RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
SF1-205ENST00000377394 HNRNPMP52272 730 aaKnown RBP eCLIP18.73■□□□□ 0.59
SF1-205ENST00000377394 CARD11Q9BXL7 1154 aa18.72■□□□□ 0.59
SF1-205ENST00000377394 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.71■□□□□ 0.59
SF1-205ENST00000377394 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
SF1-205ENST00000377394 PNISRQ8TF01 805 aaKnown RBP18.68■□□□□ 0.58
SF1-205ENST00000377394 SAMD9LQ8IVG5 1584 aa18.68■□□□□ 0.58
SF1-205ENST00000377394 ST20-MTHFSA0A0A6YYL1 179 aa18.67■□□□□ 0.58
SF1-205ENST00000377394 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
SF1-205ENST00000377394 CCDC141Q6ZP82 1450 aa18.67■□□□□ 0.58
SF1-205ENST00000377394 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
SF1-205ENST00000377394 NUDCQ9Y266 331 aa18.67■□□□□ 0.58
SF1-205ENST00000377394 RNF123Q5XPI4 1314 aa18.66■□□□□ 0.58
SF1-205ENST00000377394 CDC42BPBQ9Y5S2 1711 aa18.66■□□□□ 0.58
SF1-205ENST00000377394 RTL5Q5HYW3 569 aaPredicted RBP18.66■□□□□ 0.58
SF1-205ENST00000377394 FAM135AQ9P2D6 1515 aa18.65■□□□□ 0.58
SF1-205ENST00000377394 PREX2Q70Z35 1606 aa18.65■□□□□ 0.58
SF1-205ENST00000377394 TMC1Q8TDI8 760 aa18.62■□□□□ 0.57
SF1-205ENST00000377394 RSPH4AQ5TD94 716 aa18.62■□□□□ 0.57
SF1-205ENST00000377394 E9PCH4 1651 aa18.62■□□□□ 0.57
SF1-205ENST00000377394 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
SF1-205ENST00000377394 KTN1Q86UP2 1357 aaKnown RBP18.6■□□□□ 0.57
SF1-205ENST00000377394 IPO9Q96P70 1041 aaKnown RBP18.6■□□□□ 0.57
SF1-205ENST00000377394 PRAG1Q86YV5 1406 aa18.59■□□□□ 0.57
SF1-205ENST00000377394 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
SF1-205ENST00000377394 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.57
SF1-205ENST00000377394 RALBP1Q15311 655 aa18.58■□□□□ 0.57
SF1-205ENST00000377394 TRPM1Q7Z4N2 1603 aa18.58■□□□□ 0.57
SF1-205ENST00000377394 PLA2R1Q13018 1463 aa18.58■□□□□ 0.57
SF1-205ENST00000377394 MAST1Q9Y2H9 1570 aa18.58■□□□□ 0.56
SF1-205ENST00000377394 ZBTB47Q9UFB7 747 aaPredicted RBP18.57■□□□□ 0.56
SF1-205ENST00000377394 SYCP2Q9BX26 1530 aa18.57■□□□□ 0.56
SF1-205ENST00000377394 UNC13BO14795 1591 aa18.57■□□□□ 0.56
SF1-205ENST00000377394 CCDC144AA2RUR9 1427 aa18.57■□□□□ 0.56
SF1-205ENST00000377394 ANP32AP39687 249 aaKnown RBP18.57■□□□□ 0.56
SF1-205ENST00000377394 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
SF1-205ENST00000377394 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
SF1-205ENST00000377394 GPRASP1Q5JY77 1395 aa18.54■□□□□ 0.56
SF1-205ENST00000377394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.54■□□□□ 0.566e-7■■■□□ 15.3
SF1-205ENST00000377394 ARHGAP5Q13017 1502 aa18.53■□□□□ 0.56
SF1-205ENST00000377394 A2MP01023 1474 aa18.53■□□□□ 0.56
SF1-205ENST00000377394 NBPF1Q3BBV0 1214 aa18.52■□□□□ 0.56
SF1-205ENST00000377394 PARD3Q8TEW0 1356 aa18.52■□□□□ 0.55
SF1-205ENST00000377394 PLXNC1O60486 1568 aa18.5■□□□□ 0.55
SF1-205ENST00000377394 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
SF1-205ENST00000377394 IQGAP3Q86VI3 1631 aa18.5■□□□□ 0.55
SF1-205ENST00000377394 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
SF1-205ENST00000377394 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
SF1-205ENST00000377394 PLEKHH2Q8IVE3 1493 aa18.49■□□□□ 0.55
SF1-205ENST00000377394 LAMC1P11047 1609 aa18.49■□□□□ 0.55
SF1-205ENST00000377394 CHD1O14646 1710 aa18.48■□□□□ 0.55
SF1-205ENST00000377394 UBE2Q2Q8WVN8 375 aa18.48■□□□□ 0.55
SF1-205ENST00000377394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.554e-9■■■□□ 19.2
SF1-205ENST00000377394 PRDM15P57071 1507 aaPredicted RBP18.48■□□□□ 0.55
SF1-205ENST00000377394 NLRP13Q86W25 1043 aa18.48■□□□□ 0.55
SF1-205ENST00000377394 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
SF1-205ENST00000377394 COL17A1Q9UMD9 1497 aaPredicted RBP18.47■□□□□ 0.55
SF1-205ENST00000377394 TESK2Q96S53 571 aa18.47■□□□□ 0.55
SF1-205ENST00000377394 ATP10AO60312 1499 aa18.46■□□□□ 0.55
SF1-205ENST00000377394 MAGI2Q86UL8 1455 aa18.45■□□□□ 0.54
SF1-205ENST00000377394 MYO5CQ9NQX4 1742 aa18.45■□□□□ 0.54
SF1-205ENST00000377394 ABCC2Q92887 1545 aa18.45■□□□□ 0.54
SF1-205ENST00000377394 NPM2Q86SE8 214 aaKnown RBP18.45■□□□□ 0.54
SF1-205ENST00000377394 DISP3Q9P2K9 1392 aa18.45■□□□□ 0.54
SF1-205ENST00000377394 DUOX2Q9NRD8 1548 aa18.45■□□□□ 0.54
SF1-205ENST00000377394 ERCC6L2Q5T890 1561 aa18.43■□□□□ 0.54
SF1-205ENST00000377394 NEFMP07197 916 aa18.43■□□□□ 0.54
SF1-205ENST00000377394 EIF2AK4Q9P2K8 1649 aaKnown RBP18.42■□□□□ 0.54
SF1-205ENST00000377394 ERBINQ96RT1 1412 aa18.42■□□□□ 0.54
SF1-205ENST00000377394 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
SF1-205ENST00000377394 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
SF1-205ENST00000377394 BRPF3Q9ULD4 1205 aa18.4■□□□□ 0.54
SF1-205ENST00000377394 PLCH2O75038 1416 aa18.39■□□□□ 0.53
SF1-205ENST00000377394 PDE3BQ13370 1112 aa18.39■□□□□ 0.53
SF1-205ENST00000377394 PANK3Q9H999 370 aa18.38■□□□□ 0.53
SF1-205ENST00000377394 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
SF1-205ENST00000377394 INSRP06213 1382 aa18.37■□□□□ 0.53
SF1-205ENST00000377394 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
SF1-205ENST00000377394 EIF5BO60841 1220 aaKnown RBP18.36■□□□□ 0.53
SF1-205ENST00000377394 CC2D1BQ5T0F9 858 aaKnown RBP18.36■□□□□ 0.53
SF1-205ENST00000377394 ZMYM4Q5VZL5 1548 aa18.35■□□□□ 0.53
SF1-205ENST00000377394 BLMP54132 1417 aaPredicted RBP18.35■□□□□ 0.53
SF1-205ENST00000377394 TMF1P82094 1093 aa18.35■□□□□ 0.53
SF1-205ENST00000377394 ABCC1P33527 1531 aa18.34■□□□□ 0.53
SF1-205ENST00000377394 EXOC6Q8TAG9 804 aa18.34■□□□□ 0.53
SF1-205ENST00000377394 TRAPPC8Q9Y2L5 1435 aa18.34■□□□□ 0.53
SF1-205ENST00000377394 EFCAB2Q5VUJ9 269 aa18.33■□□□□ 0.53
SF1-205ENST00000377394 CDCA7LQ96GN5 454 aa18.33■□□□□ 0.52
SF1-205ENST00000377394 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
SF1-205ENST00000377394 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
SF1-205ENST00000377394 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
SF1-205ENST00000377394 WDR7Q9Y4E6 1490 aa18.29■□□□□ 0.52
SF1-205ENST00000377394 IQGAP1P46940 1657 aa18.27■□□□□ 0.52
SF1-205ENST00000377394 USP35Q9P2H5 1018 aa18.27■□□□□ 0.51
SF1-205ENST00000377394 TRPM2O94759 1503 aa18.26■□□□□ 0.51
SF1-205ENST00000377394 RTEL1-TNFRSF6BF6WH68 1400 aa18.26■□□□□ 0.51
SF1-205ENST00000377394 PTPRTO14522 1441 aa18.25■□□□□ 0.51
SF1-205ENST00000377394 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
SF1-205ENST00000377394 ZFYVE16Q7Z3T8 1539 aa18.24■□□□□ 0.51
SF1-205ENST00000377394 CLASP1Q7Z460 1538 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms