RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 EIF2AK4Q9P2K8 1649 aaKnown RBP18.06■□□□□ 0.48
PCNA-201ENST00000379143 ERBINQ96RT1 1412 aa18.05■□□□□ 0.48
PCNA-201ENST00000379143 KIF3BO15066 747 aa18.02■□□□□ 0.48
PCNA-201ENST00000379143 MLECQ14165 292 aa18.02■□□□□ 0.48
PCNA-201ENST00000379143 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
PCNA-201ENST00000379143 GGT6Q6P531 493 aa17.99■□□□□ 0.47
PCNA-201ENST00000379143 ANKRD50Q9ULJ7 1429 aa17.99■□□□□ 0.47
PCNA-201ENST00000379143 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
PCNA-201ENST00000379143 ESF1Q9H501 851 aaKnown RBP17.98■□□□□ 0.47
PCNA-201ENST00000379143 RNF17Q9BXT8 1623 aaKnown RBP17.98■□□□□ 0.47
PCNA-201ENST00000379143 FAM135AQ9P2D6 1515 aa17.98■□□□□ 0.47
PCNA-201ENST00000379143 CNTLNQ9NXG0 1405 aa17.97■□□□□ 0.47
PCNA-201ENST00000379143 GCC2Q8IWJ2 1684 aa17.95■□□□□ 0.46
PCNA-201ENST00000379143 HFM1A2PYH4 1435 aa17.94■□□□□ 0.46
PCNA-201ENST00000379143 DEPDC5O75140 1603 aa17.94■□□□□ 0.46
PCNA-201ENST00000379143 HSPA2P54652 639 aa17.93■□□□□ 0.46
PCNA-201ENST00000379143 NAIPQ13075 1403 aa17.93■□□□□ 0.46
PCNA-201ENST00000379143 PRDM15P57071 1507 aaPredicted RBP17.92■□□□□ 0.46
PCNA-201ENST00000379143 KDM5DQ9BY66 1539 aa17.92■□□□□ 0.46
PCNA-201ENST00000379143 MROH2AA6NES4 1674 aa17.92■□□□□ 0.46
PCNA-201ENST00000379143 KANK1Q14678 1352 aa17.92■□□□□ 0.46
PCNA-201ENST00000379143 MROH1Q8NDA8 1641 aa17.92■□□□□ 0.46
PCNA-201ENST00000379143 ZC3H13Q5T200 1668 aaKnown RBP17.92■□□□□ 0.46
PCNA-201ENST00000379143 CLTCQ00610 1675 aaKnown RBP17.91■□□□□ 0.46
PCNA-201ENST00000379143 WASHC2CQ9Y4E1 1318 aa17.91■□□□□ 0.46
PCNA-201ENST00000379143 UNC13BO14795 1591 aa17.88■□□□□ 0.45
PCNA-201ENST00000379143 ADRA2BP18089 450 aa17.87■□□□□ 0.45
PCNA-201ENST00000379143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.453e-10■■□□□ 14.4
PCNA-201ENST00000379143 ABCC3O15438 1527 aa17.87■□□□□ 0.45
PCNA-201ENST00000379143 ZMYM3Q14202 1370 aa17.86■□□□□ 0.45
PCNA-201ENST00000379143 PREX1Q8TCU6 1659 aa17.86■□□□□ 0.45
PCNA-201ENST00000379143 VWDEQ8N2E2 1590 aa17.85■□□□□ 0.45
PCNA-201ENST00000379143 ACIN1Q9UKV3 1341 aaKnown RBP17.85■□□□□ 0.45
PCNA-201ENST00000379143 C3P01024 1663 aa17.85■□□□□ 0.45
PCNA-201ENST00000379143 CERKQ8TCT0 537 aa17.85■□□□□ 0.45
PCNA-201ENST00000379143 LMTK2Q8IWU2 1503 aa17.84■□□□□ 0.45
PCNA-201ENST00000379143 CEP152O94986 1710 aa17.84■□□□□ 0.45
PCNA-201ENST00000379143 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
PCNA-201ENST00000379143 SETD5Q9C0A6 1442 aa17.82■□□□□ 0.44
PCNA-201ENST00000379143 CAMSAP1Q5T5Y3 1602 aa17.82■□□□□ 0.44
PCNA-201ENST00000379143 IQGAP3Q86VI3 1631 aa17.81■□□□□ 0.44
PCNA-201ENST00000379143 STRCQ7RTU9 1775 aa17.81■□□□□ 0.44
PCNA-201ENST00000379143 CEBPAP49715 358 aaPredicted RBP17.8■□□□□ 0.44
PCNA-201ENST00000379143 NUP155O75694 1391 aa17.8■□□□□ 0.44
PCNA-201ENST00000379143 PZPP20742 1482 aa17.8■□□□□ 0.44
PCNA-201ENST00000379143 NPATQ14207 1427 aa17.8■□□□□ 0.44
PCNA-201ENST00000379143 ARHGAP31Q2M1Z3 1444 aa17.8■□□□□ 0.44
PCNA-201ENST00000379143 EFCAB6Q5THR3 1501 aa17.78■□□□□ 0.44
PCNA-201ENST00000379143 TET3O43151 1660 aa17.78■□□□□ 0.44
PCNA-201ENST00000379143 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
PCNA-201ENST00000379143 RPRD2Q5VT52 1461 aaKnown RBP17.75■□□□□ 0.43
PCNA-201ENST00000379143 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
PCNA-201ENST00000379143 HRCP23327 699 aa17.74■□□□□ 0.43
PCNA-201ENST00000379143 SETD1BQ9UPS6 1966 aaKnown RBP17.74■□□□□ 0.43
PCNA-201ENST00000379143 SPATA31D1Q6ZQQ2 1576 aa17.72■□□□□ 0.43
PCNA-201ENST00000379143 ERVK-7P63135 1459 aa17.72■□□□□ 0.43
PCNA-201ENST00000379143 UHRF1BP1Q6BDS2 1440 aa17.71■□□□□ 0.43
PCNA-201ENST00000379143 FBXO31Q5XUX0 539 aaPredicted RBP17.71■□□□□ 0.42
PCNA-201ENST00000379143 TNRQ92752 1358 aa17.7■□□□□ 0.42
PCNA-201ENST00000379143 E9PCH4 1651 aa17.7■□□□□ 0.42
PCNA-201ENST00000379143 ILDR2Q71H61 639 aa17.7■□□□□ 0.42
PCNA-201ENST00000379143 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
PCNA-201ENST00000379143 DISP3Q9P2K9 1392 aa17.69■□□□□ 0.42
PCNA-201ENST00000379143 MYO3AQ8NEV4 1616 aa17.68■□□□□ 0.42
PCNA-201ENST00000379143 NOS1P29475 1434 aa17.67■□□□□ 0.42
PCNA-201ENST00000379143 CFAP65Q6ZU64 1925 aaKnown RBP17.67■□□□□ 0.42
PCNA-201ENST00000379143 NLRP1Q9C000 1473 aa17.67■□□□□ 0.42
PCNA-201ENST00000379143 ZNF142P52746 1687 aaPredicted RBP17.65■□□□□ 0.42
PCNA-201ENST00000379143 MPHOSPH9Q99550 1183 aa17.65■□□□□ 0.42
PCNA-201ENST00000379143 DMRT2Q9Y5R5 561 aa17.65■□□□□ 0.42
PCNA-201ENST00000379143 SOCS7O14512 581 aa17.64■□□□□ 0.41
PCNA-201ENST00000379143 PKD2Q13563 968 aa17.64■□□□□ 0.41
PCNA-201ENST00000379143 CEP170BQ9Y4F5 1589 aaPredicted RBP17.64■□□□□ 0.41
PCNA-201ENST00000379143 SLC52A1Q9NWF4 448 aa17.63■□□□□ 0.41
PCNA-201ENST00000379143 A2ML1A8K2U0 1454 aa17.63■□□□□ 0.41
PCNA-201ENST00000379143 SYNMO15061 1565 aa17.62■□□□□ 0.41
PCNA-201ENST00000379143 SPHKAPQ2M3C7 1700 aa17.62■□□□□ 0.41
PCNA-201ENST00000379143 PTPRTO14522 1441 aa17.62■□□□□ 0.41
PCNA-201ENST00000379143 LTBP4Q8N2S1 1624 aa17.6■□□□□ 0.41
PCNA-201ENST00000379143 PIAS4Q8N2W9 510 aaPredicted RBP17.59■□□□□ 0.41
PCNA-201ENST00000379143 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
PCNA-201ENST00000379143 KDM5AP29375 1690 aaKnown RBP17.59■□□□□ 0.41
PCNA-201ENST00000379143 TRPM2O94759 1503 aa17.58■□□□□ 0.4
PCNA-201ENST00000379143 PIK3C2BO00750 1634 aa17.58■□□□□ 0.4
PCNA-201ENST00000379143 IDI1Q13907 227 aa17.57■□□□□ 0.4
PCNA-201ENST00000379143 THEMISQ8N1K5 641 aaPredicted RBP17.57■□□□□ 0.4
PCNA-201ENST00000379143 UBR1Q8IWV7 1749 aa17.55■□□□□ 0.4
PCNA-201ENST00000379143 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
PCNA-201ENST00000379143 IQSEC2Q5JU85 1478 aa17.55■□□□□ 0.4
PCNA-201ENST00000379143 STAG3Q9UJ98 1225 aa17.54■□□□□ 0.4
PCNA-201ENST00000379143 PLA2R1Q13018 1463 aa17.53■□□□□ 0.4
PCNA-201ENST00000379143 ADGRB3O60242 1522 aa17.53■□□□□ 0.4
PCNA-201ENST00000379143 CCDC144AA2RUR9 1427 aa17.5■□□□□ 0.39
PCNA-201ENST00000379143 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
PCNA-201ENST00000379143 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
PCNA-201ENST00000379143 SLIT1O75093 1534 aa17.48■□□□□ 0.39
PCNA-201ENST00000379143 KIF1BO60333 1816 aa17.48■□□□□ 0.39
PCNA-201ENST00000379143 CHGAP10645 457 aaKnown RBP17.47■□□□□ 0.39
PCNA-201ENST00000379143 ARHGAP23Q9P227 1491 aa17.47■□□□□ 0.39
PCNA-201ENST00000379143 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms