RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
BRF1-203ENST00000379937 NPM2Q86SE8 214 aaKnown RBP21.06■□□□□ 0.96
BRF1-203ENST00000379937 ROCK1Q13464 1354 aa21.06■□□□□ 0.96
BRF1-203ENST00000379937 OSCARQ8IYS5 282 aa21.06■□□□□ 0.96
BRF1-203ENST00000379937 KDM5BQ9UGL1 1544 aa21.05■□□□□ 0.96
BRF1-203ENST00000379937 RBM19Q9Y4C8 960 aaKnown RBP21.03■□□□□ 0.96
BRF1-203ENST00000379937 CCDC136Q96JN2 1154 aa20.99■□□□□ 0.95
BRF1-203ENST00000379937 TEX14Q8IWB6 1497 aa20.99■□□□□ 0.95
BRF1-203ENST00000379937 NUTM2FA1L443 756 aa20.98■□□□□ 0.95
BRF1-203ENST00000379937 STAG3Q9UJ98 1225 aa20.98■□□□□ 0.95
BRF1-203ENST00000379937 DNMT1P26358 1616 aaKnown RBP20.97■□□□□ 0.95
BRF1-203ENST00000379937 RRP7AQ9Y3A4 280 aaKnown RBP20.97■□□□□ 0.95
BRF1-203ENST00000379937 KNSTRNQ9Y448 316 aa20.97■□□□□ 0.95
BRF1-203ENST00000379937 DISP3Q9P2K9 1392 aa20.96■□□□□ 0.95
BRF1-203ENST00000379937 WASHC2CQ9Y4E1 1318 aa20.95■□□□□ 0.95
BRF1-203ENST00000379937 CFAP65Q6ZU64 1925 aaKnown RBP20.95■□□□□ 0.94
BRF1-203ENST00000379937 PPM1GO15355 546 aaPredicted RBP20.94■□□□□ 0.94
BRF1-203ENST00000379937 TMF1P82094 1093 aa20.94■□□□□ 0.94
BRF1-203ENST00000379937 ADGRF5Q8IZF2 1346 aa20.94■□□□□ 0.94
BRF1-203ENST00000379937 CCDC141Q6ZP82 1450 aa20.93■□□□□ 0.94
BRF1-203ENST00000379937 ARHGEF12Q9NZN5 1544 aa20.93■□□□□ 0.94
BRF1-203ENST00000379937 ABCC10Q5T3U5 1492 aa20.92■□□□□ 0.94
BRF1-203ENST00000379937 PNISRQ8TF01 805 aaKnown RBP20.92■□□□□ 0.94
BRF1-203ENST00000379937 MBD5Q9P267 1494 aa20.92■□□□□ 0.94
BRF1-203ENST00000379937 CHD1O14646 1710 aa20.91■□□□□ 0.94
BRF1-203ENST00000379937 FBLN1P23142 703 aa20.9■□□□□ 0.94
BRF1-203ENST00000379937 SOX12O15370 315 aa20.89■□□□□ 0.94
BRF1-203ENST00000379937 TTC37Q6PGP7 1564 aa20.89■□□□□ 0.93
BRF1-203ENST00000379937 ADAMTS8Q9UP79 889 aa20.89■□□□□ 0.93
BRF1-203ENST00000379937 ERICH6Q7L0X2 663 aa20.88■□□□□ 0.93
BRF1-203ENST00000379937 WDR43Q15061 677 aaKnown RBP eCLIP20.87■□□□□ 0.93
BRF1-203ENST00000379937 FBXO31Q5XUX0 539 aaPredicted RBP20.87■□□□□ 0.93
BRF1-203ENST00000379937 EXOC6Q8TAG9 804 aa20.87■□□□□ 0.93
BRF1-203ENST00000379937 SLC12A5Q9H2X9 1139 aa20.87■□□□□ 0.93
BRF1-203ENST00000379937 FAM69CQ0P6D2 419 aa20.86■□□□□ 0.93
BRF1-203ENST00000379937 ABCA8O94911 1581 aa20.86■□□□□ 0.93
BRF1-203ENST00000379937 RSPH4AQ5TD94 716 aa20.86■□□□□ 0.93
BRF1-203ENST00000379937 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.84■□□□□ 0.932e-7■■■■■ 33.4
BRF1-203ENST00000379937 ARID4BQ4LE39 1312 aaPredicted RBP20.84■□□□□ 0.93
BRF1-203ENST00000379937 DHX29Q7Z478 1369 aaKnown RBP20.84■□□□□ 0.93
BRF1-203ENST00000379937 SPATA31E1Q6ZUB1 1445 aa20.83■□□□□ 0.93
BRF1-203ENST00000379937 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.92
BRF1-203ENST00000379937 TESK2Q96S53 571 aa20.83■□□□□ 0.92
BRF1-203ENST00000379937 GCC2Q8IWJ2 1684 aa20.82■□□□□ 0.92
BRF1-203ENST00000379937 FAM135AQ9P2D6 1515 aa20.82■□□□□ 0.92
BRF1-203ENST00000379937 BCL2L13Q9BXK5 485 aa20.82■□□□□ 0.92
BRF1-203ENST00000379937 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
BRF1-203ENST00000379937 CDC42BPAQ5VT25 1732 aa20.81■□□□□ 0.92
BRF1-203ENST00000379937 ZBED9Q6R2W3 1325 aa20.81■□□□□ 0.92
BRF1-203ENST00000379937 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
BRF1-203ENST00000379937 NBR1Q14596 966 aa20.8■□□□□ 0.92
BRF1-203ENST00000379937 PLA2R1Q13018 1463 aa20.8■□□□□ 0.92
BRF1-203ENST00000379937 NUDCQ9Y266 331 aa20.79■□□□□ 0.92
BRF1-203ENST00000379937 MINK1Q8N4C8 1332 aaPredicted RBP20.79■□□□□ 0.92
BRF1-203ENST00000379937 MYBBP1AQ9BQG0 1328 aaKnown RBP20.79■□□□□ 0.92
BRF1-203ENST00000379937 PPP4R2Q9NY27 417 aa20.79■□□□□ 0.92
BRF1-203ENST00000379937 UGGT1Q9NYU2 1555 aa20.78■□□□□ 0.92
BRF1-203ENST00000379937 SRPK2P78362 688 aaKnown RBP20.78■□□□□ 0.92
BRF1-203ENST00000379937 NLRP13Q86W25 1043 aa20.78■□□□□ 0.92
BRF1-203ENST00000379937 APAF1O14727 1248 aa20.77■□□□□ 0.92
BRF1-203ENST00000379937 C20orf194Q5TEA3 1177 aa20.77■□□□□ 0.92
BRF1-203ENST00000379937 FANCAO15360 1455 aa20.75■□□□□ 0.91
BRF1-203ENST00000379937 BCORL1Q5H9F3 1711 aa20.75■□□□□ 0.91
BRF1-203ENST00000379937 ASXL2Q76L83 1435 aa20.75■□□□□ 0.91
BRF1-203ENST00000379937 KANK1Q14678 1352 aa20.74■□□□□ 0.91
BRF1-203ENST00000379937 PLCH2O75038 1416 aa20.74■□□□□ 0.91
BRF1-203ENST00000379937 FRAT1Q92837 279 aaPredicted RBP20.74■□□□□ 0.91
BRF1-203ENST00000379937 RCAN3Q9UKA8 241 aa20.74■□□□□ 0.91
BRF1-203ENST00000379937 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.73■□□□□ 0.91
BRF1-203ENST00000379937 A2MP01023 1474 aa20.73■□□□□ 0.91
BRF1-203ENST00000379937 U2SURPO15042 1029 aaKnown RBP20.73■□□□□ 0.91
BRF1-203ENST00000379937 ADGRL1O94910 1474 aa20.72■□□□□ 0.91
BRF1-203ENST00000379937 PER1O15534 1290 aaPredicted RBP20.71■□□□□ 0.91
BRF1-203ENST00000379937 ITSN2Q9NZM3 1697 aa20.7■□□□□ 0.9
BRF1-203ENST00000379937 PRAG1Q86YV5 1406 aa20.7■□□□□ 0.9
BRF1-203ENST00000379937 RGS3P49796 1198 aa20.7■□□□□ 0.9
BRF1-203ENST00000379937 CLUAP1Q96AJ1 413 aa20.7■□□□□ 0.9
BRF1-203ENST00000379937 POGKQ9P215 609 aa20.7■□□□□ 0.9
BRF1-203ENST00000379937 GGNBP2Q9H3C7 697 aa20.69■□□□□ 0.9
BRF1-203ENST00000379937 PPP2R1AP30153 589 aa20.69■□□□□ 0.9
BRF1-203ENST00000379937 RALBP1Q15311 655 aa20.69■□□□□ 0.9
BRF1-203ENST00000379937 ABCC2Q92887 1545 aa20.68■□□□□ 0.9
BRF1-203ENST00000379937 CANXP27824 592 aaKnown RBP20.68■□□□□ 0.9
BRF1-203ENST00000379937 MORC1Q86VD1 984 aa20.68■□□□□ 0.9
BRF1-203ENST00000379937 MSH5O43196 834 aa20.67■□□□□ 0.9
BRF1-203ENST00000379937 IDI1Q13907 227 aa20.67■□□□□ 0.9
BRF1-203ENST00000379937 CDC42BPBQ9Y5S2 1711 aa20.67■□□□□ 0.9
BRF1-203ENST00000379937 ADGRL2O95490 1459 aa20.67■□□□□ 0.9
BRF1-203ENST00000379937 RBM33Q96EV2 1170 aaKnown RBP20.66■□□□□ 0.9
BRF1-203ENST00000379937 ERBINQ96RT1 1412 aa20.66■□□□□ 0.9
BRF1-203ENST00000379937 DMRT2Q9Y5R5 561 aa20.66■□□□□ 0.9
BRF1-203ENST00000379937 CRBNQ96SW2 442 aa20.65■□□□□ 0.9
BRF1-203ENST00000379937 CD109Q6YHK3 1445 aa20.65■□□□□ 0.9
BRF1-203ENST00000379937 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
BRF1-203ENST00000379937 SPINK5Q9NQ38 1064 aaPredicted RBP20.65■□□□□ 0.9
BRF1-203ENST00000379937 TCERG1O14776 1098 aaKnown RBP20.65■□□□□ 0.9
BRF1-203ENST00000379937 ESF1Q9H501 851 aaKnown RBP20.65■□□□□ 0.9
BRF1-203ENST00000379937 LAS1LQ9Y4W2 734 aaKnown RBP20.65■□□□□ 0.9
BRF1-203ENST00000379937 WAPLQ7Z5K2 1190 aa20.64■□□□□ 0.89
BRF1-203ENST00000379937 NCKAP5LQ9HCH0 1330 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms