RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 APLP2Q06481 763 aa20.45■□□□□ 0.86
RPAIN-202ENST00000381208 MIA2Q96PC5 1412 aa20.43■□□□□ 0.86
RPAIN-202ENST00000381208 FAM135AQ9P2D6 1515 aa20.43■□□□□ 0.86
RPAIN-202ENST00000381208 KIF3BO15066 747 aa20.42■□□□□ 0.86
RPAIN-202ENST00000381208 PTPRKQ15262 1439 aa20.41■□□□□ 0.86
RPAIN-202ENST00000381208 CLTCQ00610 1675 aaKnown RBP20.41■□□□□ 0.86
RPAIN-202ENST00000381208 STRCQ7RTU9 1775 aa20.4■□□□□ 0.86
RPAIN-202ENST00000381208 NCOA1Q15788 1441 aa20.4■□□□□ 0.86
RPAIN-202ENST00000381208 KANK4Q5T7N3 995 aaPredicted RBP20.4■□□□□ 0.86
RPAIN-202ENST00000381208 MYOM3Q5VTT5 1437 aa20.39■□□□□ 0.86
RPAIN-202ENST00000381208 PKD2Q13563 968 aa20.35■□□□□ 0.85
RPAIN-202ENST00000381208 WASHC2CQ9Y4E1 1318 aa20.35■□□□□ 0.85
RPAIN-202ENST00000381208 PLA2R1Q13018 1463 aa20.34■□□□□ 0.85
RPAIN-202ENST00000381208 KDM5DQ9BY66 1539 aa20.34■□□□□ 0.85
RPAIN-202ENST00000381208 CAMSAP1Q5T5Y3 1602 aa20.34■□□□□ 0.85
RPAIN-202ENST00000381208 MAST1Q9Y2H9 1570 aa20.34■□□□□ 0.85
RPAIN-202ENST00000381208 ZNF142P52746 1687 aaPredicted RBP20.31■□□□□ 0.84
RPAIN-202ENST00000381208 MYO3AQ8NEV4 1616 aa20.31■□□□□ 0.84
RPAIN-202ENST00000381208 CEP170BQ9Y4F5 1589 aaPredicted RBP20.31■□□□□ 0.84
RPAIN-202ENST00000381208 PZPP20742 1482 aa20.31■□□□□ 0.84
RPAIN-202ENST00000381208 A2ML1A8K2U0 1454 aa20.3■□□□□ 0.84
RPAIN-202ENST00000381208 TNRQ92752 1358 aa20.29■□□□□ 0.84
RPAIN-202ENST00000381208 NCKAP5LQ9HCH0 1330 aa20.26■□□□□ 0.83
RPAIN-202ENST00000381208 TCOF1Q13428 1488 aaKnown RBP20.26■□□□□ 0.83
RPAIN-202ENST00000381208 IQSEC2Q5JU85 1478 aa20.25■□□□□ 0.83
RPAIN-202ENST00000381208 EIF2AK4Q9P2K8 1649 aaKnown RBP20.25■□□□□ 0.83
RPAIN-202ENST00000381208 SHANK2Q9UPX8 1470 aa20.25■□□□□ 0.83
RPAIN-202ENST00000381208 FBXO31Q5XUX0 539 aaPredicted RBP20.24■□□□□ 0.83
RPAIN-202ENST00000381208 DUOX2Q9NRD8 1548 aa20.24■□□□□ 0.83
RPAIN-202ENST00000381208 RNF17Q9BXT8 1623 aaKnown RBP20.23■□□□□ 0.83
RPAIN-202ENST00000381208 NLRP1Q9C000 1473 aa20.23■□□□□ 0.83
RPAIN-202ENST00000381208 C1QBPQ07021 282 aaKnown RBP20.22■□□□□ 0.83
RPAIN-202ENST00000381208 THEMISQ8N1K5 641 aaPredicted RBP20.22■□□□□ 0.83
RPAIN-202ENST00000381208 KIF15Q9NS87 1388 aa20.21■□□□□ 0.83
RPAIN-202ENST00000381208 LTBP4Q8N2S1 1624 aa20.21■□□□□ 0.83
RPAIN-202ENST00000381208 ABCC5O15440 1437 aa20.21■□□□□ 0.83
RPAIN-202ENST00000381208 FGD6Q6ZV73 1430 aa20.21■□□□□ 0.83
RPAIN-202ENST00000381208 DNMT1P26358 1616 aaKnown RBP20.2■□□□□ 0.82
RPAIN-202ENST00000381208 PTPN23Q9H3S7 1636 aa20.2■□□□□ 0.82
RPAIN-202ENST00000381208 ZC3H13Q5T200 1668 aaKnown RBP20.2■□□□□ 0.82
RPAIN-202ENST00000381208 ABCC3O15438 1527 aa20.2■□□□□ 0.82
RPAIN-202ENST00000381208 ERBINQ96RT1 1412 aa20.19■□□□□ 0.82
RPAIN-202ENST00000381208 ANKLE2Q86XL3 938 aa20.18■□□□□ 0.82
RPAIN-202ENST00000381208 DAPK1P53355 1430 aa20.17■□□□□ 0.82
RPAIN-202ENST00000381208 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
RPAIN-202ENST00000381208 ANKRD30AQ9BXX3 1397 aa20.15■□□□□ 0.82
RPAIN-202ENST00000381208 ZNF335Q9H4Z2 1342 aaPredicted RBP20.15■□□□□ 0.82
RPAIN-202ENST00000381208 UGGT1Q9NYU2 1555 aa20.14■□□□□ 0.81
RPAIN-202ENST00000381208 SPATA31D1Q6ZQQ2 1576 aa20.13■□□□□ 0.81
RPAIN-202ENST00000381208 KANK1Q14678 1352 aa20.13■□□□□ 0.81
RPAIN-202ENST00000381208 ERVK-7P63135 1459 aa20.13■□□□□ 0.81
RPAIN-202ENST00000381208 MROH1Q8NDA8 1641 aa20.12■□□□□ 0.81
RPAIN-202ENST00000381208 CROCC2H7BZ55 1655 aa20.12■□□□□ 0.81
RPAIN-202ENST00000381208 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
RPAIN-202ENST00000381208 ARHGAP31Q2M1Z3 1444 aa20.12■□□□□ 0.81
RPAIN-202ENST00000381208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.11■□□□□ 0.81
RPAIN-202ENST00000381208 PRDM15P57071 1507 aaPredicted RBP20.11■□□□□ 0.81
RPAIN-202ENST00000381208 MED14O60244 1454 aa20.08■□□□□ 0.8
RPAIN-202ENST00000381208 POLR1AO95602 1720 aaPredicted RBP20.07■□□□□ 0.8
RPAIN-202ENST00000381208 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
RPAIN-202ENST00000381208 DEPDC5O75140 1603 aa20.06■□□□□ 0.8
RPAIN-202ENST00000381208 NEURL4Q96JN8 1562 aa20.06■□□□□ 0.8
RPAIN-202ENST00000381208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.06■□□□□ 0.82e-6■□□□□ 10.3
RPAIN-202ENST00000381208 CPS1P31327 1500 aa20.06■□□□□ 0.8
RPAIN-202ENST00000381208 ADGRL2O95490 1459 aa20.05■□□□□ 0.8
RPAIN-202ENST00000381208 NPHP4O75161 1426 aaPredicted RBP20.05■□□□□ 0.8
RPAIN-202ENST00000381208 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
RPAIN-202ENST00000381208 UBAP1LF5GYI3 381 aa20.04■□□□□ 0.8
RPAIN-202ENST00000381208 CEP152O94986 1710 aa20.03■□□□□ 0.8
RPAIN-202ENST00000381208 LMTK2Q8IWU2 1503 aa20.03■□□□□ 0.8
RPAIN-202ENST00000381208 PPP4R3CPQ6ZMV5 832 aa19.99■□□□□ 0.79
RPAIN-202ENST00000381208 TOM1O60784 492 aa19.98■□□□□ 0.79
RPAIN-202ENST00000381208 EID1Q9Y6B2 187 aa19.98■□□□□ 0.79
RPAIN-202ENST00000381208 VWDEQ8N2E2 1590 aa19.98■□□□□ 0.79
RPAIN-202ENST00000381208 ANKRD50Q9ULJ7 1429 aa19.98■□□□□ 0.79
RPAIN-202ENST00000381208 STAG3Q9UJ98 1225 aa19.97■□□□□ 0.79
RPAIN-202ENST00000381208 SCAF11Q99590 1463 aaKnown RBP19.97■□□□□ 0.79
RPAIN-202ENST00000381208 ARHGAP23Q9P227 1491 aa19.96■□□□□ 0.79
RPAIN-202ENST00000381208 SLIT1O75093 1534 aa19.96■□□□□ 0.79
RPAIN-202ENST00000381208 TXNDC2Q86VQ3 553 aa19.95■□□□□ 0.79
RPAIN-202ENST00000381208 CFAP65Q6ZU64 1925 aaKnown RBP19.95■□□□□ 0.78
RPAIN-202ENST00000381208 IQGAP1P46940 1657 aa19.95■□□□□ 0.78
RPAIN-202ENST00000381208 UBR1Q8IWV7 1749 aa19.95■□□□□ 0.78
RPAIN-202ENST00000381208 SLC52A1Q9NWF4 448 aa19.95■□□□□ 0.78
RPAIN-202ENST00000381208 RPRD2Q5VT52 1461 aaKnown RBP19.93■□□□□ 0.78
RPAIN-202ENST00000381208 ROCK1Q13464 1354 aa19.92■□□□□ 0.78
RPAIN-202ENST00000381208 TMEM2Q9UHN6 1383 aa19.92■□□□□ 0.78
RPAIN-202ENST00000381208 IDI1Q13907 227 aa19.92■□□□□ 0.78
RPAIN-202ENST00000381208 EFCAB6Q5THR3 1501 aa19.92■□□□□ 0.78
RPAIN-202ENST00000381208 NOS1P29475 1434 aa19.91■□□□□ 0.78
RPAIN-202ENST00000381208 LTKP29376 864 aa19.91■□□□□ 0.78
RPAIN-202ENST00000381208 DISP3Q9P2K9 1392 aa19.91■□□□□ 0.78
RPAIN-202ENST00000381208 KDM5AP29375 1690 aaKnown RBP19.9■□□□□ 0.78
RPAIN-202ENST00000381208 PIK3C2BO00750 1634 aa19.87■□□□□ 0.77
RPAIN-202ENST00000381208 SYNMO15061 1565 aa19.85■□□□□ 0.77
RPAIN-202ENST00000381208 HDGFP51858 240 aaKnown RBP19.84■□□□□ 0.77
RPAIN-202ENST00000381208 PIP4K2BP78356 416 aa19.84■□□□□ 0.77
RPAIN-202ENST00000381208 LRRC7Q96NW7 1537 aa19.84■□□□□ 0.77
RPAIN-202ENST00000381208 TET3O43151 1660 aa19.83■□□□□ 0.76
RPAIN-202ENST00000381208 ADGRB3O60242 1522 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms