RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 SAMD9LQ8IVG5 1584 aa21.93■■□□□ 1.1
TRIM27-202ENST00000377199 FAM135AQ9P2D6 1515 aa21.92■■□□□ 1.1
TRIM27-202ENST00000377199 ERICH6BQ5W0A0 696 aa21.92■■□□□ 1.1
TRIM27-202ENST00000377199 ERICH6Q7L0X2 663 aa21.92■■□□□ 1.1
TRIM27-202ENST00000377199 ARID4BQ4LE39 1312 aaPredicted RBP21.91■■□□□ 1.1
TRIM27-202ENST00000377199 CCDC136Q96JN2 1154 aa21.9■■□□□ 1.1
TRIM27-202ENST00000377199 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
TRIM27-202ENST00000377199 SMG6Q86US8 1419 aaKnown RBP21.88■■□□□ 1.09
TRIM27-202ENST00000377199 CDC42BPBQ9Y5S2 1711 aa21.87■■□□□ 1.09
TRIM27-202ENST00000377199 PLEKHH2Q8IVE3 1493 aa21.87■■□□□ 1.09
TRIM27-202ENST00000377199 RSPH4AQ5TD94 716 aa21.86■■□□□ 1.09
TRIM27-202ENST00000377199 ARHGEF12Q9NZN5 1544 aa21.86■■□□□ 1.09
TRIM27-202ENST00000377199 MYT1LQ9UL68 1186 aa21.85■■□□□ 1.09
TRIM27-202ENST00000377199 TTC37Q6PGP7 1564 aa21.85■■□□□ 1.09
TRIM27-202ENST00000377199 ERCC6L2Q5T890 1561 aa21.84■■□□□ 1.09
TRIM27-202ENST00000377199 RALBP1Q15311 655 aa21.83■■□□□ 1.09
TRIM27-202ENST00000377199 ARHGEF5Q12774 1597 aa21.83■■□□□ 1.09
TRIM27-202ENST00000377199 KDM5DQ9BY66 1539 aa21.83■■□□□ 1.08
TRIM27-202ENST00000377199 PRAG1Q86YV5 1406 aa21.82■■□□□ 1.08
TRIM27-202ENST00000377199 PREX2Q70Z35 1606 aa21.81■■□□□ 1.08
TRIM27-202ENST00000377199 KTN1Q86UP2 1357 aaKnown RBP21.81■■□□□ 1.08
TRIM27-202ENST00000377199 PLA2R1Q13018 1463 aa21.8■■□□□ 1.08
TRIM27-202ENST00000377199 PANK3Q9H999 370 aa21.8■■□□□ 1.08
TRIM27-202ENST00000377199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.8■■□□□ 1.087e-11■■■■■ 38.2
TRIM27-202ENST00000377199 FANCIQ9NVI1 1328 aa21.79■■□□□ 1.08
TRIM27-202ENST00000377199 CHD1O14646 1710 aa21.79■■□□□ 1.08
TRIM27-202ENST00000377199 DISP3Q9P2K9 1392 aa21.79■■□□□ 1.08
TRIM27-202ENST00000377199 NLRP13Q86W25 1043 aa21.78■■□□□ 1.08
TRIM27-202ENST00000377199 AFAP1Q8N556 730 aa21.78■■□□□ 1.08
TRIM27-202ENST00000377199 A2MP01023 1474 aa21.78■■□□□ 1.08
TRIM27-202ENST00000377199 BRD4O60885 1362 aaPredicted RBP21.77■■□□□ 1.08
TRIM27-202ENST00000377199 CDCA7LQ96GN5 454 aa21.76■■□□□ 1.07
TRIM27-202ENST00000377199 EFCAB2Q5VUJ9 269 aa21.75■■□□□ 1.07
TRIM27-202ENST00000377199 TESK2Q96S53 571 aa21.74■■□□□ 1.07
TRIM27-202ENST00000377199 PER1O15534 1290 aaPredicted RBP21.73■■□□□ 1.07
TRIM27-202ENST00000377199 TMF1P82094 1093 aa21.72■■□□□ 1.07
TRIM27-202ENST00000377199 LRPPRCP42704 1394 aaKnown RBP21.72■■□□□ 1.07
TRIM27-202ENST00000377199 EXOC6Q8TAG9 804 aa21.72■■□□□ 1.07
TRIM27-202ENST00000377199 RCAN3Q9UKA8 241 aa21.71■■□□□ 1.07
TRIM27-202ENST00000377199 PLIN1O60240 522 aa21.69■■□□□ 1.06
TRIM27-202ENST00000377199 TRPM1Q7Z4N2 1603 aa21.69■■□□□ 1.06
TRIM27-202ENST00000377199 TRAPPC8Q9Y2L5 1435 aa21.69■■□□□ 1.06
TRIM27-202ENST00000377199 SPAG9O60271 1321 aaKnown RBP21.68■■□□□ 1.06
TRIM27-202ENST00000377199 RRP1P56182 461 aaKnown RBP21.68■■□□□ 1.06
TRIM27-202ENST00000377199 PARD3Q8TEW0 1356 aa21.68■■□□□ 1.06
TRIM27-202ENST00000377199 RNF123Q5XPI4 1314 aa21.68■■□□□ 1.06
TRIM27-202ENST00000377199 ERBINQ96RT1 1412 aa21.67■■□□□ 1.06
TRIM27-202ENST00000377199 ABCC2Q92887 1545 aa21.67■■□□□ 1.06
TRIM27-202ENST00000377199 MYO5CQ9NQX4 1742 aa21.64■■□□□ 1.06
TRIM27-202ENST00000377199 COL17A1Q9UMD9 1497 aaPredicted RBP21.63■■□□□ 1.05
TRIM27-202ENST00000377199 PLCH2O75038 1416 aa21.62■■□□□ 1.05
TRIM27-202ENST00000377199 UNC13BO14795 1591 aa21.62■■□□□ 1.05
TRIM27-202ENST00000377199 GPRASP1Q5JY77 1395 aa21.62■■□□□ 1.05
TRIM27-202ENST00000377199 NPM2Q86SE8 214 aaKnown RBP21.62■■□□□ 1.05
TRIM27-202ENST00000377199 KNSTRNQ9Y448 316 aa21.62■■□□□ 1.05
TRIM27-202ENST00000377199 DUOX2Q9NRD8 1548 aa21.62■■□□□ 1.05
TRIM27-202ENST00000377199 KIF3BO15066 747 aa21.61■■□□□ 1.05
TRIM27-202ENST00000377199 E9PCH4 1651 aa21.6■■□□□ 1.05
TRIM27-202ENST00000377199 NBR1Q14596 966 aa21.6■■□□□ 1.05
TRIM27-202ENST00000377199 ADAMTS8Q9UP79 889 aa21.6■■□□□ 1.05
TRIM27-202ENST00000377199 PAK3O75914 559 aaPredicted RBP21.58■■□□□ 1.05
TRIM27-202ENST00000377199 IQGAP3Q86VI3 1631 aa21.58■■□□□ 1.04
TRIM27-202ENST00000377199 MAST1Q9Y2H9 1570 aa21.58■■□□□ 1.04
TRIM27-202ENST00000377199 SKAP1Q86WV1 359 aa21.57■■□□□ 1.04
TRIM27-202ENST00000377199 PRDM15P57071 1507 aaPredicted RBP21.56■■□□□ 1.04
TRIM27-202ENST00000377199 PLXNC1O60486 1568 aa21.55■■□□□ 1.04
TRIM27-202ENST00000377199 CHGAP10645 457 aaKnown RBP21.55■■□□□ 1.04
TRIM27-202ENST00000377199 WDR43Q15061 677 aaKnown RBP eCLIP21.55■■□□□ 1.04
TRIM27-202ENST00000377199 SHROOM2Q13796 1616 aa21.55■■□□□ 1.04
TRIM27-202ENST00000377199 ZCCHC11Q5TAX3 1644 aaKnown RBP21.54■■□□□ 1.04
TRIM27-202ENST00000377199 ANP32AP39687 249 aaKnown RBP21.54■■□□□ 1.04
TRIM27-202ENST00000377199 NOP58Q9Y2X3 529 aaKnown RBP21.54■■□□□ 1.04
TRIM27-202ENST00000377199 PDE3BQ13370 1112 aa21.52■■□□□ 1.04
TRIM27-202ENST00000377199 CCDC146Q8IYE0 955 aa21.52■■□□□ 1.04
TRIM27-202ENST00000377199 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
TRIM27-202ENST00000377199 PPP2R1AP30153 589 aa21.51■■□□□ 1.03
TRIM27-202ENST00000377199 CFAP70Q5T0N1 1121 aa21.51■■□□□ 1.03
TRIM27-202ENST00000377199 ABCC1P33527 1531 aa21.5■■□□□ 1.03
TRIM27-202ENST00000377199 SCAPERQ9BY12 1400 aa21.5■■□□□ 1.03
TRIM27-202ENST00000377199 CRBNQ96SW2 442 aa21.5■■□□□ 1.03
TRIM27-202ENST00000377199 MAGI2Q86UL8 1455 aa21.49■■□□□ 1.03
TRIM27-202ENST00000377199 WASHC2CQ9Y4E1 1318 aa21.49■■□□□ 1.03
TRIM27-202ENST00000377199 C20orf194Q5TEA3 1177 aa21.48■■□□□ 1.03
TRIM27-202ENST00000377199 EIF2AK4Q9P2K8 1649 aaKnown RBP21.48■■□□□ 1.03
TRIM27-202ENST00000377199 ATP10AO60312 1499 aa21.46■■□□□ 1.03
TRIM27-202ENST00000377199 AMER1Q5JTC6 1135 aaPredicted RBP21.45■■□□□ 1.03
TRIM27-202ENST00000377199 KANK1Q14678 1352 aa21.45■■□□□ 1.02
TRIM27-202ENST00000377199 WDR7Q9Y4E6 1490 aa21.43■■□□□ 1.02
TRIM27-202ENST00000377199 ADGRF5Q8IZF2 1346 aa21.43■■□□□ 1.02
TRIM27-202ENST00000377199 TNNT2P45379 298 aaPredicted RBP21.43■■□□□ 1.02
TRIM27-202ENST00000377199 CDCA8Q53HL2 280 aa21.43■■□□□ 1.02
TRIM27-202ENST00000377199 ZBTB47Q9UFB7 747 aaPredicted RBP21.43■■□□□ 1.02
TRIM27-202ENST00000377199 IPO9Q96P70 1041 aaKnown RBP21.42■■□□□ 1.02
TRIM27-202ENST00000377199 FANCAO15360 1455 aa21.42■■□□□ 1.02
TRIM27-202ENST00000377199 UGGT1Q9NYU2 1555 aa21.42■■□□□ 1.02
TRIM27-202ENST00000377199 PLEKHH1Q9ULM0 1364 aa21.41■■□□□ 1.02
TRIM27-202ENST00000377199 BLMP54132 1417 aaPredicted RBP21.41■■□□□ 1.02
TRIM27-202ENST00000377199 ZFYVE16Q7Z3T8 1539 aa21.4■■□□□ 1.02
TRIM27-202ENST00000377199 SCAF11Q99590 1463 aaKnown RBP21.4■■□□□ 1.02
TRIM27-202ENST00000377199 GGT6Q6P531 493 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms