RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 DUOX2Q9NRD8 1548 aa23.71■■□□□ 1.39
APOA1-205ENST00000375329 FAM50AQ14320 339 aaKnown RBP23.71■■□□□ 1.39
APOA1-205ENST00000375329 EIF2AK4Q9P2K8 1649 aaKnown RBP23.7■■□□□ 1.38
APOA1-205ENST00000375329 KIF15Q9NS87 1388 aa23.69■■□□□ 1.38
APOA1-205ENST00000375329 WASHC2CQ9Y4E1 1318 aa23.69■■□□□ 1.38
APOA1-205ENST00000375329 ANKRD30AQ9BXX3 1397 aa23.68■■□□□ 1.38
APOA1-205ENST00000375329 HSPA2P54652 639 aa23.68■■□□□ 1.38
APOA1-205ENST00000375329 KDM5DQ9BY66 1539 aa23.67■■□□□ 1.38
APOA1-205ENST00000375329 RRP7BPQ9NSQ0 103 aa23.66■■□□□ 1.38
APOA1-205ENST00000375329 RNF17Q9BXT8 1623 aaKnown RBP23.65■■□□□ 1.38
APOA1-205ENST00000375329 ERBINQ96RT1 1412 aa23.64■■□□□ 1.37
APOA1-205ENST00000375329 CHIC2Q9UKJ5 165 aa23.63■■□□□ 1.37
APOA1-205ENST00000375329 PTPRKQ15262 1439 aa23.62■■□□□ 1.37
APOA1-205ENST00000375329 NCOA1Q15788 1441 aa23.6■■□□□ 1.37
APOA1-205ENST00000375329 ADGRL2O95490 1459 aa23.59■■□□□ 1.37
APOA1-205ENST00000375329 ZC3H13Q5T200 1668 aaKnown RBP23.59■■□□□ 1.37
APOA1-205ENST00000375329 PZPP20742 1482 aa23.58■■□□□ 1.37
APOA1-205ENST00000375329 PPARGC1BQ86YN6 1023 aaKnown RBP23.58■■□□□ 1.37
APOA1-205ENST00000375329 DMRT2Q9Y5R5 561 aa23.58■■□□□ 1.37
APOA1-205ENST00000375329 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.57■■□□□ 1.36
APOA1-205ENST00000375329 KANK1Q14678 1352 aa23.55■■□□□ 1.36
APOA1-205ENST00000375329 ABCC3O15438 1527 aa23.54■■□□□ 1.36
APOA1-205ENST00000375329 TNRQ92752 1358 aa23.52■■□□□ 1.36
APOA1-205ENST00000375329 MYO3AQ8NEV4 1616 aa23.52■■□□□ 1.36
APOA1-205ENST00000375329 MROH1Q8NDA8 1641 aa23.51■■□□□ 1.35
APOA1-205ENST00000375329 PRDM15P57071 1507 aaPredicted RBP23.51■■□□□ 1.35
APOA1-205ENST00000375329 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
APOA1-205ENST00000375329 FBXO31Q5XUX0 539 aaPredicted RBP23.5■■□□□ 1.35
APOA1-205ENST00000375329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.5■■□□□ 1.35
APOA1-205ENST00000375329 CEP170BQ9Y4F5 1589 aaPredicted RBP23.49■■□□□ 1.35
APOA1-205ENST00000375329 DEPDC5O75140 1603 aa23.49■■□□□ 1.35
APOA1-205ENST00000375329 ROCK1Q13464 1354 aa23.49■■□□□ 1.35
APOA1-205ENST00000375329 ANKRD50Q9ULJ7 1429 aa23.48■■□□□ 1.35
APOA1-205ENST00000375329 A2ML1A8K2U0 1454 aa23.48■■□□□ 1.35
APOA1-205ENST00000375329 CEP152O94986 1710 aa23.47■■□□□ 1.35
APOA1-205ENST00000375329 STRCQ7RTU9 1775 aa23.47■■□□□ 1.35
APOA1-205ENST00000375329 CAMSAP1Q5T5Y3 1602 aa23.46■■□□□ 1.35
APOA1-205ENST00000375329 NLRP1Q9C000 1473 aa23.45■■□□□ 1.34
APOA1-205ENST00000375329 ARHGAP31Q2M1Z3 1444 aa23.44■■□□□ 1.34
APOA1-205ENST00000375329 CFAP65Q6ZU64 1925 aaKnown RBP23.44■■□□□ 1.34
APOA1-205ENST00000375329 ITGAEP38570 1179 aa23.44■■□□□ 1.34
APOA1-205ENST00000375329 PLA2R1Q13018 1463 aa23.43■■□□□ 1.34
APOA1-205ENST00000375329 PTPRTO14522 1441 aa23.43■■□□□ 1.34
APOA1-205ENST00000375329 RRBP1Q9P2E9 1410 aaKnown RBP23.43■■□□□ 1.34
APOA1-205ENST00000375329 PKD2Q13563 968 aa23.43■■□□□ 1.34
APOA1-205ENST00000375329 SPATA31D1Q6ZQQ2 1576 aa23.41■■□□□ 1.34
APOA1-205ENST00000375329 ERVK-7P63135 1459 aa23.41■■□□□ 1.34
APOA1-205ENST00000375329 LMTK2Q8IWU2 1503 aa23.4■■□□□ 1.34
APOA1-205ENST00000375329 THEMISQ8N1K5 641 aaPredicted RBP23.4■■□□□ 1.34
APOA1-205ENST00000375329 VWDEQ8N2E2 1590 aa23.39■■□□□ 1.33
APOA1-205ENST00000375329 CERKQ8TCT0 537 aa23.36■■□□□ 1.33
APOA1-205ENST00000375329 UGGT1Q9NYU2 1555 aa23.35■■□□□ 1.33
APOA1-205ENST00000375329 NCKAP5LQ9HCH0 1330 aa23.34■■□□□ 1.33
APOA1-205ENST00000375329 ANKLE2Q86XL3 938 aa23.32■■□□□ 1.32
APOA1-205ENST00000375329 EFCAB6Q5THR3 1501 aa23.31■■□□□ 1.32
APOA1-205ENST00000375329 UNC13BO14795 1591 aa23.31■■□□□ 1.32
APOA1-205ENST00000375329 RPRD2Q5VT52 1461 aaKnown RBP23.3■■□□□ 1.32
APOA1-205ENST00000375329 TET3O43151 1660 aa23.28■■□□□ 1.32
APOA1-205ENST00000375329 POLR1AO95602 1720 aaPredicted RBP23.28■■□□□ 1.32
APOA1-205ENST00000375329 SLC52A1Q9NWF4 448 aa23.25■■□□□ 1.31
APOA1-205ENST00000375329 STAG3Q9UJ98 1225 aa23.25■■□□□ 1.31
APOA1-205ENST00000375329 GCC2Q8IWJ2 1684 aa23.25■■□□□ 1.31
APOA1-205ENST00000375329 NUP155O75694 1391 aa23.25■■□□□ 1.31
APOA1-205ENST00000375329 NOS1P29475 1434 aa23.24■■□□□ 1.31
APOA1-205ENST00000375329 UBR1Q8IWV7 1749 aa23.23■■□□□ 1.31
APOA1-205ENST00000375329 IQGAP3Q86VI3 1631 aa23.22■■□□□ 1.31
APOA1-205ENST00000375329 DISP3Q9P2K9 1392 aa23.22■■□□□ 1.31
APOA1-205ENST00000375329 KDM5AP29375 1690 aaKnown RBP23.2■■□□□ 1.3
APOA1-205ENST00000375329 IDI1Q13907 227 aa23.2■■□□□ 1.3
APOA1-205ENST00000375329 EID1Q9Y6B2 187 aa23.19■■□□□ 1.3
APOA1-205ENST00000375329 MED14O60244 1454 aa23.18■■□□□ 1.3
APOA1-205ENST00000375329 NAIPQ13075 1403 aa23.18■■□□□ 1.3
APOA1-205ENST00000375329 PIK3C2BO00750 1634 aa23.18■■□□□ 1.3
APOA1-205ENST00000375329 SYNMO15061 1565 aa23.18■■□□□ 1.3
APOA1-205ENST00000375329 NEURL4Q96JN8 1562 aa23.18■■□□□ 1.3
APOA1-205ENST00000375329 HFM1A2PYH4 1435 aa23.17■■□□□ 1.3
APOA1-205ENST00000375329 NPHP4O75161 1426 aaPredicted RBP23.17■■□□□ 1.3
APOA1-205ENST00000375329 SLIT1O75093 1534 aa23.15■■□□□ 1.3
APOA1-205ENST00000375329 TXNDC2Q86VQ3 553 aa23.15■■□□□ 1.3
APOA1-205ENST00000375329 LTBP4Q8N2S1 1624 aa23.15■■□□□ 1.3
APOA1-205ENST00000375329 E9PCH4 1651 aa23.14■■□□□ 1.29
APOA1-205ENST00000375329 SCAF11Q99590 1463 aaKnown RBP23.14■■□□□ 1.29
APOA1-205ENST00000375329 ARHGAP23Q9P227 1491 aa23.14■■□□□ 1.29
APOA1-205ENST00000375329 ZNF335Q9H4Z2 1342 aaPredicted RBP23.13■■□□□ 1.29
APOA1-205ENST00000375329 TMEM2Q9UHN6 1383 aa23.13■■□□□ 1.29
APOA1-205ENST00000375329 IQSEC2Q5JU85 1478 aa23.12■■□□□ 1.29
APOA1-205ENST00000375329 IQGAP1P46940 1657 aa23.12■■□□□ 1.29
APOA1-205ENST00000375329 HDGFP51858 240 aaKnown RBP23.11■■□□□ 1.29
APOA1-205ENST00000375329 ADGRB3O60242 1522 aa23.11■■□□□ 1.29
APOA1-205ENST00000375329 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
APOA1-205ENST00000375329 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.29
APOA1-205ENST00000375329 LTKP29376 864 aa23.08■■□□□ 1.29
APOA1-205ENST00000375329 CPS1P31327 1500 aa23.05■■□□□ 1.28
APOA1-205ENST00000375329 CHGAP10645 457 aaKnown RBP23.04■■□□□ 1.28
APOA1-205ENST00000375329 ILDR2Q71H61 639 aa23.04■■□□□ 1.28
APOA1-205ENST00000375329 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
APOA1-205ENST00000375329 TMEM131LA2VDJ0 1609 aa23.01■■□□□ 1.27
APOA1-205ENST00000375329 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.01■■□□□ 1.27
APOA1-205ENST00000375329 MYO5BQ9ULV0 1848 aa23.01■■□□□ 1.27
APOA1-205ENST00000375329 SLC4A1APQ9BWU0 796 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms