RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 MYBBP1AQ9BQG0 1328 aaKnown RBP15.87■□□□□ 0.13
GABPB1-203ENST00000380877 NAIPQ13075 1403 aa15.86■□□□□ 0.13
GABPB1-203ENST00000380877 MS4A1P11836 297 aa15.85■□□□□ 0.13
GABPB1-203ENST00000380877 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
GABPB1-203ENST00000380877 RCAN3Q9UKA8 241 aa15.84■□□□□ 0.13
GABPB1-203ENST00000380877 CCDC7Q96M83 1385 aa15.84■□□□□ 0.13
GABPB1-203ENST00000380877 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
GABPB1-203ENST00000380877 SCAPERQ9BY12 1400 aa15.84■□□□□ 0.13
GABPB1-203ENST00000380877 KIAA1107Q9UPP5 1409 aa15.83■□□□□ 0.13
GABPB1-203ENST00000380877 RGS3P49796 1198 aa15.83■□□□□ 0.12
GABPB1-203ENST00000380877 EVC2Q86UK5 1308 aa15.82■□□□□ 0.12
GABPB1-203ENST00000380877 NUTM2FA1L443 756 aa15.82■□□□□ 0.12
GABPB1-203ENST00000380877 ARHGEF11O15085 1522 aa15.82■□□□□ 0.12
GABPB1-203ENST00000380877 ROCK1Q13464 1354 aa15.8■□□□□ 0.12
GABPB1-203ENST00000380877 MINK1Q8N4C8 1332 aaPredicted RBP15.8■□□□□ 0.12
GABPB1-203ENST00000380877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.8■□□□□ 0.12
GABPB1-203ENST00000380877 CCDC146Q8IYE0 955 aa15.8■□□□□ 0.12
GABPB1-203ENST00000380877 CHMP4BQ9H444 224 aaKnown RBP15.8■□□□□ 0.12
GABPB1-203ENST00000380877 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
GABPB1-203ENST00000380877 WASHC2AQ641Q2 1341 aa15.79■□□□□ 0.12
GABPB1-203ENST00000380877 GOLGA2Q08379 1002 aa15.78■□□□□ 0.12
GABPB1-203ENST00000380877 NBPF8Q3BBV2 869 aa15.78■□□□□ 0.12
GABPB1-203ENST00000380877 ERICH6BQ5W0A0 696 aa15.78■□□□□ 0.12
GABPB1-203ENST00000380877 CENPJQ9HC77 1338 aaPredicted RBP15.78■□□□□ 0.12
GABPB1-203ENST00000380877 PDE3BQ13370 1112 aa15.78■□□□□ 0.12
GABPB1-203ENST00000380877 RTF1Q92541 710 aaKnown RBP15.78■□□□□ 0.12
GABPB1-203ENST00000380877 CGNL1Q0VF96 1302 aa15.77■□□□□ 0.11
GABPB1-203ENST00000380877 RAPGEF3O95398 923 aa15.77■□□□□ 0.11
GABPB1-203ENST00000380877 NBR1Q14596 966 aa15.76■□□□□ 0.11
GABPB1-203ENST00000380877 ARXQ96QS3 562 aa15.76■□□□□ 0.11
GABPB1-203ENST00000380877 ABCC5O15440 1437 aa15.75■□□□□ 0.11
GABPB1-203ENST00000380877 CFAP70Q5T0N1 1121 aa15.75■□□□□ 0.11
GABPB1-203ENST00000380877 CALD1Q05682 793 aaKnown RBP15.74■□□□□ 0.11
GABPB1-203ENST00000380877 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
GABPB1-203ENST00000380877 PTPN23Q9H3S7 1636 aa15.74■□□□□ 0.11
GABPB1-203ENST00000380877 CAMSAP2Q08AD1 1489 aa15.74■□□□□ 0.11
GABPB1-203ENST00000380877 NBPF1Q3BBV0 1214 aa15.74■□□□□ 0.11
GABPB1-203ENST00000380877 CCDC141Q6ZP82 1450 aa15.74■□□□□ 0.11
GABPB1-203ENST00000380877 CNTLNQ9NXG0 1405 aa15.74■□□□□ 0.11
GABPB1-203ENST00000380877 TMEM132EQ6IEE7 984 aa15.74■□□□□ 0.11
GABPB1-203ENST00000380877 BECN1Q14457 450 aa15.73■□□□□ 0.11
GABPB1-203ENST00000380877 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.71■□□□□ 0.11
GABPB1-203ENST00000380877 IPO8O15397 1037 aaKnown RBP15.71■□□□□ 0.11
GABPB1-203ENST00000380877 ZBED9Q6R2W3 1325 aa15.71■□□□□ 0.1
GABPB1-203ENST00000380877 KIF14Q15058 1648 aa15.69■□□□□ 0.1
GABPB1-203ENST00000380877 AMPHP49418 695 aa15.69■□□□□ 0.1
GABPB1-203ENST00000380877 RRP7AQ9Y3A4 280 aaKnown RBP15.69■□□□□ 0.1
GABPB1-203ENST00000380877 AKNAQ7Z591 1439 aa15.68■□□□□ 0.1
GABPB1-203ENST00000380877 NCOA1Q15788 1441 aa15.68■□□□□ 0.1
GABPB1-203ENST00000380877 COG3Q96JB2 828 aa15.67■□□□□ 0.1
GABPB1-203ENST00000380877 THOC2Q8NI27 1593 aaKnown RBP15.67■□□□□ 0.1
GABPB1-203ENST00000380877 CSB-PGBD3P0DP91 1061 aa15.66■□□□□ 0.1
GABPB1-203ENST00000380877 WDR97A6NE52 1622 aa15.66■□□□□ 0.1
GABPB1-203ENST00000380877 ANKRD30BQ9BXX2 1392 aa15.66■□□□□ 0.1
GABPB1-203ENST00000380877 CD109Q6YHK3 1445 aa15.65■□□□□ 0.1
GABPB1-203ENST00000380877 SMC4Q9NTJ3 1288 aa15.65■□□□□ 0.1
GABPB1-203ENST00000380877 CASC1Q6TDU7 716 aa15.65■□□□□ 0.1
GABPB1-203ENST00000380877 APAF1O14727 1248 aa15.65■□□□□ 0.1
GABPB1-203ENST00000380877 SLC52A1Q9NWF4 448 aa15.64■□□□□ 0.09
GABPB1-203ENST00000380877 LTV1Q96GA3 475 aaPredicted RBP15.64■□□□□ 0.09
GABPB1-203ENST00000380877 LMOD3Q0VAK6 560 aa15.63■□□□□ 0.09
GABPB1-203ENST00000380877 ITPRIPQ8IWB1 547 aa15.63■□□□□ 0.09
GABPB1-203ENST00000380877 CABP2Q9NPB3 220 aa15.63■□□□□ 0.09
GABPB1-203ENST00000380877 OS9Q13438 667 aaPredicted RBP15.62■□□□□ 0.09
GABPB1-203ENST00000380877 CLUAP1Q96AJ1 413 aa15.62■□□□□ 0.09
GABPB1-203ENST00000380877 GPATCH8Q9UKJ3 1502 aaKnown RBP15.62■□□□□ 0.09
GABPB1-203ENST00000380877 NUP153P49790 1475 aaKnown RBP15.62■□□□□ 0.09
GABPB1-203ENST00000380877 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
GABPB1-203ENST00000380877 EIF5BO60841 1220 aaKnown RBP15.62■□□□□ 0.09
GABPB1-203ENST00000380877 ANP32BQ92688 251 aaKnown RBP15.62■□□□□ 0.09
GABPB1-203ENST00000380877 KIF21AQ7Z4S6 1674 aa15.61■□□□□ 0.09
GABPB1-203ENST00000380877 ATP10BO94823 1461 aa15.61■□□□□ 0.09
GABPB1-203ENST00000380877 ADGRL1O94910 1474 aa15.61■□□□□ 0.09
GABPB1-203ENST00000380877 RAPGEF6Q8TEU7 1601 aa15.6■□□□□ 0.09
GABPB1-203ENST00000380877 E9PSI1 815 aa15.59■□□□□ 0.09
GABPB1-203ENST00000380877 UGGT2Q9NYU1 1516 aa15.59■□□□□ 0.09
GABPB1-203ENST00000380877 RWDD1Q9H446 243 aaPredicted RBP15.59■□□□□ 0.09
GABPB1-203ENST00000380877 GGNBP2Q9H3C7 697 aa15.58■□□□□ 0.09
GABPB1-203ENST00000380877 DIAPH1O60610 1272 aaKnown RBP15.58■□□□□ 0.08
GABPB1-203ENST00000380877 STK31Q9BXU1 1019 aa15.58■□□□□ 0.08
GABPB1-203ENST00000380877 CTTNBP2Q8WZ74 1663 aa15.58■□□□□ 0.08
GABPB1-203ENST00000380877 RBM19Q9Y4C8 960 aaKnown RBP15.58■□□□□ 0.08
GABPB1-203ENST00000380877 BRD4O60885 1362 aaPredicted RBP15.57■□□□□ 0.08
GABPB1-203ENST00000380877 PTPRKQ15262 1439 aa15.57■□□□□ 0.08
GABPB1-203ENST00000380877 ERBINQ96RT1 1412 aa15.57■□□□□ 0.08
GABPB1-203ENST00000380877 NGEFQ8N5V2 710 aa15.56■□□□□ 0.08
GABPB1-203ENST00000380877 TXNDC2Q86VQ3 553 aa15.56■□□□□ 0.08
GABPB1-203ENST00000380877 PRAM1Q96QH2 718 aa15.56■□□□□ 0.08
GABPB1-203ENST00000380877 CHMP4AQ9BY43 222 aa15.56■□□□□ 0.08
GABPB1-203ENST00000380877 TCERG1O14776 1098 aaKnown RBP15.55■□□□□ 0.08
GABPB1-203ENST00000380877 PLIN1O60240 522 aa15.55■□□□□ 0.08
GABPB1-203ENST00000380877 BCL2L13Q9BXK5 485 aa15.55■□□□□ 0.08
GABPB1-203ENST00000380877 RPGRIP1LQ68CZ1 1315 aa15.55■□□□□ 0.08
GABPB1-203ENST00000380877 RRP1P56182 461 aaKnown RBP15.54■□□□□ 0.08
GABPB1-203ENST00000380877 APBB1O00213 710 aa15.54■□□□□ 0.08
GABPB1-203ENST00000380877 SLC12A5Q9H2X9 1139 aa15.54■□□□□ 0.08
GABPB1-203ENST00000380877 PMFBP1Q8TBY8 1022 aa15.54■□□□□ 0.08
GABPB1-203ENST00000380877 FANCAO15360 1455 aa15.54■□□□□ 0.08
GABPB1-203ENST00000380877 KIAA0556O60303 1618 aa15.53■□□□□ 0.08
GABPB1-203ENST00000380877 WDR62O43379 1518 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms