RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 KIAA1468Q9P260 1216 aa4.46□□□□□ -1.7
RNU6-1239P-201ENST00000391310 TSR3Q9UJK0 312 aaKnown RBP4.46□□□□□ -1.7
RNU6-1239P-201ENST00000391310 ECM2O94769 699 aaPredicted RBP4.45□□□□□ -1.7
RNU6-1239P-201ENST00000391310 PPP1R15BQ5SWA1 713 aa4.45□□□□□ -1.7
RNU6-1239P-201ENST00000391310 PDZRN3Q9UPQ7 1066 aa4.45□□□□□ -1.7
RNU6-1239P-201ENST00000391310 RGL2O15211 777 aa4.44□□□□□ -1.7
RNU6-1239P-201ENST00000391310 FAM98CQ17RN3 349 aaKnown RBP4.44□□□□□ -1.7
RNU6-1239P-201ENST00000391310 FBXW7Q969H0 707 aa4.44□□□□□ -1.7
RNU6-1239P-201ENST00000391310 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.44□□□□□ -1.7
RNU6-1239P-201ENST00000391310 HPS5Q9UPZ3 1129 aa4.44□□□□□ -1.7
RNU6-1239P-201ENST00000391310 PCDHGA10Q9Y5H3 936 aa4.44□□□□□ -1.7
RNU6-1239P-201ENST00000391310 TJAP1Q5JTD0 557 aa4.43□□□□□ -1.7
RNU6-1239P-201ENST00000391310 LRCH3Q96II8 777 aa4.43□□□□□ -1.7
RNU6-1239P-201ENST00000391310 SEPT9Q9UHD8 586 aaPredicted RBP4.43□□□□□ -1.7
RNU6-1239P-201ENST00000391310 TYW1BQ6NUM6 668 aa4.42□□□□□ -1.7
RNU6-1239P-201ENST00000391310 PPP1R18Q6NYC8 613 aa4.42□□□□□ -1.7
RNU6-1239P-201ENST00000391310 TRIM6-TRIM34B2RNG4 842 aa4.4□□□□□ -1.71
RNU6-1239P-201ENST00000391310 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1239P-201ENST00000391310 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.4□□□□□ -1.71
RNU6-1239P-201ENST00000391310 PHF14O94880 888 aa4.39□□□□□ -1.71
RNU6-1239P-201ENST00000391310 PPP4CP60510 307 aa4.39□□□□□ -1.71
RNU6-1239P-201ENST00000391310 MAP3K9P80192 1104 aa4.39□□□□□ -1.71
RNU6-1239P-201ENST00000391310 HS6ST3Q8IZP7 471 aa4.39□□□□□ -1.71
RNU6-1239P-201ENST00000391310 IL21Q9HBE4 155 aa4.39□□□□□ -1.71
RNU6-1239P-201ENST00000391310 NCKAP5LQ9HCH0 1330 aa4.39□□□□□ -1.71
RNU6-1239P-201ENST00000391310 PDE4AP27815 886 aa4.38□□□□□ -1.71
RNU6-1239P-201ENST00000391310 PKD2Q13563 968 aa4.38□□□□□ -1.71
RNU6-1239P-201ENST00000391310 C6orf132Q5T0Z8 1188 aa4.38□□□□□ -1.71
RNU6-1239P-201ENST00000391310 TREML4Q6UXN2 200 aa4.38□□□□□ -1.71
RNU6-1239P-201ENST00000391310 MTRQ99707 1265 aa4.38□□□□□ -1.71
RNU6-1239P-201ENST00000391310 POTECB2RU33 542 aa4.37□□□□□ -1.71
RNU6-1239P-201ENST00000391310 MYT1Q01538 1121 aa4.37□□□□□ -1.71
RNU6-1239P-201ENST00000391310 DGAT1O75907 488 aa4.36□□□□□ -1.71
RNU6-1239P-201ENST00000391310 RYDENQ9NUL5 291 aaKnown RBP4.36□□□□□ -1.71
RNU6-1239P-201ENST00000391310 GGCXP38435 758 aa4.35□□□□□ -1.71
RNU6-1239P-201ENST00000391310 PKDCCQ504Y2 493 aa4.35□□□□□ -1.71
RNU6-1239P-201ENST00000391310 TRIM67Q6ZTA4 783 aa4.35□□□□□ -1.71
RNU6-1239P-201ENST00000391310 ZNF516Q92618 1163 aa4.35□□□□□ -1.71
RNU6-1239P-201ENST00000391310 DDX27Q96GQ7 796 aaKnown RBP4.35□□□□□ -1.71
RNU6-1239P-201ENST00000391310 EPAS1Q99814 870 aa4.35□□□□□ -1.71
RNU6-1239P-201ENST00000391310 PACS2Q86VP3 889 aa4.34□□□□□ -1.71
RNU6-1239P-201ENST00000391310 TMUB1Q9BVT8 246 aa4.34□□□□□ -1.71
RNU6-1239P-201ENST00000391310 EMILIN3Q9NT22 766 aa4.34□□□□□ -1.71
RNU6-1239P-201ENST00000391310 STK17AQ9UEE5 414 aa4.34□□□□□ -1.71
RNU6-1239P-201ENST00000391310 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
RNU6-1239P-201ENST00000391310 MFSD10Q14728 455 aa4.33□□□□□ -1.72
RNU6-1239P-201ENST00000391310 SAMD7Q7Z3H4 446 aa4.33□□□□□ -1.72
RNU6-1239P-201ENST00000391310 LARP6Q9BRS8 491 aaKnown RBP4.33□□□□□ -1.72
RNU6-1239P-201ENST00000391310 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
RNU6-1239P-201ENST00000391310 DNAJC5Q9H3Z4 198 aa4.33□□□□□ -1.72
RNU6-1239P-201ENST00000391310 PRR20EP86478 221 aa4.32□□□□□ -1.72
RNU6-1239P-201ENST00000391310 PRR20CP86479 221 aa4.32□□□□□ -1.72
RNU6-1239P-201ENST00000391310 PRR20DP86480 221 aa4.32□□□□□ -1.72
RNU6-1239P-201ENST00000391310 PRR20BP86481 221 aa4.32□□□□□ -1.72
RNU6-1239P-201ENST00000391310 PRR20AP86496 221 aa4.32□□□□□ -1.72
RNU6-1239P-201ENST00000391310 NKX2-3Q8TAU0 364 aa4.32□□□□□ -1.72
RNU6-1239P-201ENST00000391310 TSKSQ9UJT2 592 aa4.32□□□□□ -1.72
RNU6-1239P-201ENST00000391310 NKX1-1Q15270 411 aaPredicted RBP4.31□□□□□ -1.72
RNU6-1239P-201ENST00000391310 SLC19A1P41440 591 aa4.3□□□□□ -1.72
RNU6-1239P-201ENST00000391310 APLP1P51693 650 aa4.3□□□□□ -1.72
RNU6-1239P-201ENST00000391310 WFS1O76024 890 aa4.29□□□□□ -1.72
RNU6-1239P-201ENST00000391310 EMID1Q96A84 441 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1239P-201ENST00000391310 RBM33Q96EV2 1170 aaKnown RBP4.29□□□□□ -1.72
RNU6-1239P-201ENST00000391310 WIPF1O43516 503 aa4.28□□□□□ -1.72
RNU6-1239P-201ENST00000391310 CHGAP10645 457 aaKnown RBP4.28□□□□□ -1.72
RNU6-1239P-201ENST00000391310 INSM1Q01101 510 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1239P-201ENST00000391310 SPRYD7Q5W111 196 aa4.28□□□□□ -1.72
RNU6-1239P-201ENST00000391310 ZNF598Q86UK7 904 aaKnown RBP4.28□□□□□ -1.72
RNU6-1239P-201ENST00000391310 AAASQ9NRG9 546 aa4.28□□□□□ -1.72
RNU6-1239P-201ENST00000391310 FAM187AA6NFU0 413 aa4.27□□□□□ -1.73
RNU6-1239P-201ENST00000391310 RNF223E7ERA6 249 aa4.27□□□□□ -1.73
RNU6-1239P-201ENST00000391310 SMAPO00193 183 aa4.27□□□□□ -1.73
RNU6-1239P-201ENST00000391310 EN1Q05925 392 aaPredicted RBP4.27□□□□□ -1.73
RNU6-1239P-201ENST00000391310 NECTIN2Q92692 538 aa4.27□□□□□ -1.73
RNU6-1239P-201ENST00000391310 ST8SIA5O15466 376 aa4.26□□□□□ -1.73
RNU6-1239P-201ENST00000391310 ZPR1O75312 459 aa4.26□□□□□ -1.73
RNU6-1239P-201ENST00000391310 PRSS12P56730 875 aa4.26□□□□□ -1.73
RNU6-1239P-201ENST00000391310 COPS2P61201 443 aa4.26□□□□□ -1.73
RNU6-1239P-201ENST00000391310 TSR1Q2NL82 804 aaKnown RBP4.26□□□□□ -1.73
RNU6-1239P-201ENST00000391310 TATDN2Q93075 761 aa4.26□□□□□ -1.73
RNU6-1239P-201ENST00000391310 CDCA7LQ96GN5 454 aa4.26□□□□□ -1.73
RNU6-1239P-201ENST00000391310 NBPF26B4DH59 902 aa4.25□□□□□ -1.73
RNU6-1239P-201ENST00000391310 MAP3K7O43318 606 aa4.25□□□□□ -1.73
RNU6-1239P-201ENST00000391310 GDF9O60383 454 aa4.25□□□□□ -1.73
RNU6-1239P-201ENST00000391310 HDGFP51858 240 aaKnown RBP4.25□□□□□ -1.73
RNU6-1239P-201ENST00000391310 NFX1Q12986 1120 aaKnown RBP4.25□□□□□ -1.73
RNU6-1239P-201ENST00000391310 CRIPAKQ8N1N5 446 aa4.25□□□□□ -1.73
RNU6-1239P-201ENST00000391310 CERKQ8TCT0 537 aa4.25□□□□□ -1.73
RNU6-1239P-201ENST00000391310 DDX12PQ92771 950 aa4.25□□□□□ -1.73
RNU6-1239P-201ENST00000391310 FAM198AQ9UFP1 575 aa4.25□□□□□ -1.73
RNU6-1239P-201ENST00000391310 C3orf80F5H4A9 247 aa4.24□□□□□ -1.73
RNU6-1239P-201ENST00000391310 DPYSL4O14531 572 aa4.24□□□□□ -1.73
RNU6-1239P-201ENST00000391310 RNF40O75150 1001 aa4.24□□□□□ -1.73
RNU6-1239P-201ENST00000391310 CAMK2BQ13554 666 aa4.24□□□□□ -1.73
RNU6-1239P-201ENST00000391310 ZNF697Q5TEC3 545 aa4.24□□□□□ -1.73
RNU6-1239P-201ENST00000391310 ANKLE1Q8NAG6 615 aa4.24□□□□□ -1.73
RNU6-1239P-201ENST00000391310 TNFRSF10AO00220 468 aa4.23□□□□□ -1.73
RNU6-1239P-201ENST00000391310 NBR1Q14596 966 aa4.23□□□□□ -1.73
RNU6-1239P-201ENST00000391310 PNMA3Q9UL41 463 aa4.23□□□□□ -1.73
RNU6-1239P-201ENST00000391310 GTPBP6O43824 516 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms