RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 KDM5CP41229 1560 aa19.18■□□□□ 0.66
CPT1A-202ENST00000376618 TRAPPC8Q9Y2L5 1435 aa19.18■□□□□ 0.66
CPT1A-202ENST00000376618 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
CPT1A-202ENST00000376618 ABCC2Q92887 1545 aa19.15■□□□□ 0.66
CPT1A-202ENST00000376618 ARHGEF5Q12774 1597 aa19.15■□□□□ 0.66
CPT1A-202ENST00000376618 EFCAB2Q5VUJ9 269 aa19.14■□□□□ 0.65
CPT1A-202ENST00000376618 B4GALNT3Q6L9W6 998 aa19.14■□□□□ 0.65
CPT1A-202ENST00000376618 TMC1Q8TDI8 760 aa19.14■□□□□ 0.65
CPT1A-202ENST00000376618 CC2D1BQ5T0F9 858 aaKnown RBP19.13■□□□□ 0.65
CPT1A-202ENST00000376618 RSPH4AQ5TD94 716 aa19.13■□□□□ 0.65
CPT1A-202ENST00000376618 SHROOM2Q13796 1616 aa19.13■□□□□ 0.65
CPT1A-202ENST00000376618 RALGAPBQ86X10 1494 aa19.12■□□□□ 0.65
CPT1A-202ENST00000376618 UHRF1BP1Q6BDS2 1440 aa19.12■□□□□ 0.65
CPT1A-202ENST00000376618 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
CPT1A-202ENST00000376618 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
CPT1A-202ENST00000376618 ZBED9Q6R2W3 1325 aa19.09■□□□□ 0.65
CPT1A-202ENST00000376618 RBM19Q9Y4C8 960 aaKnown RBP19.09■□□□□ 0.65
CPT1A-202ENST00000376618 ZCCHC11Q5TAX3 1644 aaKnown RBP19.09■□□□□ 0.65
CPT1A-202ENST00000376618 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.65
CPT1A-202ENST00000376618 KDM5DQ9BY66 1539 aa19.08■□□□□ 0.65
CPT1A-202ENST00000376618 SPAG9O60271 1321 aaKnown RBP19.08■□□□□ 0.64
CPT1A-202ENST00000376618 PLCH2O75038 1416 aa19.08■□□□□ 0.64
CPT1A-202ENST00000376618 A2MP01023 1474 aa19.08■□□□□ 0.64
CPT1A-202ENST00000376618 PRAG1Q86YV5 1406 aa19.07■□□□□ 0.64
CPT1A-202ENST00000376618 DISP3Q9P2K9 1392 aa19.07■□□□□ 0.64
CPT1A-202ENST00000376618 MYO5CQ9NQX4 1742 aa19.06■□□□□ 0.64
CPT1A-202ENST00000376618 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
CPT1A-202ENST00000376618 KIF3BO15066 747 aa19.04■□□□□ 0.64
CPT1A-202ENST00000376618 TESK2Q96S53 571 aa19.03■□□□□ 0.64
CPT1A-202ENST00000376618 PANK3Q9H999 370 aa19.03■□□□□ 0.64
CPT1A-202ENST00000376618 SCAPERQ9BY12 1400 aa19■□□□□ 0.63
CPT1A-202ENST00000376618 CLASP1Q7Z460 1538 aa18.99■□□□□ 0.63
CPT1A-202ENST00000376618 PER1O15534 1290 aaPredicted RBP18.99■□□□□ 0.63
CPT1A-202ENST00000376618 DUOX2Q9NRD8 1548 aa18.96■□□□□ 0.63
CPT1A-202ENST00000376618 TRPM1Q7Z4N2 1603 aa18.96■□□□□ 0.63
CPT1A-202ENST00000376618 UNC13BO14795 1591 aa18.95■□□□□ 0.62
CPT1A-202ENST00000376618 ARID4BQ4LE39 1312 aaPredicted RBP18.95■□□□□ 0.62
CPT1A-202ENST00000376618 MYBBP1AQ9BQG0 1328 aaKnown RBP18.95■□□□□ 0.62
CPT1A-202ENST00000376618 CDCA7LQ96GN5 454 aa18.95■□□□□ 0.62
CPT1A-202ENST00000376618 ABCC1P33527 1531 aa18.94■□□□□ 0.62
CPT1A-202ENST00000376618 CHGAP10645 457 aaKnown RBP18.94■□□□□ 0.62
CPT1A-202ENST00000376618 PPP4R2Q9NY27 417 aa18.93■□□□□ 0.62
CPT1A-202ENST00000376618 NUDCQ9Y266 331 aa18.93■□□□□ 0.62
CPT1A-202ENST00000376618 MAST1Q9Y2H9 1570 aa18.92■□□□□ 0.62
CPT1A-202ENST00000376618 NUTM2DQ5VT03 806 aaPredicted RBP18.92■□□□□ 0.62
CPT1A-202ENST00000376618 FANCAO15360 1455 aa18.91■□□□□ 0.62
CPT1A-202ENST00000376618 IQGAP3Q86VI3 1631 aa18.91■□□□□ 0.62
CPT1A-202ENST00000376618 UGGT1Q9NYU2 1555 aa18.91■□□□□ 0.62
CPT1A-202ENST00000376618 CFAP70Q5T0N1 1121 aa18.91■□□□□ 0.62
CPT1A-202ENST00000376618 PLXNC1O60486 1568 aa18.9■□□□□ 0.62
CPT1A-202ENST00000376618 CFAP65Q6ZU64 1925 aaKnown RBP18.9■□□□□ 0.62
CPT1A-202ENST00000376618 ERBINQ96RT1 1412 aa18.9■□□□□ 0.62
CPT1A-202ENST00000376618 GGT6Q6P531 493 aa18.9■□□□□ 0.62
CPT1A-202ENST00000376618 TMF1P82094 1093 aa18.89■□□□□ 0.61
CPT1A-202ENST00000376618 RALBP1Q15311 655 aa18.89■□□□□ 0.61
CPT1A-202ENST00000376618 KTN1Q86UP2 1357 aaKnown RBP18.88■□□□□ 0.61
CPT1A-202ENST00000376618 WDR7Q9Y4E6 1490 aa18.88■□□□□ 0.61
CPT1A-202ENST00000376618 E9PCH4 1651 aa18.87■□□□□ 0.61
CPT1A-202ENST00000376618 ASXL2Q76L83 1435 aa18.87■□□□□ 0.61
CPT1A-202ENST00000376618 ADGRF5Q8IZF2 1346 aa18.87■□□□□ 0.61
CPT1A-202ENST00000376618 UHRF1BP1LA0JNW5 1464 aa18.87■□□□□ 0.61
CPT1A-202ENST00000376618 ATP10AO60312 1499 aa18.87■□□□□ 0.61
CPT1A-202ENST00000376618 MSH5O43196 834 aa18.87■□□□□ 0.61
CPT1A-202ENST00000376618 NLRP13Q86W25 1043 aa18.86■□□□□ 0.61
CPT1A-202ENST00000376618 GPRASP1Q5JY77 1395 aa18.86■□□□□ 0.61
CPT1A-202ENST00000376618 ADGRL1O94910 1474 aa18.86■□□□□ 0.61
CPT1A-202ENST00000376618 ZFYVE16Q7Z3T8 1539 aa18.85■□□□□ 0.61
CPT1A-202ENST00000376618 PLIN1O60240 522 aa18.85■□□□□ 0.61
CPT1A-202ENST00000376618 SMG6Q86US8 1419 aaKnown RBP18.85■□□□□ 0.61
CPT1A-202ENST00000376618 RAPGEF3O95398 923 aa18.85■□□□□ 0.61
CPT1A-202ENST00000376618 PARD3Q8TEW0 1356 aa18.84■□□□□ 0.61
CPT1A-202ENST00000376618 BRD4O60885 1362 aaPredicted RBP18.83■□□□□ 0.61
CPT1A-202ENST00000376618 LRPPRCP42704 1394 aaKnown RBP18.83■□□□□ 0.61
CPT1A-202ENST00000376618 MAGI2Q86UL8 1455 aa18.83■□□□□ 0.61
CPT1A-202ENST00000376618 COL17A1Q9UMD9 1497 aaPredicted RBP18.83■□□□□ 0.6
CPT1A-202ENST00000376618 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
CPT1A-202ENST00000376618 PRDM15P57071 1507 aaPredicted RBP18.81■□□□□ 0.6
CPT1A-202ENST00000376618 OSCARQ8IYS5 282 aa18.8■□□□□ 0.6
CPT1A-202ENST00000376618 NPM1P06748 294 aaKnown RBP eCLIP18.8■□□□□ 0.6
CPT1A-202ENST00000376618 TMEM132EQ6IEE7 984 aa18.8■□□□□ 0.6
CPT1A-202ENST00000376618 CCDC136Q96JN2 1154 aa18.8■□□□□ 0.6
CPT1A-202ENST00000376618 CLTCL1P53675 1640 aa18.8■□□□□ 0.6
CPT1A-202ENST00000376618 SKAP1Q86WV1 359 aa18.79■□□□□ 0.6
CPT1A-202ENST00000376618 ATP7AQ04656 1500 aa18.79■□□□□ 0.6
CPT1A-202ENST00000376618 EXOC6Q8TAG9 804 aa18.79■□□□□ 0.6
CPT1A-202ENST00000376618 KNSTRNQ9Y448 316 aa18.79■□□□□ 0.6
CPT1A-202ENST00000376618 KCNA4P22459 653 aa18.78■□□□□ 0.6
CPT1A-202ENST00000376618 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
CPT1A-202ENST00000376618 TNNT2P45379 298 aaPredicted RBP18.76■□□□□ 0.59
CPT1A-202ENST00000376618 TRAK1Q9UPV9 953 aa18.76■□□□□ 0.59
CPT1A-202ENST00000376618 KANK1Q14678 1352 aa18.75■□□□□ 0.59
CPT1A-202ENST00000376618 RTEL1-TNFRSF6BF6WH68 1400 aa18.75■□□□□ 0.59
CPT1A-202ENST00000376618 PPP2R1AP30153 589 aa18.74■□□□□ 0.59
CPT1A-202ENST00000376618 RCAN3Q9UKA8 241 aa18.74■□□□□ 0.59
CPT1A-202ENST00000376618 AMER1Q5JTC6 1135 aaPredicted RBP18.73■□□□□ 0.59
CPT1A-202ENST00000376618 ANP32EQ9BTT0 268 aa18.73■□□□□ 0.59
CPT1A-202ENST00000376618 MADDQ8WXG6 1647 aa18.73■□□□□ 0.59
CPT1A-202ENST00000376618 SAFB2Q14151 953 aaKnown RBP eCLIP18.72■□□□□ 0.59
CPT1A-202ENST00000376618 PTPRTO14522 1441 aa18.72■□□□□ 0.59
CPT1A-202ENST00000376618 RNF123Q5XPI4 1314 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms