RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 GLI2P10070 1586 aa16.29■□□□□ 0.2
PITRM1-202ENST00000380989 PPRC1Q5VV67 1664 aaKnown RBP16.28■□□□□ 0.2
PITRM1-202ENST00000380989 KIF3BO15066 747 aa16.28■□□□□ 0.2
PITRM1-202ENST00000380989 PLXNC1O60486 1568 aa16.28■□□□□ 0.2
PITRM1-202ENST00000380989 ZNF518AQ6AHZ1 1483 aa16.28■□□□□ 0.2
PITRM1-202ENST00000380989 KIDINS220Q9ULH0 1771 aa16.27■□□□□ 0.2
PITRM1-202ENST00000380989 INO80Q9ULG1 1556 aaPredicted RBP16.26■□□□□ 0.19
PITRM1-202ENST00000380989 DUOX2Q9NRD8 1548 aa16.26■□□□□ 0.19
PITRM1-202ENST00000380989 NEO1Q92859 1461 aa16.25■□□□□ 0.19
PITRM1-202ENST00000380989 CFAP74Q9C0B2 1584 aa16.24■□□□□ 0.19
PITRM1-202ENST00000380989 YEATS2Q9ULM3 1422 aa16.24■□□□□ 0.19
PITRM1-202ENST00000380989 COL17A1Q9UMD9 1497 aaPredicted RBP16.24■□□□□ 0.19
PITRM1-202ENST00000380989 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
PITRM1-202ENST00000380989 ANKRD30BQ9BXX2 1392 aa16.22■□□□□ 0.19
PITRM1-202ENST00000380989 GGT6Q6P531 493 aa16.22■□□□□ 0.19
PITRM1-202ENST00000380989 FAM135AQ9P2D6 1515 aa16.22■□□□□ 0.19
PITRM1-202ENST00000380989 KDM5CP41229 1560 aa16.21■□□□□ 0.19
PITRM1-202ENST00000380989 TONSLQ96HA7 1378 aa16.2■□□□□ 0.18
PITRM1-202ENST00000380989 ERBINQ96RT1 1412 aa16.2■□□□□ 0.18
PITRM1-202ENST00000380989 RICTORQ6R327 1708 aa16.2■□□□□ 0.18
PITRM1-202ENST00000380989 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
PITRM1-202ENST00000380989 FRMPD1Q5SYB0 1578 aa16.2■□□□□ 0.18
PITRM1-202ENST00000380989 ABCA6Q8N139 1617 aa16.2■□□□□ 0.18
PITRM1-202ENST00000380989 DHX29Q7Z478 1369 aaKnown RBP16.19■□□□□ 0.18
PITRM1-202ENST00000380989 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
PITRM1-202ENST00000380989 NEFLP07196 543 aa16.18■□□□□ 0.18
PITRM1-202ENST00000380989 A2MP01023 1474 aa16.17■□□□□ 0.18
PITRM1-202ENST00000380989 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
PITRM1-202ENST00000380989 MLH3Q9UHC1 1453 aa16.17■□□□□ 0.18
PITRM1-202ENST00000380989 UNC13BO14795 1591 aa16.16■□□□□ 0.18
PITRM1-202ENST00000380989 TEX14Q8IWB6 1497 aa16.15■□□□□ 0.18
PITRM1-202ENST00000380989 PPP1R15AO75807 674 aaPredicted RBP16.15■□□□□ 0.18
PITRM1-202ENST00000380989 KDM5DQ9BY66 1539 aa16.14■□□□□ 0.17
PITRM1-202ENST00000380989 DIP2CQ9Y2E4 1556 aa16.13■□□□□ 0.17
PITRM1-202ENST00000380989 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
PITRM1-202ENST00000380989 MLECQ14165 292 aa16.13■□□□□ 0.17
PITRM1-202ENST00000380989 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
PITRM1-202ENST00000380989 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
PITRM1-202ENST00000380989 IQGAP3Q86VI3 1631 aa16.11■□□□□ 0.17
PITRM1-202ENST00000380989 PLA2R1Q13018 1463 aa16.11■□□□□ 0.17
PITRM1-202ENST00000380989 MROH1Q8NDA8 1641 aa16.11■□□□□ 0.17
PITRM1-202ENST00000380989 RPRD2Q5VT52 1461 aaKnown RBP16.11■□□□□ 0.17
PITRM1-202ENST00000380989 MAGI2Q86UL8 1455 aa16.11■□□□□ 0.17
PITRM1-202ENST00000380989 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
PITRM1-202ENST00000380989 CFAP65Q6ZU64 1925 aaKnown RBP16.09■□□□□ 0.17
PITRM1-202ENST00000380989 SIGLEC1Q9BZZ2 1709 aa16.08■□□□□ 0.16
PITRM1-202ENST00000380989 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.16
PITRM1-202ENST00000380989 HNRNPUQ00839 825 aaKnown RBP eCLIP16.07■□□□□ 0.16
PITRM1-202ENST00000380989 DEPDC5O75140 1603 aa16.07■□□□□ 0.16
PITRM1-202ENST00000380989 WASHC2CQ9Y4E1 1318 aa16.07■□□□□ 0.16
PITRM1-202ENST00000380989 E9PCH4 1651 aa16.07■□□□□ 0.16
PITRM1-202ENST00000380989 CEP152O94986 1710 aa16.06■□□□□ 0.16
PITRM1-202ENST00000380989 KANK1Q14678 1352 aa16.06■□□□□ 0.16
PITRM1-202ENST00000380989 ANP32CO43423 234 aa16.04■□□□□ 0.16
PITRM1-202ENST00000380989 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
PITRM1-202ENST00000380989 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
PITRM1-202ENST00000380989 UGGT1Q9NYU2 1555 aa16.04■□□□□ 0.16
PITRM1-202ENST00000380989 EIF2AK4Q9P2K8 1649 aaKnown RBP16.04■□□□□ 0.16
PITRM1-202ENST00000380989 NBR1Q14596 966 aa16.04■□□□□ 0.16
PITRM1-202ENST00000380989 DCAF11Q8TEB1 546 aa16.04■□□□□ 0.16
PITRM1-202ENST00000380989 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
PITRM1-202ENST00000380989 ZMYM4Q5VZL5 1548 aa16.03■□□□□ 0.16
PITRM1-202ENST00000380989 CCDC184Q52MB2 194 aa16.03■□□□□ 0.16
PITRM1-202ENST00000380989 ERICH6Q7L0X2 663 aa16.02■□□□□ 0.16
PITRM1-202ENST00000380989 ATP10AO60312 1499 aa16.02■□□□□ 0.15
PITRM1-202ENST00000380989 VWDEQ8N2E2 1590 aa16.02■□□□□ 0.15
PITRM1-202ENST00000380989 ARID4BQ4LE39 1312 aaPredicted RBP16.01■□□□□ 0.15
PITRM1-202ENST00000380989 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
PITRM1-202ENST00000380989 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
PITRM1-202ENST00000380989 RNF17Q9BXT8 1623 aaKnown RBP15.99■□□□□ 0.15
PITRM1-202ENST00000380989 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
PITRM1-202ENST00000380989 TET3O43151 1660 aa15.99■□□□□ 0.15
PITRM1-202ENST00000380989 NPATQ14207 1427 aa15.98■□□□□ 0.15
PITRM1-202ENST00000380989 CHGAP10645 457 aaKnown RBP15.98■□□□□ 0.15
PITRM1-202ENST00000380989 FBXO31Q5XUX0 539 aaPredicted RBP15.98■□□□□ 0.15
PITRM1-202ENST00000380989 ABCC3O15438 1527 aa15.97■□□□□ 0.15
PITRM1-202ENST00000380989 EFCAB6Q5THR3 1501 aa15.96■□□□□ 0.15
PITRM1-202ENST00000380989 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
PITRM1-202ENST00000380989 CLTCL1P53675 1640 aa15.95■□□□□ 0.14
PITRM1-202ENST00000380989 ARHGEF40Q8TER5 1519 aa15.94■□□□□ 0.14
PITRM1-202ENST00000380989 NUTM2DQ5VT03 806 aaPredicted RBP15.93■□□□□ 0.14
PITRM1-202ENST00000380989 PAK3O75914 559 aaPredicted RBP15.92■□□□□ 0.14
PITRM1-202ENST00000380989 PTPRTO14522 1441 aa15.92■□□□□ 0.14
PITRM1-202ENST00000380989 DEKP35659 375 aaKnown RBP15.92■□□□□ 0.14
PITRM1-202ENST00000380989 TRPM2O94759 1503 aa15.91■□□□□ 0.14
PITRM1-202ENST00000380989 CAMSAP1Q5T5Y3 1602 aa15.91■□□□□ 0.14
PITRM1-202ENST00000380989 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
PITRM1-202ENST00000380989 BCORL1Q5H9F3 1711 aa15.91■□□□□ 0.14
PITRM1-202ENST00000380989 HSPA5P11021 654 aaKnown RBP15.91■□□□□ 0.14
PITRM1-202ENST00000380989 NBPF1Q3BBV0 1214 aa15.9■□□□□ 0.14
PITRM1-202ENST00000380989 LMTK2Q8IWU2 1503 aa15.9■□□□□ 0.14
PITRM1-202ENST00000380989 SPATA31E1Q6ZUB1 1445 aa15.89■□□□□ 0.13
PITRM1-202ENST00000380989 CLTCQ00610 1675 aaKnown RBP15.88■□□□□ 0.13
PITRM1-202ENST00000380989 CEBPAP49715 358 aaPredicted RBP15.88■□□□□ 0.13
PITRM1-202ENST00000380989 IDI1Q13907 227 aa15.87■□□□□ 0.13
PITRM1-202ENST00000380989 ANO8Q9HCE9 1232 aaPredicted RBP15.86■□□□□ 0.13
PITRM1-202ENST00000380989 RTN4Q9NQC3 1192 aaKnown RBP15.85■□□□□ 0.13
PITRM1-202ENST00000380989 ESF1Q9H501 851 aaKnown RBP15.85■□□□□ 0.13
PITRM1-202ENST00000380989 MROH2AA6NES4 1674 aa15.85■□□□□ 0.13
PITRM1-202ENST00000380989 C11orf95C9JLR9 678 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms