RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 CCDC141Q6ZP82 1450 aa21.81■■□□□ 1.08
PCNA-202ENST00000379160 DHX29Q7Z478 1369 aaKnown RBP21.81■■□□□ 1.08
PCNA-202ENST00000379160 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
PCNA-202ENST00000379160 PTPRKQ15262 1439 aa21.8■■□□□ 1.08
PCNA-202ENST00000379160 MYO3AQ8NEV4 1616 aa21.79■■□□□ 1.08
PCNA-202ENST00000379160 DCAF8L1A6NGE4 600 aa21.78■■□□□ 1.08
PCNA-202ENST00000379160 RSPH4AQ5TD94 716 aa21.77■■□□□ 1.08
PCNA-202ENST00000379160 LRRC9Q6ZRR7 1453 aa21.77■■□□□ 1.08
PCNA-202ENST00000379160 KIF3BO15066 747 aa21.76■■□□□ 1.07
PCNA-202ENST00000379160 ZNF142P52746 1687 aaPredicted RBP21.75■■□□□ 1.07
PCNA-202ENST00000379160 NCKAP5LQ9HCH0 1330 aa21.75■■□□□ 1.07
PCNA-202ENST00000379160 CEP170BQ9Y4F5 1589 aaPredicted RBP21.75■■□□□ 1.07
PCNA-202ENST00000379160 TSPY4P0CV99 314 aa21.73■■□□□ 1.07
PCNA-202ENST00000379160 TSPY10P0CW01 314 aa21.73■■□□□ 1.07
PCNA-202ENST00000379160 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
PCNA-202ENST00000379160 ARHGEF5Q12774 1597 aa21.72■■□□□ 1.07
PCNA-202ENST00000379160 LTBP4Q8N2S1 1624 aa21.72■■□□□ 1.07
PCNA-202ENST00000379160 FBXO31Q5XUX0 539 aaPredicted RBP21.69■■□□□ 1.06
PCNA-202ENST00000379160 KDM5DQ9BY66 1539 aa21.68■■□□□ 1.06
PCNA-202ENST00000379160 WASHC2CQ9Y4E1 1318 aa21.68■■□□□ 1.06
PCNA-202ENST00000379160 PLA2R1Q13018 1463 aa21.68■■□□□ 1.06
PCNA-202ENST00000379160 PKD2Q13563 968 aa21.67■■□□□ 1.06
PCNA-202ENST00000379160 MAP3K1Q13233 1512 aa21.67■■□□□ 1.06
PCNA-202ENST00000379160 A2ML1A8K2U0 1454 aa21.66■■□□□ 1.06
PCNA-202ENST00000379160 DNMT1P26358 1616 aaKnown RBP21.65■■□□□ 1.06
PCNA-202ENST00000379160 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
PCNA-202ENST00000379160 ZNF335Q9H4Z2 1342 aaPredicted RBP21.65■■□□□ 1.06
PCNA-202ENST00000379160 TNRQ92752 1358 aa21.64■■□□□ 1.06
PCNA-202ENST00000379160 PZPP20742 1482 aa21.64■■□□□ 1.06
PCNA-202ENST00000379160 FAM135AQ9P2D6 1515 aa21.63■■□□□ 1.05
PCNA-202ENST00000379160 MYOM3Q5VTT5 1437 aa21.63■■□□□ 1.05
PCNA-202ENST00000379160 MAST1Q9Y2H9 1570 aa21.61■■□□□ 1.05
PCNA-202ENST00000379160 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
PCNA-202ENST00000379160 IQSEC2Q5JU85 1478 aa21.6■■□□□ 1.05
PCNA-202ENST00000379160 RNF17Q9BXT8 1623 aaKnown RBP21.57■■□□□ 1.04
PCNA-202ENST00000379160 APLP2Q06481 763 aa21.57■■□□□ 1.04
PCNA-202ENST00000379160 POLR1AO95602 1720 aaPredicted RBP21.56■■□□□ 1.04
PCNA-202ENST00000379160 EIF2AK4Q9P2K8 1649 aaKnown RBP21.54■■□□□ 1.04
PCNA-202ENST00000379160 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.54■■□□□ 1.04
PCNA-202ENST00000379160 ABCC3O15438 1527 aa21.54■■□□□ 1.04
PCNA-202ENST00000379160 NLRP1Q9C000 1473 aa21.53■■□□□ 1.04
PCNA-202ENST00000379160 ZC3H13Q5T200 1668 aaKnown RBP21.53■■□□□ 1.04
PCNA-202ENST00000379160 NEURL4Q96JN8 1562 aa21.52■■□□□ 1.04
PCNA-202ENST00000379160 UGGT1Q9NYU2 1555 aa21.52■■□□□ 1.04
PCNA-202ENST00000379160 UBAP1LF5GYI3 381 aa21.51■■□□□ 1.03
PCNA-202ENST00000379160 THEMISQ8N1K5 641 aaPredicted RBP21.51■■□□□ 1.03
PCNA-202ENST00000379160 MROH1Q8NDA8 1641 aa21.51■■□□□ 1.03
PCNA-202ENST00000379160 PTPN23Q9H3S7 1636 aa21.51■■□□□ 1.03
PCNA-202ENST00000379160 DUOX2Q9NRD8 1548 aa21.51■■□□□ 1.03
PCNA-202ENST00000379160 ANKLE2Q86XL3 938 aa21.5■■□□□ 1.03
PCNA-202ENST00000379160 CEP152O94986 1710 aa21.5■■□□□ 1.03
PCNA-202ENST00000379160 DISP3Q9P2K9 1392 aa21.5■■□□□ 1.03
PCNA-202ENST00000379160 CFAP65Q6ZU64 1925 aaKnown RBP21.49■■□□□ 1.03
PCNA-202ENST00000379160 CROCC2H7BZ55 1655 aa21.49■■□□□ 1.03
PCNA-202ENST00000379160 RRP7BPQ9NSQ0 103 aa21.48■■□□□ 1.03
PCNA-202ENST00000379160 ABCC5O15440 1437 aa21.48■■□□□ 1.03
PCNA-202ENST00000379160 KIF15Q9NS87 1388 aa21.47■■□□□ 1.03
PCNA-202ENST00000379160 SPATA31D1Q6ZQQ2 1576 aa21.47■■□□□ 1.03
PCNA-202ENST00000379160 ERVK-7P63135 1459 aa21.46■■□□□ 1.03
PCNA-202ENST00000379160 SHANK2Q9UPX8 1470 aa21.46■■□□□ 1.03
PCNA-202ENST00000379160 DAPK1P53355 1430 aa21.44■■□□□ 1.02
PCNA-202ENST00000379160 FGD6Q6ZV73 1430 aa21.44■■□□□ 1.02
PCNA-202ENST00000379160 NPHP4O75161 1426 aaPredicted RBP21.43■■□□□ 1.02
PCNA-202ENST00000379160 ERBINQ96RT1 1412 aa21.42■■□□□ 1.02
PCNA-202ENST00000379160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.42■■□□□ 1.023e-10■■□□□ 14.4
PCNA-202ENST00000379160 DEPDC5O75140 1603 aa21.42■■□□□ 1.02
PCNA-202ENST00000379160 CPS1P31327 1500 aa21.41■■□□□ 1.02
PCNA-202ENST00000379160 CHIC2Q9UKJ5 165 aa21.41■■□□□ 1.02
PCNA-202ENST00000379160 MED14O60244 1454 aa21.41■■□□□ 1.02
PCNA-202ENST00000379160 PRDM15P57071 1507 aaPredicted RBP21.41■■□□□ 1.02
PCNA-202ENST00000379160 IQGAP1P46940 1657 aa21.39■■□□□ 1.02
PCNA-202ENST00000379160 VWDEQ8N2E2 1590 aa21.39■■□□□ 1.02
PCNA-202ENST00000379160 ILDR2Q71H61 639 aa21.38■■□□□ 1.01
PCNA-202ENST00000379160 UBR1Q8IWV7 1749 aa21.38■■□□□ 1.01
PCNA-202ENST00000379160 ANKRD30AQ9BXX3 1397 aa21.36■■□□□ 1.01
PCNA-202ENST00000379160 ARHGAP31Q2M1Z3 1444 aa21.36■■□□□ 1.01
PCNA-202ENST00000379160 PIP4K2BP78356 416 aa21.36■■□□□ 1.01
PCNA-202ENST00000379160 KANK1Q14678 1352 aa21.34■■□□□ 1.01
PCNA-202ENST00000379160 TOM1O60784 492 aa21.34■■□□□ 1.01
PCNA-202ENST00000379160 FAM50AQ14320 339 aaKnown RBP21.32■■□□□ 1
PCNA-202ENST00000379160 STRCP1A6NGW2 1772 aa21.31■■□□□ 1
PCNA-202ENST00000379160 SCAF11Q99590 1463 aaKnown RBP21.31■■□□□ 1
PCNA-202ENST00000379160 LTKP29376 864 aa21.29■■□□□ 1
PCNA-202ENST00000379160 TXNDC2Q86VQ3 553 aa21.29■■□□□ 1
PCNA-202ENST00000379160 PIK3C2BO00750 1634 aa21.29■■□□□ 1
PCNA-202ENST00000379160 HSPA1LP34931 641 aa21.28■■□□□ 1
PCNA-202ENST00000379160 FOXD4L1Q9NU39 408 aa21.28■■□□□ 1
PCNA-202ENST00000379160 SLIT1O75093 1534 aa21.27■■□□□ 1
PCNA-202ENST00000379160 STAG3Q9UJ98 1225 aa21.27■■□□□ 1
PCNA-202ENST00000379160 ARHGAP23Q9P227 1491 aa21.26■□□□□ 0.99
PCNA-202ENST00000379160 LMTK2Q8IWU2 1503 aa21.26■□□□□ 0.99
PCNA-202ENST00000379160 SLC4A2P04920 1241 aa21.25■□□□□ 0.99
PCNA-202ENST00000379160 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
PCNA-202ENST00000379160 LRRC7Q96NW7 1537 aa21.25■□□□□ 0.99
PCNA-202ENST00000379160 ADGRL2O95490 1459 aa21.25■□□□□ 0.99
PCNA-202ENST00000379160 IDI1Q13907 227 aa21.23■□□□□ 0.99
PCNA-202ENST00000379160 ALKQ9UM73 1620 aa21.23■□□□□ 0.99
PCNA-202ENST00000379160 SYNMO15061 1565 aa21.22■□□□□ 0.99
PCNA-202ENST00000379160 TMEM2Q9UHN6 1383 aa21.22■□□□□ 0.99
PCNA-202ENST00000379160 SOCS7O14512 581 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms