RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 UNC13BO14795 1591 aa29.19■■■□□ 2.26
AUP1-201ENST00000377526 ARID4BQ4LE39 1312 aaPredicted RBP29.17■■■□□ 2.26
AUP1-201ENST00000377526 PRDM15P57071 1507 aaPredicted RBP29.15■■■□□ 2.26
AUP1-201ENST00000377526 GGT6Q6P531 493 aa29.12■■■□□ 2.25
AUP1-201ENST00000377526 MLECQ14165 292 aa29.11■■■□□ 2.25
AUP1-201ENST00000377526 HRCP23327 699 aa29.09■■■□□ 2.25
AUP1-201ENST00000377526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.09■■■□□ 2.251e-8■■□□□ 12.2
AUP1-201ENST00000377526 VWDEQ8N2E2 1590 aa29.09■■■□□ 2.25
AUP1-201ENST00000377526 KDM5DQ9BY66 1539 aa29.08■■■□□ 2.25
AUP1-201ENST00000377526 IQGAP3Q86VI3 1631 aa29.07■■■□□ 2.24
AUP1-201ENST00000377526 CEP152O94986 1710 aa29.05■■■□□ 2.24
AUP1-201ENST00000377526 NUP155O75694 1391 aa29.05■■■□□ 2.24
AUP1-201ENST00000377526 TRIM52Q96A61 297 aa29.05■■■□□ 2.24
AUP1-201ENST00000377526 ABCC3O15438 1527 aa29.03■■■□□ 2.24
AUP1-201ENST00000377526 PZPP20742 1482 aa29.02■■■□□ 2.24
AUP1-201ENST00000377526 FAM135AQ9P2D6 1515 aa29.02■■■□□ 2.24
AUP1-201ENST00000377526 KANK1Q14678 1352 aa29.02■■■□□ 2.24
AUP1-201ENST00000377526 ADAMTSL3P82987 1691 aa29.01■■■□□ 2.23
AUP1-201ENST00000377526 ZC3H13Q5T200 1668 aaKnown RBP29.01■■■□□ 2.23
AUP1-201ENST00000377526 CLTCQ00610 1675 aaKnown RBP29.01■■■□□ 2.23
AUP1-201ENST00000377526 FER1L4A9Z1Z3 1794 aa29■■■□□ 2.23
AUP1-201ENST00000377526 LMTK2Q8IWU2 1503 aa28.99■■■□□ 2.23
AUP1-201ENST00000377526 MADDQ8WXG6 1647 aa28.98■■■□□ 2.23
AUP1-201ENST00000377526 ACIN1Q9UKV3 1341 aaKnown RBP28.98■■■□□ 2.23
AUP1-201ENST00000377526 PPP6R1Q9UPN7 881 aa28.97■■■□□ 2.23
AUP1-201ENST00000377526 WASHC2CQ9Y4E1 1318 aa28.97■■■□□ 2.23
AUP1-201ENST00000377526 TET3O43151 1660 aa28.96■■■□□ 2.23
AUP1-201ENST00000377526 CAMSAP1Q5T5Y3 1602 aa28.95■■■□□ 2.23
AUP1-201ENST00000377526 EFCAB6Q5THR3 1501 aa28.92■■■□□ 2.22
AUP1-201ENST00000377526 RIMS1Q86UR5 1692 aaKnown RBP28.91■■■□□ 2.22
AUP1-201ENST00000377526 MROH2AA6NES4 1674 aa28.91■■■□□ 2.22
AUP1-201ENST00000377526 MPHOSPH9Q99550 1183 aa28.9■■■□□ 2.22
AUP1-201ENST00000377526 SLC4A1APQ9BWU0 796 aaKnown RBP28.9■■■□□ 2.22
AUP1-201ENST00000377526 CNTLNQ9NXG0 1405 aa28.9■■■□□ 2.22
AUP1-201ENST00000377526 E9PCH4 1651 aa28.9■■■□□ 2.22
AUP1-201ENST00000377526 ESF1Q9H501 851 aaKnown RBP28.88■■■□□ 2.21
AUP1-201ENST00000377526 DHX57Q6P158 1386 aaKnown RBP28.86■■■□□ 2.21
AUP1-201ENST00000377526 NPATQ14207 1427 aa28.84■■■□□ 2.21
AUP1-201ENST00000377526 C3P01024 1663 aa28.84■■■□□ 2.21
AUP1-201ENST00000377526 ARHGAP31Q2M1Z3 1444 aa28.84■■■□□ 2.21
AUP1-201ENST00000377526 PKD2Q13563 968 aa28.83■■■□□ 2.21
AUP1-201ENST00000377526 ZMYM3Q14202 1370 aa28.83■■■□□ 2.21
AUP1-201ENST00000377526 KDM4FA0A1W2PPD8 638 aa28.81■■■□□ 2.2
AUP1-201ENST00000377526 FOXD1Q16676 465 aa28.81■■■□□ 2.2
AUP1-201ENST00000377526 CFAP65Q6ZU64 1925 aaKnown RBP28.8■■■□□ 2.2
AUP1-201ENST00000377526 RPRD2Q5VT52 1461 aaKnown RBP28.79■■■□□ 2.2
AUP1-201ENST00000377526 PREX1Q8TCU6 1659 aa28.77■■■□□ 2.2
AUP1-201ENST00000377526 PTPRMP28827 1452 aa28.75■■■□□ 2.19
AUP1-201ENST00000377526 CEBPAP49715 358 aaPredicted RBP28.75■■■□□ 2.19
AUP1-201ENST00000377526 SPHKAPQ2M3C7 1700 aa28.74■■■□□ 2.19
AUP1-201ENST00000377526 FBXO31Q5XUX0 539 aaPredicted RBP28.74■■■□□ 2.19
AUP1-201ENST00000377526 ERVK-7P63135 1459 aa28.73■■■□□ 2.19
AUP1-201ENST00000377526 SPATA31D1Q6ZQQ2 1576 aa28.72■■■□□ 2.19
AUP1-201ENST00000377526 PLA2R1Q13018 1463 aa28.71■■■□□ 2.19
AUP1-201ENST00000377526 NOS1P29475 1434 aa28.71■■■□□ 2.19
AUP1-201ENST00000377526 PTPRTO14522 1441 aa28.7■■■□□ 2.18
AUP1-201ENST00000377526 PLPPR3Q6T4P5 718 aa28.7■■■□□ 2.18
AUP1-201ENST00000377526 SYNMO15061 1565 aa28.7■■■□□ 2.18
AUP1-201ENST00000377526 TRPM2O94759 1503 aa28.68■■■□□ 2.18
AUP1-201ENST00000377526 ANKRD30BQ9BXX2 1392 aa28.67■■■□□ 2.18
AUP1-201ENST00000377526 UGGT1Q9NYU2 1555 aa28.64■■■□□ 2.18
AUP1-201ENST00000377526 CLTCL1P53675 1640 aa28.62■■■□□ 2.17
AUP1-201ENST00000377526 CCER1Q8TC90 406 aaPredicted RBP28.61■■■□□ 2.17
AUP1-201ENST00000377526 PIK3C2BO00750 1634 aa28.61■■■□□ 2.17
AUP1-201ENST00000377526 TNRQ92752 1358 aa28.61■■■□□ 2.17
AUP1-201ENST00000377526 MYO3AQ8NEV4 1616 aa28.55■■■□□ 2.16
AUP1-201ENST00000377526 CCDC144AA2RUR9 1427 aa28.55■■■□□ 2.16
AUP1-201ENST00000377526 IDI1Q13907 227 aa28.51■■■□□ 2.16
AUP1-201ENST00000377526 SIN3AQ96ST3 1273 aa28.51■■■□□ 2.16
AUP1-201ENST00000377526 SETD1BQ9UPS6 1966 aaKnown RBP28.51■■■□□ 2.15
AUP1-201ENST00000377526 CLSPNQ9HAW4 1339 aa28.51■■■□□ 2.15
AUP1-201ENST00000377526 SLC52A1Q9NWF4 448 aa28.51■■■□□ 2.15
AUP1-201ENST00000377526 NLRP1Q9C000 1473 aa28.5■■■□□ 2.15
AUP1-201ENST00000377526 KIF1BO60333 1816 aa28.48■■■□□ 2.15
AUP1-201ENST00000377526 ZNF142P52746 1687 aaPredicted RBP28.46■■■□□ 2.15
AUP1-201ENST00000377526 MYO5BQ9ULV0 1848 aa28.46■■■□□ 2.15
AUP1-201ENST00000377526 ADGRB3O60242 1522 aa28.45■■■□□ 2.15
AUP1-201ENST00000377526 TMEM131LA2VDJ0 1609 aa28.45■■■□□ 2.15
AUP1-201ENST00000377526 CEP170BQ9Y4F5 1589 aaPredicted RBP28.45■■■□□ 2.14
AUP1-201ENST00000377526 UBR1Q8IWV7 1749 aa28.44■■■□□ 2.14
AUP1-201ENST00000377526 A2ML1A8K2U0 1454 aa28.43■■■□□ 2.14
AUP1-201ENST00000377526 NEUROD1Q13562 356 aa28.43■■■□□ 2.14
AUP1-201ENST00000377526 SPATA31E1Q6ZUB1 1445 aa28.42■■■□□ 2.14
AUP1-201ENST00000377526 KDM5AP29375 1690 aaKnown RBP28.41■■■□□ 2.14
AUP1-201ENST00000377526 UHRF1BP1Q6BDS2 1440 aa28.41■■■□□ 2.14
AUP1-201ENST00000377526 CHGAP10645 457 aaKnown RBP28.39■■■□□ 2.14
AUP1-201ENST00000377526 NEURL4Q96JN8 1562 aa28.39■■■□□ 2.14
AUP1-201ENST00000377526 STAG3Q9UJ98 1225 aa28.34■■■□□ 2.13
AUP1-201ENST00000377526 RGL3Q3MIN7 710 aa28.32■■■□□ 2.12
AUP1-201ENST00000377526 LMTK3Q96Q04 1460 aa28.31■■■□□ 2.12
AUP1-201ENST00000377526 IFT172Q9UG01 1749 aa28.29■■■□□ 2.12
AUP1-201ENST00000377526 NEXMIFQ5QGS0 1516 aa28.29■■■□□ 2.12
AUP1-201ENST00000377526 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
AUP1-201ENST00000377526 PPLO60437 1756 aa28.27■■■□□ 2.12
AUP1-201ENST00000377526 TONSLQ96HA7 1378 aa28.26■■■□□ 2.11
AUP1-201ENST00000377526 SLIT1O75093 1534 aa28.26■■■□□ 2.11
AUP1-201ENST00000377526 THEMISQ8N1K5 641 aaPredicted RBP28.26■■■□□ 2.11
AUP1-201ENST00000377526 TMEM2Q9UHN6 1383 aa28.25■■■□□ 2.11
AUP1-201ENST00000377526 ARHGAP23Q9P227 1491 aa28.25■■■□□ 2.11
AUP1-201ENST00000377526 ZFYVE9O95405 1425 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms