RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 NOM1Q5C9Z4 860 aaKnown RBP6.14□□□□□ -1.43
PTPRD-203ENST00000381196 PDCL2Q8N4E4 241 aa6.14□□□□□ -1.43
PTPRD-203ENST00000381196 MYOM3Q5VTT5 1437 aa6.14□□□□□ -1.43
PTPRD-203ENST00000381196 PTPN23Q9H3S7 1636 aa6.13□□□□□ -1.43
PTPRD-203ENST00000381196 ABCA5Q8WWZ7 1642 aa6.13□□□□□ -1.43
PTPRD-203ENST00000381196 MCM5P33992 734 aa6.13□□□□□ -1.43
PTPRD-203ENST00000381196 KIF15Q9NS87 1388 aa6.13□□□□□ -1.43
PTPRD-203ENST00000381196 HFM1A2PYH4 1435 aa6.13□□□□□ -1.43
PTPRD-203ENST00000381196 CARMIL1Q5VZK9 1371 aa6.13□□□□□ -1.43
PTPRD-203ENST00000381196 TSHZ2Q9NRE2 1034 aa6.13□□□□□ -1.43
PTPRD-203ENST00000381196 RAB3GAP2Q9H2M9 1393 aa6.13□□□□□ -1.43
PTPRD-203ENST00000381196 GOLGA2Q08379 1002 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 MRS2Q9HD23 443 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 PDS5BQ9NTI5 1447 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 ABCA10Q8WWZ4 1543 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 C11orf95C9JLR9 678 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-203ENST00000381196 CSB-PGBD3P0DP91 1061 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 GSE1Q14687 1217 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 HSCBQ8IWL3 235 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 NAP1L5Q96NT1 182 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-203ENST00000381196 RRP7BPQ9NSQ0 103 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 FGD6Q6ZV73 1430 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 LAMC3Q9Y6N6 1575 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 TERF1P54274 439 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 RGL3Q3MIN7 710 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 CAMSAP2Q08AD1 1489 aa6.12□□□□□ -1.43
PTPRD-203ENST00000381196 CWC15Q9P013 229 aaKnown RBP6.11□□□□□ -1.43
PTPRD-203ENST00000381196 SETQ01105 290 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-203ENST00000381196 POLA1P09884 1462 aaPredicted RBP6.11□□□□□ -1.43
PTPRD-203ENST00000381196 CALD1Q05682 793 aaKnown RBP6.11□□□□□ -1.43
PTPRD-203ENST00000381196 CARMIL2Q6F5E8 1435 aa6.11□□□□□ -1.43
PTPRD-203ENST00000381196 PBRM1Q86U86 1689 aa6.11□□□□□ -1.43
PTPRD-203ENST00000381196 MEX3CQ5U5Q3 659 aaKnown RBP6.11□□□□□ -1.43
PTPRD-203ENST00000381196 GPS2Q13227 327 aa6.1□□□□□ -1.43
PTPRD-203ENST00000381196 EID1Q9Y6B2 187 aa6.1□□□□□ -1.43
PTPRD-203ENST00000381196 CENPQQ7L2Z9 268 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-203ENST00000381196 BCL11BQ9C0K0 894 aaPredicted RBP6.1□□□□□ -1.43
PTPRD-203ENST00000381196 SMG6Q86US8 1419 aaKnown RBP6.1□□□□□ -1.43
PTPRD-203ENST00000381196 KIF14Q15058 1648 aa6.1□□□□□ -1.43
PTPRD-203ENST00000381196 ATP6V1DQ9Y5K8 247 aa6.1□□□□□ -1.43
PTPRD-203ENST00000381196 SAMD9Q5K651 1589 aa6.1□□□□□ -1.43
PTPRD-203ENST00000381196 CCP110O43303 1012 aa6.09□□□□□ -1.43
PTPRD-203ENST00000381196 RNF20Q5VTR2 975 aa6.09□□□□□ -1.43
PTPRD-203ENST00000381196 CGNL1Q0VF96 1302 aa6.09□□□□□ -1.43
PTPRD-203ENST00000381196 MCCP23508 829 aa6.09□□□□□ -1.44
PTPRD-203ENST00000381196 GGT6Q6P531 493 aa6.09□□□□□ -1.44
PTPRD-203ENST00000381196 PMFBP1Q8TBY8 1022 aa6.09□□□□□ -1.44
PTPRD-203ENST00000381196 NUDCQ9Y266 331 aa6.09□□□□□ -1.44
PTPRD-203ENST00000381196 BRD4O60885 1362 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-203ENST00000381196 PHF23Q9BUL5 403 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-203ENST00000381196 HS1BP3Q53T59 392 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 HDAC5Q9UQL6 1122 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 CADPSQ9ULU8 1353 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 IQGAP2Q13576 1575 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 FOXD1Q16676 465 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 TEX35Q5T0J7 233 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 CIZ1Q9ULV3 898 aaPredicted RBP6.08□□□□□ -1.44
PTPRD-203ENST00000381196 PTMAP06454 111 aaKnown RBP6.08□□□□□ -1.44
PTPRD-203ENST00000381196 CCDC34Q96HJ3 373 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 ARHGEF12Q9NZN5 1544 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 CCDC7Q96M83 1385 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 KNSTRNQ9Y448 316 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 KIF3AQ9Y496 699 aa6.08□□□□□ -1.44
PTPRD-203ENST00000381196 TULP1O00294 542 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-203ENST00000381196 LETM1O95202 739 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-203ENST00000381196 MRE11P49959 708 aa6.07□□□□□ -1.44
PTPRD-203ENST00000381196 VIRMAQ69YN4 1812 aaKnown RBP6.07□□□□□ -1.44
PTPRD-203ENST00000381196 OSCARQ8IYS5 282 aa6.07□□□□□ -1.44
PTPRD-203ENST00000381196 TEX14Q8IWB6 1497 aa6.07□□□□□ -1.44
PTPRD-203ENST00000381196 KIF7Q2M1P5 1343 aa6.07□□□□□ -1.44
PTPRD-203ENST00000381196 TUBB4AP04350 444 aa6.07□□□□□ -1.44
PTPRD-203ENST00000381196 CT47B1P0C2W7 299 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-203ENST00000381196 FAM107BQ9H098 131 aa6.06□□□□□ -1.44
PTPRD-203ENST00000381196 CTR9Q6PD62 1173 aa6.06□□□□□ -1.44
PTPRD-203ENST00000381196 WWC1Q8IX03 1113 aa6.06□□□□□ -1.44
PTPRD-203ENST00000381196 PAK3O75914 559 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-203ENST00000381196 KIF2AO00139 706 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-203ENST00000381196 SALL2Q9Y467 1007 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-203ENST00000381196 REREQ9P2R6 1566 aa6.06□□□□□ -1.44
PTPRD-203ENST00000381196 MAPKBP1O60336 1514 aa6.06□□□□□ -1.44
PTPRD-203ENST00000381196 USP8P40818 1118 aa6.06□□□□□ -1.44
PTPRD-203ENST00000381196 SOX12O15370 315 aa6.06□□□□□ -1.44
PTPRD-203ENST00000381196 EFCAB2Q5VUJ9 269 aa6.06□□□□□ -1.44
PTPRD-203ENST00000381196 CROCC2H7BZ55 1655 aa6.05□□□□□ -1.44
PTPRD-203ENST00000381196 FANCD2Q9BXW9 1451 aa6.05□□□□□ -1.44
PTPRD-203ENST00000381196 RSPH4AQ5TD94 716 aa6.05□□□□□ -1.44
PTPRD-203ENST00000381196 AXDND1Q5T1B0 1012 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-203ENST00000381196 CYB5RLQ6IPT4 315 aa6.05□□□□□ -1.44
PTPRD-203ENST00000381196 ACBD3Q9H3P7 528 aa6.05□□□□□ -1.44
PTPRD-203ENST00000381196 TUBB4BP68371 445 aa6.05□□□□□ -1.44
PTPRD-203ENST00000381196 FAM9BQ8IZU0 186 aa6.05□□□□□ -1.44
PTPRD-203ENST00000381196 FAM184AQ8NB25 1140 aa6.05□□□□□ -1.44
PTPRD-203ENST00000381196 OS9Q13438 667 aaPredicted RBP6.05□□□□□ -1.44
PTPRD-203ENST00000381196 DIAPH3Q9NSV4 1193 aa6.05□□□□□ -1.44
PTPRD-203ENST00000381196 SRPK2P78362 688 aaKnown RBP6.05□□□□□ -1.44
PTPRD-203ENST00000381196 DNTTIP2Q5QJE6 756 aaKnown RBP6.05□□□□□ -1.44
PTPRD-203ENST00000381196 DAPK1P53355 1430 aa6.04□□□□□ -1.44
PTPRD-203ENST00000381196 PLEKHH1Q9ULM0 1364 aa6.04□□□□□ -1.44
PTPRD-203ENST00000381196 PES1O00541 588 aaKnown RBP6.04□□□□□ -1.44
PTPRD-203ENST00000381196 IPO8O15397 1037 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms