RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 PROX2Q3B8N5 592 aa7.92□□□□□ -1.14
RNU6-1040P-201ENST00000383974 MRPL50Q8N5N7 158 aaKnown RBP7.92□□□□□ -1.14
RNU6-1040P-201ENST00000383974 NBPF3Q9H094 633 aa7.92□□□□□ -1.14
RNU6-1040P-201ENST00000383974 PTPN5P54829 565 aa7.91□□□□□ -1.14
RNU6-1040P-201ENST00000383974 THSD4Q6ZMP0 1018 aa7.91□□□□□ -1.14
RNU6-1040P-201ENST00000383974 DDX12PQ92771 950 aa7.91□□□□□ -1.14
RNU6-1040P-201ENST00000383974 GOLGA8CPA6NN73 597 aa7.9□□□□□ -1.14
RNU6-1040P-201ENST00000383974 PDIA6Q15084 440 aa7.9□□□□□ -1.14
RNU6-1040P-201ENST00000383974 WNT2BQ93097 391 aa7.9□□□□□ -1.14
RNU6-1040P-201ENST00000383974 EPAS1Q99814 870 aa7.9□□□□□ -1.14
RNU6-1040P-201ENST00000383974 RABGEF1Q9UJ41 708 aa7.89□□□□□ -1.15
RNU6-1040P-201ENST00000383974 C6orf132Q5T0Z8 1188 aa7.88□□□□□ -1.15
RNU6-1040P-201ENST00000383974 RBM33Q96EV2 1170 aaKnown RBP7.88□□□□□ -1.15
RNU6-1040P-201ENST00000383974 NBR1Q14596 966 aa7.87□□□□□ -1.15
RNU6-1040P-201ENST00000383974 E2F4Q16254 413 aa7.87□□□□□ -1.15
RNU6-1040P-201ENST00000383974 EN1Q05925 392 aaPredicted RBP7.85□□□□□ -1.15
RNU6-1040P-201ENST00000383974 SPDYE16A6NNV3 312 aaPredicted RBP7.84□□□□□ -1.15
RNU6-1040P-201ENST00000383974 TSR1Q2NL82 804 aaKnown RBP7.84□□□□□ -1.15
RNU6-1040P-201ENST00000383974 WDR70Q9NW82 654 aa7.84□□□□□ -1.15
RNU6-1040P-201ENST00000383974 KIAA1468Q9P260 1216 aa7.84□□□□□ -1.15
RNU6-1040P-201ENST00000383974 TRIM6-TRIM34B2RNG4 842 aa7.83□□□□□ -1.16
RNU6-1040P-201ENST00000383974 MAP3K7O43318 606 aa7.83□□□□□ -1.16
RNU6-1040P-201ENST00000383974 ANKK1Q8NFD2 765 aa7.83□□□□□ -1.16
RNU6-1040P-201ENST00000383974 LAPTM4BQ86VI4 370 aa7.82□□□□□ -1.16
RNU6-1040P-201ENST00000383974 SEPT9Q9UHD8 586 aaPredicted RBP7.82□□□□□ -1.16
RNU6-1040P-201ENST00000383974 ARIH1Q9Y4X5 557 aaPredicted RBP7.82□□□□□ -1.16
RNU6-1040P-201ENST00000383974 ONECUT3O60422 494 aaPredicted RBP7.81□□□□□ -1.16
RNU6-1040P-201ENST00000383974 BCAMP50895 628 aa7.81□□□□□ -1.16
RNU6-1040P-201ENST00000383974 PRIM1P49642 420 aaKnown RBP7.8□□□□□ -1.16
RNU6-1040P-201ENST00000383974 ZFRQ96KR1 1074 aaKnown RBP7.8□□□□□ -1.16
RNU6-1040P-201ENST00000383974 GRXCR2A6NFK2 248 aa7.79□□□□□ -1.16
RNU6-1040P-201ENST00000383974 TSKSQ9UJT2 592 aa7.79□□□□□ -1.16
RNU6-1040P-201ENST00000383974 SOWAHBA6NEL2 793 aa7.78□□□□□ -1.16
RNU6-1040P-201ENST00000383974 FAM98CQ17RN3 349 aaKnown RBP7.78□□□□□ -1.16
RNU6-1040P-201ENST00000383974 IFFO2Q5TF58 517 aa7.76□□□□□ -1.17
RNU6-1040P-201ENST00000383974 OSBPP22059 807 aa7.75□□□□□ -1.17
RNU6-1040P-201ENST00000383974 CDCA7LQ96GN5 454 aa7.75□□□□□ -1.17
RNU6-1040P-201ENST00000383974 CDHR5Q9HBB8 845 aa7.75□□□□□ -1.17
RNU6-1040P-201ENST00000383974 TSHZ2Q9NRE2 1034 aa7.75□□□□□ -1.17
RNU6-1040P-201ENST00000383974 PACS2Q86VP3 889 aa7.74□□□□□ -1.17
RNU6-1040P-201ENST00000383974 WBP1LQ9NX94 342 aa7.74□□□□□ -1.17
RNU6-1040P-201ENST00000383974 PRSS12P56730 875 aa7.73□□□□□ -1.17
RNU6-1040P-201ENST00000383974 CERKQ8TCT0 537 aa7.73□□□□□ -1.17
RNU6-1040P-201ENST00000383974 LRCH3Q96II8 777 aa7.73□□□□□ -1.17
RNU6-1040P-201ENST00000383974 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.73□□□□□ -1.17
RNU6-1040P-201ENST00000383974 FAM198AQ9UFP1 575 aa7.73□□□□□ -1.17
RNU6-1040P-201ENST00000383974 A0A0G2JS52 829 aa7.72□□□□□ -1.17
RNU6-1040P-201ENST00000383974 SMAPO00193 183 aa7.72□□□□□ -1.17
RNU6-1040P-201ENST00000383974 ITGBL1O95965 494 aaPredicted RBP7.72□□□□□ -1.17
RNU6-1040P-201ENST00000383974 NYAP1Q6ZVC0 841 aa7.72□□□□□ -1.17
RNU6-1040P-201ENST00000383974 HPS5Q9UPZ3 1129 aa7.72□□□□□ -1.17
RNU6-1040P-201ENST00000383974 KCNV2Q8TDN2 545 aa7.71□□□□□ -1.18
RNU6-1040P-201ENST00000383974 C3orf80F5H4A9 247 aa7.7□□□□□ -1.18
RNU6-1040P-201ENST00000383974 TSR3Q9UJK0 312 aaKnown RBP7.7□□□□□ -1.18
RNU6-1040P-201ENST00000383974 NBPF26B4DH59 902 aa7.69□□□□□ -1.18
RNU6-1040P-201ENST00000383974 SAMD7Q7Z3H4 446 aa7.68□□□□□ -1.18
RNU6-1040P-201ENST00000383974 ARHGEF1Q92888 912 aaKnown RBP7.68□□□□□ -1.18
RNU6-1040P-201ENST00000383974 TATDN2Q93075 761 aa7.68□□□□□ -1.18
RNU6-1040P-201ENST00000383974 RBM27Q9P2N5 1060 aaKnown RBP7.68□□□□□ -1.18
RNU6-1040P-201ENST00000383974 PNMA3Q9UL41 463 aa7.68□□□□□ -1.18
RNU6-1040P-201ENST00000383974 MLLT3P42568 568 aaPredicted RBP7.67□□□□□ -1.18
RNU6-1040P-201ENST00000383974 RGS20O76081 388 aa7.66□□□□□ -1.18
RNU6-1040P-201ENST00000383974 PADI6Q6TGC4 694 aa7.66□□□□□ -1.18
RNU6-1040P-201ENST00000383974 NPDC1Q9NQX5 325 aaPredicted RBP7.66□□□□□ -1.18
RNU6-1040P-201ENST00000383974 NUDT18Q6ZVK8 323 aa7.65□□□□□ -1.18
RNU6-1040P-201ENST00000383974 PPP4CP60510 307 aa7.64□□□□□ -1.19
RNU6-1040P-201ENST00000383974 KCNC4Q03721 635 aa7.64□□□□□ -1.19
RNU6-1040P-201ENST00000383974 TTC13Q8NBP0 860 aa7.64□□□□□ -1.19
RNU6-1040P-201ENST00000383974 RNF40O75150 1001 aa7.63□□□□□ -1.19
RNU6-1040P-201ENST00000383974 P3H3Q8IVL6 736 aa7.6□□□□□ -1.19
RNU6-1040P-201ENST00000383974 PTGDRQ13258 359 aa7.59□□□□□ -1.19
RNU6-1040P-201ENST00000383974 TJAP1Q5JTD0 557 aa7.59□□□□□ -1.19
RNU6-1040P-201ENST00000383974 APLP1P51693 650 aa7.58□□□□□ -1.2
RNU6-1040P-201ENST00000383974 HDGFP51858 240 aaKnown RBP7.58□□□□□ -1.2
RNU6-1040P-201ENST00000383974 SWT1Q5T5J6 900 aaKnown RBP7.58□□□□□ -1.2
RNU6-1040P-201ENST00000383974 MTRQ99707 1265 aa7.58□□□□□ -1.2
RNU6-1040P-201ENST00000383974 IRX2Q9BZI1 471 aaPredicted RBP7.58□□□□□ -1.2
RNU6-1040P-201ENST00000383974 EYA1Q99502 592 aa7.57□□□□□ -1.2
RNU6-1040P-201ENST00000383974 SEMA3EO15041 775 aa7.56□□□□□ -1.2
RNU6-1040P-201ENST00000383974 PLCB2Q00722 1185 aa7.56□□□□□ -1.2
RNU6-1040P-201ENST00000383974 SLF2Q8IX21 1173 aa7.55□□□□□ -1.2
RNU6-1040P-201ENST00000383974 NUTM2FA1L443 756 aa7.54□□□□□ -1.2
RNU6-1040P-201ENST00000383974 IL21Q9HBE4 155 aa7.54□□□□□ -1.2
RNU6-1040P-201ENST00000383974 ZNF516Q92618 1163 aa7.53□□□□□ -1.2
RNU6-1040P-201ENST00000383974 NECTIN2Q92692 538 aa7.53□□□□□ -1.2
RNU6-1040P-201ENST00000383974 ADGRG1Q9Y653 693 aa7.53□□□□□ -1.2
RNU6-1040P-201ENST00000383974 SLC4A3P48751 1232 aa7.52□□□□□ -1.21
RNU6-1040P-201ENST00000383974 FAM161AQ3B820 660 aa7.51□□□□□ -1.21
RNU6-1040P-201ENST00000383974 FCHSD2O94868 740 aa7.5□□□□□ -1.21
RNU6-1040P-201ENST00000383974 DNAJB2P25686 324 aa7.5□□□□□ -1.21
RNU6-1040P-201ENST00000383974 COPS2P61201 443 aa7.5□□□□□ -1.21
RNU6-1040P-201ENST00000383974 RBM46Q8TBY0 533 aaKnown RBP7.5□□□□□ -1.21
RNU6-1040P-201ENST00000383974 PPP1R18Q6NYC8 613 aa7.49□□□□□ -1.21
RNU6-1040P-201ENST00000383974 TMEM134Q9H6X4 195 aa7.49□□□□□ -1.21
RNU6-1040P-201ENST00000383974 TESPA1A2RU30 521 aaPredicted RBP7.48□□□□□ -1.21
RNU6-1040P-201ENST00000383974 RCCD1A6NED2 376 aa7.48□□□□□ -1.21
RNU6-1040P-201ENST00000383974 NKX2-3Q8TAU0 364 aa7.48□□□□□ -1.21
RNU6-1040P-201ENST00000383974 RBM26Q5T8P6 1007 aaKnown RBP7.47□□□□□ -1.21
RNU6-1040P-201ENST00000383974 PRR14Q9BWN1 585 aa7.47□□□□□ -1.21
RNU6-1040P-201ENST00000383974 PCDHB3Q9Y5E6 796 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms