RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 NUTM2GQ5VZR2 741 aa18.27■□□□□ 0.52
DDR1-225ENST00000376568 CHD1O14646 1710 aa18.27■□□□□ 0.52
DDR1-225ENST00000376568 IDI1Q13907 227 aa18.27■□□□□ 0.52
DDR1-225ENST00000376568 VGFO15240 615 aaPredicted RBP18.26■□□□□ 0.51
DDR1-225ENST00000376568 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
DDR1-225ENST00000376568 HSPA2P54652 639 aa18.26■□□□□ 0.51
DDR1-225ENST00000376568 NCOA1Q15788 1441 aa18.25■□□□□ 0.51
DDR1-225ENST00000376568 MYT1Q01538 1121 aa18.24■□□□□ 0.51
DDR1-225ENST00000376568 WDR7Q9Y4E6 1490 aa18.24■□□□□ 0.51
DDR1-225ENST00000376568 LTV1Q96GA3 475 aaPredicted RBP18.23■□□□□ 0.51
DDR1-225ENST00000376568 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
DDR1-225ENST00000376568 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
DDR1-225ENST00000376568 DNAJC5Q9H3Z4 198 aa18.22■□□□□ 0.51
DDR1-225ENST00000376568 CCDC141Q6ZP82 1450 aa18.21■□□□□ 0.51
DDR1-225ENST00000376568 ABCC2Q92887 1545 aa18.21■□□□□ 0.51
DDR1-225ENST00000376568 KIF14Q15058 1648 aa18.21■□□□□ 0.51
DDR1-225ENST00000376568 HFM1A2PYH4 1435 aa18.21■□□□□ 0.51
DDR1-225ENST00000376568 MAGI3Q5TCQ9 1506 aa18.21■□□□□ 0.51
DDR1-225ENST00000376568 PTPN23Q9H3S7 1636 aa18.21■□□□□ 0.5
DDR1-225ENST00000376568 CANXP27824 592 aaKnown RBP18.2■□□□□ 0.5
DDR1-225ENST00000376568 PLCH2O75038 1416 aa18.2■□□□□ 0.5
DDR1-225ENST00000376568 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
DDR1-225ENST00000376568 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
DDR1-225ENST00000376568 SYCP2Q9BX26 1530 aa18.19■□□□□ 0.5
DDR1-225ENST00000376568 PANK3Q9H999 370 aa18.18■□□□□ 0.5
DDR1-225ENST00000376568 PMFBP1Q8TBY8 1022 aa18.18■□□□□ 0.5
DDR1-225ENST00000376568 MORC1Q86VD1 984 aa18.18■□□□□ 0.5
DDR1-225ENST00000376568 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
DDR1-225ENST00000376568 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
DDR1-225ENST00000376568 WAPLQ7Z5K2 1190 aa18.17■□□□□ 0.5
DDR1-225ENST00000376568 TIMELESSQ9UNS1 1208 aa18.16■□□□□ 0.5
DDR1-225ENST00000376568 USP47Q96K76 1375 aa18.15■□□□□ 0.5
DDR1-225ENST00000376568 ACIN1Q9UKV3 1341 aaKnown RBP18.15■□□□□ 0.5
DDR1-225ENST00000376568 PRAM1Q96QH2 718 aa18.14■□□□□ 0.49
DDR1-225ENST00000376568 ADGRF5Q8IZF2 1346 aa18.13■□□□□ 0.49
DDR1-225ENST00000376568 ARXQ96QS3 562 aa18.13■□□□□ 0.49
DDR1-225ENST00000376568 CFAP65Q6ZU64 1925 aaKnown RBP18.11■□□□□ 0.49
DDR1-225ENST00000376568 SLC12A5Q9H2X9 1139 aa18.09■□□□□ 0.49
DDR1-225ENST00000376568 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
DDR1-225ENST00000376568 FKBP8Q14318 412 aa18.09■□□□□ 0.49
DDR1-225ENST00000376568 KIAA1107Q9UPP5 1409 aa18.08■□□□□ 0.49
DDR1-225ENST00000376568 PROSER2Q86WR7 435 aaPredicted RBP18.08■□□□□ 0.48
DDR1-225ENST00000376568 GGNBP2Q9H3C7 697 aa18.07■□□□□ 0.48
DDR1-225ENST00000376568 HDGFL2Q7Z4V5 671 aaPredicted RBP18.07■□□□□ 0.48
DDR1-225ENST00000376568 TSPOAP1O95153 1857 aa18.06■□□□□ 0.48
DDR1-225ENST00000376568 THEMISQ8N1K5 641 aaPredicted RBP18.06■□□□□ 0.48
DDR1-225ENST00000376568 DHX29Q7Z478 1369 aaKnown RBP18.06■□□□□ 0.48
DDR1-225ENST00000376568 ERBINQ96RT1 1412 aa18.05■□□□□ 0.48
DDR1-225ENST00000376568 C11orf95C9JLR9 678 aaPredicted RBP18.05■□□□□ 0.48
DDR1-225ENST00000376568 CCDC9Q9Y3X0 531 aaKnown RBP18.04■□□□□ 0.48
DDR1-225ENST00000376568 PIP4K2BP78356 416 aa18.04■□□□□ 0.48
DDR1-225ENST00000376568 YEATS2Q9ULM3 1422 aa18.04■□□□□ 0.48
DDR1-225ENST00000376568 CENPJQ9HC77 1338 aaPredicted RBP18.04■□□□□ 0.48
DDR1-225ENST00000376568 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
DDR1-225ENST00000376568 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDR1-225ENST00000376568 RRP7AQ9Y3A4 280 aaKnown RBP18.04■□□□□ 0.48
DDR1-225ENST00000376568 SLC52A1Q9NWF4 448 aa18.03■□□□□ 0.48
DDR1-225ENST00000376568 CSB-PGBD3P0DP91 1061 aa18.03■□□□□ 0.48
DDR1-225ENST00000376568 SAMD9Q5K651 1589 aa18.03■□□□□ 0.48
DDR1-225ENST00000376568 KIF7Q2M1P5 1343 aa18.02■□□□□ 0.48
DDR1-225ENST00000376568 CFAP53Q96M91 514 aa18.01■□□□□ 0.47
DDR1-225ENST00000376568 ANKLE2Q86XL3 938 aa18.01■□□□□ 0.47
DDR1-225ENST00000376568 WASHC2AQ641Q2 1341 aa18.01■□□□□ 0.47
DDR1-225ENST00000376568 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
DDR1-225ENST00000376568 WDR97A6NE52 1622 aa18■□□□□ 0.47
DDR1-225ENST00000376568 ANKRD30BQ9BXX2 1392 aa18■□□□□ 0.47
DDR1-225ENST00000376568 USP35Q9P2H5 1018 aa18■□□□□ 0.47
DDR1-225ENST00000376568 ROCK1Q13464 1354 aa17.99■□□□□ 0.47
DDR1-225ENST00000376568 MAP3K1Q13233 1512 aa17.98■□□□□ 0.47
DDR1-225ENST00000376568 PSME1Q06323 249 aa17.98■□□□□ 0.47
DDR1-225ENST00000376568 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
DDR1-225ENST00000376568 FBLN1P23142 703 aa17.98■□□□□ 0.47
DDR1-225ENST00000376568 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
DDR1-225ENST00000376568 A2MP01023 1474 aa17.96■□□□□ 0.47
DDR1-225ENST00000376568 EVC2Q86UK5 1308 aa17.96■□□□□ 0.46
DDR1-225ENST00000376568 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.95■□□□□ 0.46
DDR1-225ENST00000376568 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.95■□□□□ 0.466e-7■■■■□ 21.9
DDR1-225ENST00000376568 SUPT16HQ9Y5B9 1047 aaKnown RBP17.95■□□□□ 0.46
DDR1-225ENST00000376568 AMPHP49418 695 aa17.94■□□□□ 0.46
DDR1-225ENST00000376568 ATF3P18847 181 aa17.94■□□□□ 0.46
DDR1-225ENST00000376568 KDM5BQ9UGL1 1544 aa17.94■□□□□ 0.46
DDR1-225ENST00000376568 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.94■□□□□ 0.46
DDR1-225ENST00000376568 MAPK8IP3Q9UPT6 1336 aa17.93■□□□□ 0.46
DDR1-225ENST00000376568 POGZQ7Z3K3 1410 aa17.93■□□□□ 0.46
DDR1-225ENST00000376568 CDK19Q9BWU1 502 aa17.93■□□□□ 0.46
DDR1-225ENST00000376568 ZNF518AQ6AHZ1 1483 aa17.92■□□□□ 0.46
DDR1-225ENST00000376568 NCKAP5LQ9HCH0 1330 aa17.92■□□□□ 0.46
DDR1-225ENST00000376568 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
DDR1-225ENST00000376568 ABCA8O94911 1581 aa17.92■□□□□ 0.46
DDR1-225ENST00000376568 NUDCQ9Y266 331 aa17.91■□□□□ 0.46
DDR1-225ENST00000376568 EIF3AQ14152 1382 aaKnown RBP17.91■□□□□ 0.46
DDR1-225ENST00000376568 FRAT1Q92837 279 aaPredicted RBP17.91■□□□□ 0.46
DDR1-225ENST00000376568 FOXO3O43524 673 aa17.9■□□□□ 0.46
DDR1-225ENST00000376568 CCDC184Q52MB2 194 aa17.9■□□□□ 0.46
DDR1-225ENST00000376568 NLRP6P59044 892 aa17.9■□□□□ 0.46
DDR1-225ENST00000376568 KTN1Q86UP2 1357 aaKnown RBP17.9■□□□□ 0.46
DDR1-225ENST00000376568 NOS1P29475 1434 aa17.9■□□□□ 0.46
DDR1-225ENST00000376568 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
DDR1-225ENST00000376568 NUTM2BA6NNL0 878 aaPredicted RBP17.89■□□□□ 0.45
DDR1-225ENST00000376568 NUTM2EB1AL46 878 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms