 DISP1Q96F81 1524 aa13.86□□□□□ -0.19
CALD1-203ENST00000393118 SAFB2Q14151 953 aaKnown RBP eCLIP13.86□□□□□ -0.19
CALD1-203ENST00000393118 RAPGEF6Q8TEU7 1601 aa13.86□□□□□ -0.19
CALD1-203ENST00000393118 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
CALD1-203ENST00000393118 KIAA0556O60303 1618 aa13.85□□□□□ -0.19
CALD1-203ENST00000393118 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.84□□□□□ -0.19
CALD1-203ENST00000393118 PBRM1Q86U86 1689 aa13.83□□□□□ -0.19
CALD1-203ENST00000393118 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.2
CALD1-203ENST00000393118 LAS1LQ9Y4W2 734 aaKnown RBP13.83□□□□□ -0.2
CALD1-203ENST00000393118 ATP10BO94823 1461 aa13.82□□□□□ -0.2
CALD1-203ENST00000393118 PLIN1O60240 522 aa13.81□□□□□ -0.2
CALD1-203ENST00000393118 CCDC146Q8IYE0 955 aa13.81□□□□□ -0.2
CALD1-203ENST00000393118 EIF4G3O43432 1585 aaKnown RBP13.8□□□□□ -0.2
CALD1-203ENST00000393118 PNISRQ8TF01 805 aaKnown RBP13.8□□□□□ -0.2
CALD1-203ENST00000393118 ARID4BQ4LE39 1312 aaPredicted RBP13.8□□□□□ -0.2
CALD1-203ENST00000393118 KDM6BO15054 1643 aa13.8□□□□□ -0.2
CALD1-203ENST00000393118 NEFMP07197 916 aa13.8□□□□□ -0.2
CALD1-203ENST00000393118 MSH5O43196 834 aa13.79□□□□□ -0.2
CALD1-203ENST00000393118 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
CALD1-203ENST00000393118 EXOC6Q8TAG9 804 aa13.78□□□□□ -0.2
CALD1-203ENST00000393118 ESF1Q9H501 851 aaKnown RBP13.78□□□□□ -0.2
CALD1-203ENST00000393118 STK26Q9P289 416 aa13.78□□□□□ -0.2
CALD1-203ENST00000393118 IL27Q8NEV9 243 aa13.78□□□□□ -0.2
CALD1-203ENST00000393118 KIF14Q15058 1648 aa13.77□□□□□ -0.2
CALD1-203ENST00000393118 CDCA7LQ96GN5 454 aa13.77□□□□□ -0.21
CALD1-203ENST00000393118 CCDC141Q6ZP82 1450 aa13.76□□□□□ -0.21
CALD1-203ENST00000393118 RGS3P49796 1198 aa13.76□□□□□ -0.21
CALD1-203ENST00000393118 ARXQ96QS3 562 aa13.76□□□□□ -0.21
CALD1-203ENST00000393118 FRAT1Q92837 279 aaPredicted RBP13.76□□□□□ -0.21
CALD1-203ENST00000393118 MORC1Q86VD1 984 aa13.75□□□□□ -0.21
CALD1-203ENST00000393118 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
CALD1-203ENST00000393118 RRP1P56182 461 aaKnown RBP13.74□□□□□ -0.21
CALD1-203ENST00000393118 WASHC2CQ9Y4E1 1318 aa13.74□□□□□ -0.21
CALD1-203ENST00000393118 PZPP20742 1482 aa13.74□□□□□ -0.21
CALD1-203ENST00000393118 CFAP70Q5T0N1 1121 aa13.73□□□□□ -0.21
CALD1-203ENST00000393118 MLECQ14165 292 aa13.73□□□□□ -0.21
CALD1-203ENST00000393118 POGKQ9P215 609 aa13.73□□□□□ -0.21
CALD1-203ENST00000393118 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
CALD1-203ENST00000393118 CFAP53Q96M91 514 aa13.72□□□□□ -0.21
CALD1-203ENST00000393118 PDE3BQ13370 1112 aa13.72□□□□□ -0.21
CALD1-203ENST00000393118 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
CALD1-203ENST00000393118 DNMT1P26358 1616 aaKnown RBP13.72□□□□□ -0.21
CALD1-203ENST00000393118 SRPK2P78362 688 aaKnown RBP13.72□□□□□ -0.21
CALD1-203ENST00000393118 PLEKHH2Q8IVE3 1493 aa13.72□□□□□ -0.21
CALD1-203ENST00000393118 U2SURPO15042 1029 aaKnown RBP13.71□□□□□ -0.21
CALD1-203ENST00000393118 ADAMTS8Q9UP79 889 aa13.71□□□□□ -0.22
CALD1-203ENST00000393118 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
CALD1-203ENST00000393118 EIF3AQ14152 1382 aaKnown RBP13.7□□□□□ -0.22
CALD1-203ENST00000393118 SCAPERQ9BY12 1400 aa13.7□□□□□ -0.22
CALD1-203ENST00000393118 TEX14Q8IWB6 1497 aa13.69□□□□□ -0.22
CALD1-203ENST00000393118 CEP170Q5SW79 1584 aa13.69□□□□□ -0.22
CALD1-203ENST00000393118 NUP160Q12769 1436 aa13.69□□□□□ -0.22
CALD1-203ENST00000393118 APAF1O14727 1248 aa13.68□□□□□ -0.22
CALD1-203ENST00000393118 SLC24A1O60721 1099 aa13.68□□□□□ -0.22
CALD1-203ENST00000393118 TMEM132EQ6IEE7 984 aa13.68□□□□□ -0.22
CALD1-203ENST00000393118 RRP7AQ9Y3A4 280 aaKnown RBP13.68□□□□□ -0.22
CALD1-203ENST00000393118 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
CALD1-203ENST00000393118 ITSN2Q9NZM3 1697 aa13.67□□□□□ -0.22
CALD1-203ENST00000393118 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
CALD1-203ENST00000393118 OSCARQ8IYS5 282 aa13.65□□□□□ -0.22
CALD1-203ENST00000393118 U2AF1L5P0DN76 240 aaPredicted RBP13.65□□□□□ -0.22
CALD1-203ENST00000393118 U2AF1Q01081 240 aaKnown RBP eCLIP13.65□□□□□ -0.22
CALD1-203ENST00000393118 PKNOX2Q96KN3 472 aa13.65□□□□□ -0.22
CALD1-203ENST00000393118 DENND4BO75064 1496 aaPredicted RBP13.65□□□□□ -0.22
CALD1-203ENST00000393118 LRRIQ1Q96JM4 1722 aa13.65□□□□□ -0.22
CALD1-203ENST00000393118 ERBINQ96RT1 1412 aa13.65□□□□□ -0.22
CALD1-203ENST00000393118 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
CALD1-203ENST00000393118 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
CALD1-203ENST00000393118 SYCP2Q9BX26 1530 aa13.64□□□□□ -0.23
CALD1-203ENST00000393118 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
CALD1-203ENST00000393118 CYB5RLQ6IPT4 315 aa13.62□□□□□ -0.23
CALD1-203ENST00000393118 DISP3Q9P2K9 1392 aa13.62□□□□□ -0.23
CALD1-203ENST00000393118 DHX29Q7Z478 1369 aaKnown RBP13.62□□□□□ -0.23
CALD1-203ENST00000393118 MAPK8IP3Q9UPT6 1336 aa13.62□□□□□ -0.23
CALD1-203ENST00000393118 VSIG10Q8N0Z9 540 aa13.61□□□□□ -0.23
CALD1-203ENST00000393118 FTSJ3Q8IY81 847 aaKnown RBP13.61□□□□□ -0.23
CALD1-203ENST00000393118 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
CALD1-203ENST00000393118 SPATA31E1Q6ZUB1 1445 aa13.6□□□□□ -0.23
CALD1-203ENST00000393118 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
CALD1-203ENST00000393118 CLUAP1Q96AJ1 413 aa13.6□□□□□ -0.23
CALD1-203ENST00000393118 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
CALD1-203ENST00000393118 FAM135AQ9P2D6 1515 aa13.6□□□□□ -0.23
CALD1-203ENST00000393118 UPF2Q9HAU5 1272 aaKnown RBP13.6□□□□□ -0.23
CALD1-203ENST00000393118 ADGRL2O95490 1459 aa13.6□□□□□ -0.23
CALD1-203ENST00000393118 NAP1L5Q96NT1 182 aaPredicted RBP13.59□□□□□ -0.23
CALD1-203ENST00000393118 RAPGEF3O95398 923 aa13.59□□□□□ -0.23
CALD1-203ENST00000393118 IPO9Q96P70 1041 aaKnown RBP13.59□□□□□ -0.23
CALD1-203ENST00000393118 PDE4AP27815 886 aa13.59□□□□□ -0.23
CALD1-203ENST00000393118 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
CALD1-203ENST00000393118 SLC12A5Q9H2X9 1139 aa13.58□□□□□ -0.24
CALD1-203ENST00000393118 UBE2Q2Q8WVN8 375 aa13.57□□□□□ -0.24
CALD1-203ENST00000393118 PRAG1Q86YV5 1406 aa13.57□□□□□ -0.24
CALD1-203ENST00000393118 TRAPPC8Q9Y2L5 1435 aa13.57□□□□□ -0.24
CALD1-203ENST00000393118 DDRGK1Q96HY6 314 aa13.56□□□□□ -0.24
CALD1-203ENST00000393118 MINK1Q8N4C8 1332 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms