RNA–Protein interactions for RNA: ENST00000377595.7

UCHL3-201, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UCHL3, Length 844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-201ENST00000377595 MAP3K1Q13233 1512 aa23.97■■□□□ 1.43
UCHL3-201ENST00000377595 ARHGEF5Q12774 1597 aa23.95■■□□□ 1.43
UCHL3-201ENST00000377595 TNRQ92752 1358 aa23.95■■□□□ 1.42
UCHL3-201ENST00000377595 MYOM3Q5VTT5 1437 aa23.93■■□□□ 1.42
UCHL3-201ENST00000377595 MIA2Q96PC5 1412 aa23.93■■□□□ 1.42
UCHL3-201ENST00000377595 ZNF335Q9H4Z2 1342 aaPredicted RBP23.93■■□□□ 1.42
UCHL3-201ENST00000377595 CEP170BQ9Y4F5 1589 aaPredicted RBP23.91■■□□□ 1.42
UCHL3-201ENST00000377595 A2ML1A8K2U0 1454 aa23.91■■□□□ 1.42
UCHL3-201ENST00000377595 PLA2R1Q13018 1463 aa23.91■■□□□ 1.42
UCHL3-201ENST00000377595 THEMISQ8N1K5 641 aaPredicted RBP23.9■■□□□ 1.42
UCHL3-201ENST00000377595 LTBP4Q8N2S1 1624 aa23.9■■□□□ 1.42
UCHL3-201ENST00000377595 MYO3AQ8NEV4 1616 aa23.89■■□□□ 1.42
UCHL3-201ENST00000377595 KDM5DQ9BY66 1539 aa23.89■■□□□ 1.41
UCHL3-201ENST00000377595 PZPP20742 1482 aa23.88■■□□□ 1.41
UCHL3-201ENST00000377595 ANKLE2Q86XL3 938 aa23.88■■□□□ 1.41
UCHL3-201ENST00000377595 RRP7BPQ9NSQ0 103 aa23.88■■□□□ 1.41
UCHL3-201ENST00000377595 TCOF1Q13428 1488 aaKnown RBP23.87■■□□□ 1.41
UCHL3-201ENST00000377595 ZNF142P52746 1687 aaPredicted RBP23.83■■□□□ 1.41
UCHL3-201ENST00000377595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.83■■□□□ 1.41
UCHL3-201ENST00000377595 UBAP1LF5GYI3 381 aa23.83■■□□□ 1.41
UCHL3-201ENST00000377595 FAM135AQ9P2D6 1515 aa23.83■■□□□ 1.41
UCHL3-201ENST00000377595 DNMT1P26358 1616 aaKnown RBP23.82■■□□□ 1.4
UCHL3-201ENST00000377595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.81■■□□□ 1.47e-7■■□□□ 12.5
UCHL3-201ENST00000377595 CHIC2Q9UKJ5 165 aa23.81■■□□□ 1.4
UCHL3-201ENST00000377595 MAST1Q9Y2H9 1570 aa23.81■■□□□ 1.4
UCHL3-201ENST00000377595 ABCC5O15440 1437 aa23.8■■□□□ 1.4
UCHL3-201ENST00000377595 IQSEC2Q5JU85 1478 aa23.8■■□□□ 1.4
UCHL3-201ENST00000377595 KIF15Q9NS87 1388 aa23.78■■□□□ 1.4
UCHL3-201ENST00000377595 NLRP1Q9C000 1473 aa23.77■■□□□ 1.4
UCHL3-201ENST00000377595 ABCC3O15438 1527 aa23.75■■□□□ 1.39
UCHL3-201ENST00000377595 DUOX2Q9NRD8 1548 aa23.75■■□□□ 1.39
UCHL3-201ENST00000377595 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
UCHL3-201ENST00000377595 DISP3Q9P2K9 1392 aa23.73■■□□□ 1.39
UCHL3-201ENST00000377595 FGD6Q6ZV73 1430 aa23.73■■□□□ 1.39
UCHL3-201ENST00000377595 DAPK1P53355 1430 aa23.72■■□□□ 1.39
UCHL3-201ENST00000377595 RNF17Q9BXT8 1623 aaKnown RBP23.71■■□□□ 1.39
UCHL3-201ENST00000377595 PTPN23Q9H3S7 1636 aa23.71■■□□□ 1.39
UCHL3-201ENST00000377595 FAM50AQ14320 339 aaKnown RBP23.71■■□□□ 1.39
UCHL3-201ENST00000377595 ANKRD30AQ9BXX3 1397 aa23.69■■□□□ 1.38
UCHL3-201ENST00000377595 EIF2AK4Q9P2K8 1649 aaKnown RBP23.69■■□□□ 1.38
UCHL3-201ENST00000377595 ERVK-7P63135 1459 aa23.68■■□□□ 1.38
UCHL3-201ENST00000377595 NPHP4O75161 1426 aaPredicted RBP23.68■■□□□ 1.38
UCHL3-201ENST00000377595 SHANK2Q9UPX8 1470 aa23.68■■□□□ 1.38
UCHL3-201ENST00000377595 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
UCHL3-201ENST00000377595 KANK1Q14678 1352 aa23.67■■□□□ 1.38
UCHL3-201ENST00000377595 SCAF1Q9H7N4 1312 aaKnown RBP23.67■■□□□ 1.38
UCHL3-201ENST00000377595 TOM1O60784 492 aa23.66■■□□□ 1.38
UCHL3-201ENST00000377595 PIP4K2BP78356 416 aa23.66■■□□□ 1.38
UCHL3-201ENST00000377595 SPATA31D1Q6ZQQ2 1576 aa23.65■■□□□ 1.38
UCHL3-201ENST00000377595 TXNDC2Q86VQ3 553 aa23.65■■□□□ 1.38
UCHL3-201ENST00000377595 MROH1Q8NDA8 1641 aa23.65■■□□□ 1.38
UCHL3-201ENST00000377595 NEURL4Q96JN8 1562 aa23.65■■□□□ 1.38
UCHL3-201ENST00000377595 STAG3Q9UJ98 1225 aa23.64■■□□□ 1.37
UCHL3-201ENST00000377595 ZC3H13Q5T200 1668 aaKnown RBP23.63■■□□□ 1.37
UCHL3-201ENST00000377595 MED14O60244 1454 aa23.62■■□□□ 1.37
UCHL3-201ENST00000377595 ARHGAP31Q2M1Z3 1444 aa23.62■■□□□ 1.37
UCHL3-201ENST00000377595 LTKP29376 864 aa23.62■■□□□ 1.37
UCHL3-201ENST00000377595 ILDR2Q71H61 639 aa23.61■■□□□ 1.37
UCHL3-201ENST00000377595 EID1Q9Y6B2 187 aa23.61■■□□□ 1.37
UCHL3-201ENST00000377595 CPS1P31327 1500 aa23.59■■□□□ 1.37
UCHL3-201ENST00000377595 IDI1Q13907 227 aa23.58■■□□□ 1.37
UCHL3-201ENST00000377595 POLR1AO95602 1720 aaPredicted RBP23.58■■□□□ 1.37
UCHL3-201ENST00000377595 CEP152O94986 1710 aa23.57■■□□□ 1.36
UCHL3-201ENST00000377595 DEPDC5O75140 1603 aa23.56■■□□□ 1.36
UCHL3-201ENST00000377595 PRDM15P57071 1507 aaPredicted RBP23.55■■□□□ 1.36
UCHL3-201ENST00000377595 CROCC2H7BZ55 1655 aa23.55■■□□□ 1.36
UCHL3-201ENST00000377595 HSPA1LP34931 641 aa23.55■■□□□ 1.36
UCHL3-201ENST00000377595 CFAP65Q6ZU64 1925 aaKnown RBP23.55■■□□□ 1.36
UCHL3-201ENST00000377595 VWDEQ8N2E2 1590 aa23.54■■□□□ 1.36
UCHL3-201ENST00000377595 SCAF11Q99590 1463 aaKnown RBP23.52■■□□□ 1.36
UCHL3-201ENST00000377595 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
UCHL3-201ENST00000377595 TMEM2Q9UHN6 1383 aa23.5■■□□□ 1.35
UCHL3-201ENST00000377595 IQGAP1P46940 1657 aa23.49■■□□□ 1.35
UCHL3-201ENST00000377595 ANKRD50Q9ULJ7 1429 aa23.49■■□□□ 1.35
UCHL3-201ENST00000377595 SLC52A1Q9NWF4 448 aa23.48■■□□□ 1.35
UCHL3-201ENST00000377595 ADGRL2O95490 1459 aa23.48■■□□□ 1.35
UCHL3-201ENST00000377595 ARHGAP23Q9P227 1491 aa23.48■■□□□ 1.35
UCHL3-201ENST00000377595 LMTK2Q8IWU2 1503 aa23.47■■□□□ 1.35
UCHL3-201ENST00000377595 UBR1Q8IWV7 1749 aa23.47■■□□□ 1.35
UCHL3-201ENST00000377595 SLIT1O75093 1534 aa23.46■■□□□ 1.35
UCHL3-201ENST00000377595 ITGAEP38570 1179 aa23.46■■□□□ 1.35
UCHL3-201ENST00000377595 BCANQ96GW7 911 aa23.46■■□□□ 1.35
UCHL3-201ENST00000377595 LRRC7Q96NW7 1537 aa23.44■■□□□ 1.34
UCHL3-201ENST00000377595 SOCS7O14512 581 aa23.44■■□□□ 1.34
UCHL3-201ENST00000377595 SLC26A8Q96RN1 970 aa23.44■■□□□ 1.34
UCHL3-201ENST00000377595 NOS1P29475 1434 aa23.42■■□□□ 1.34
UCHL3-201ENST00000377595 PIK3C2BO00750 1634 aa23.41■■□□□ 1.34
UCHL3-201ENST00000377595 EFCAB6Q5THR3 1501 aa23.38■■□□□ 1.33
UCHL3-201ENST00000377595 CHGAP10645 457 aaKnown RBP23.38■■□□□ 1.33
UCHL3-201ENST00000377595 KCNA6P17658 529 aa23.38■■□□□ 1.33
UCHL3-201ENST00000377595 HDGFP51858 240 aaKnown RBP23.38■■□□□ 1.33
UCHL3-201ENST00000377595 PROSER2Q86WR7 435 aaPredicted RBP23.37■■□□□ 1.33
UCHL3-201ENST00000377595 STRCP1A6NGW2 1772 aa23.35■■□□□ 1.33
UCHL3-201ENST00000377595 PPP1R15AO75807 674 aaPredicted RBP23.35■■□□□ 1.33
UCHL3-201ENST00000377595 ROCK1Q13464 1354 aa23.35■■□□□ 1.33
UCHL3-201ENST00000377595 SYNMO15061 1565 aa23.35■■□□□ 1.33
UCHL3-201ENST00000377595 RBM33Q96EV2 1170 aaKnown RBP23.34■■□□□ 1.33
UCHL3-201ENST00000377595 RPRD2Q5VT52 1461 aaKnown RBP23.33■■□□□ 1.33
UCHL3-201ENST00000377595 NUP155O75694 1391 aa23.31■■□□□ 1.32
UCHL3-201ENST00000377595 ALKQ9UM73 1620 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms