RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
PTCH1-203ENST00000375274 RRBP1Q9P2E9 1410 aaKnown RBP14.49□□□□□ -0.09
PTCH1-203ENST00000375274 E9PSI1 815 aa14.49□□□□□ -0.09
PTCH1-203ENST00000375274 RRP7AQ9Y3A4 280 aaKnown RBP14.49□□□□□ -0.09
PTCH1-203ENST00000375274 NRDCO43847 1150 aa14.49□□□□□ -0.09
PTCH1-203ENST00000375274 APAF1O14727 1248 aa14.48□□□□□ -0.09
PTCH1-203ENST00000375274 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
PTCH1-203ENST00000375274 MYOM3Q5VTT5 1437 aa14.48□□□□□ -0.09
PTCH1-203ENST00000375274 SPAG9O60271 1321 aaKnown RBP14.48□□□□□ -0.09
PTCH1-203ENST00000375274 COG6Q9Y2V7 657 aa14.47□□□□□ -0.09
PTCH1-203ENST00000375274 GOLGA6L6A8MZA4 724 aa14.47□□□□□ -0.09
PTCH1-203ENST00000375274 TERF2IPQ9NYB0 399 aa14.47□□□□□ -0.09
PTCH1-203ENST00000375274 ARAP1Q96P48 1450 aa14.47□□□□□ -0.09
PTCH1-203ENST00000375274 HDGFP51858 240 aaKnown RBP14.47□□□□□ -0.09
PTCH1-203ENST00000375274 NAP1L2Q9ULW6 460 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-203ENST00000375274 KIAA1211Q6ZU35 1233 aa14.46□□□□□ -0.09
PTCH1-203ENST00000375274 TRAK1Q9UPV9 953 aa14.46□□□□□ -0.1
PTCH1-203ENST00000375274 CDK11BP21127 795 aaKnown RBP14.45□□□□□ -0.1
PTCH1-203ENST00000375274 KIAA2012Q0VF49 1180 aa14.45□□□□□ -0.1
PTCH1-203ENST00000375274 FANCD2Q9BXW9 1451 aa14.45□□□□□ -0.1
PTCH1-203ENST00000375274 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
PTCH1-203ENST00000375274 FOXD4L1Q9NU39 408 aa14.44□□□□□ -0.1
PTCH1-203ENST00000375274 NCAPD3P42695 1498 aa14.44□□□□□ -0.1
PTCH1-203ENST00000375274 MLECQ14165 292 aa14.44□□□□□ -0.1
PTCH1-203ENST00000375274 FGD5Q6ZNL6 1462 aa14.43□□□□□ -0.1
PTCH1-203ENST00000375274 SYAP1Q96A49 352 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-203ENST00000375274 DRC7Q8IY82 874 aa14.43□□□□□ -0.1
PTCH1-203ENST00000375274 ZNF644Q9H582 1327 aaPredicted RBP14.43□□□□□ -0.1
PTCH1-203ENST00000375274 DDX11L8A8MPP1 907 aa14.42□□□□□ -0.1
PTCH1-203ENST00000375274 ZKSCAN2Q63HK3 967 aa14.42□□□□□ -0.1
PTCH1-203ENST00000375274 HMMRO75330 724 aa14.42□□□□□ -0.1
PTCH1-203ENST00000375274 NGEFQ8N5V2 710 aa14.41□□□□□ -0.1
PTCH1-203ENST00000375274 STK31Q9BXU1 1019 aa14.4□□□□□ -0.1
PTCH1-203ENST00000375274 ERICH3Q5RHP9 1530 aa14.39□□□□□ -0.11
PTCH1-203ENST00000375274 NUTM2DQ5VT03 806 aaPredicted RBP14.39□□□□□ -0.11
PTCH1-203ENST00000375274 RSPH6AQ9H0K4 717 aa14.39□□□□□ -0.11
PTCH1-203ENST00000375274 CUX1P39880 1505 aa14.38□□□□□ -0.11
PTCH1-203ENST00000375274 ST18O60284 1047 aa14.38□□□□□ -0.11
PTCH1-203ENST00000375274 LMOD3Q0VAK6 560 aa14.38□□□□□ -0.11
PTCH1-203ENST00000375274 CASKIN1Q8WXD9 1431 aa14.38□□□□□ -0.11
PTCH1-203ENST00000375274 BRD4O60885 1362 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-203ENST00000375274 TRIM6-TRIM34B2RNG4 842 aa14.38□□□□□ -0.11
PTCH1-203ENST00000375274 SLC4A10Q6U841 1118 aa14.37□□□□□ -0.11
PTCH1-203ENST00000375274 ANKRD45Q5TZF3 282 aa14.37□□□□□ -0.11
PTCH1-203ENST00000375274 DDX49Q9Y6V7 483 aaKnown RBP14.37□□□□□ -0.11
PTCH1-203ENST00000375274 NCOA2Q15596 1464 aa14.37□□□□□ -0.11
PTCH1-203ENST00000375274 WASHC2CQ9Y4E1 1318 aa14.37□□□□□ -0.11
PTCH1-203ENST00000375274 ELL2O00472 640 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-203ENST00000375274 NFKBIBQ15653 356 aa14.36□□□□□ -0.11
PTCH1-203ENST00000375274 ARID3AQ99856 593 aa14.36□□□□□ -0.11
PTCH1-203ENST00000375274 HMGXB3Q12766 1538 aa14.36□□□□□ -0.11
PTCH1-203ENST00000375274 RAD54L2Q9Y4B4 1467 aa14.35□□□□□ -0.11
PTCH1-203ENST00000375274 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
PTCH1-203ENST00000375274 GAPVD1Q14C86 1478 aa14.35□□□□□ -0.11
PTCH1-203ENST00000375274 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
PTCH1-203ENST00000375274 NOL8Q76FK4 1167 aaKnown RBP14.34□□□□□ -0.11
PTCH1-203ENST00000375274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.34□□□□□ -0.11
PTCH1-203ENST00000375274 PRXQ9BXM0 1461 aa14.34□□□□□ -0.11
PTCH1-203ENST00000375274 CHMP4AQ9BY43 222 aa14.34□□□□□ -0.11
PTCH1-203ENST00000375274 DDX19BQ9UMR2 479 aa14.34□□□□□ -0.11
PTCH1-203ENST00000375274 SKOR2Q2VWA4 1001 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-203ENST00000375274 MIA2Q96PC5 1412 aa14.34□□□□□ -0.11
PTCH1-203ENST00000375274 CHMP5Q9NZZ3 219 aa14.33□□□□□ -0.11
PTCH1-203ENST00000375274 DZIP1LQ8IYY4 767 aaKnown RBP14.33□□□□□ -0.12
PTCH1-203ENST00000375274 FYCO1Q9BQS8 1478 aa14.33□□□□□ -0.12
PTCH1-203ENST00000375274 ADAMTS8Q9UP79 889 aa14.33□□□□□ -0.12
PTCH1-203ENST00000375274 ANKRD50Q9ULJ7 1429 aa14.33□□□□□ -0.12
PTCH1-203ENST00000375274 HSP90AA2PQ14568 343 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-203ENST00000375274 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-203ENST00000375274 NBPF8Q3BBV2 869 aa14.32□□□□□ -0.12
PTCH1-203ENST00000375274 CCDC184Q52MB2 194 aa14.32□□□□□ -0.12
PTCH1-203ENST00000375274 HTATSF1O43719 755 aaKnown RBP14.31□□□□□ -0.12
PTCH1-203ENST00000375274 PTPRGP23470 1445 aa14.31□□□□□ -0.12
PTCH1-203ENST00000375274 EVC2Q86UK5 1308 aa14.31□□□□□ -0.12
PTCH1-203ENST00000375274 FOXD4L5Q5VV16 416 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-203ENST00000375274 FOXD4L4Q8WXT5 416 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-203ENST00000375274 AKNAQ7Z591 1439 aa14.31□□□□□ -0.12
PTCH1-203ENST00000375274 PNISRQ8TF01 805 aaKnown RBP14.3□□□□□ -0.12
PTCH1-203ENST00000375274 RUNDC1Q96C34 613 aa14.29□□□□□ -0.12
PTCH1-203ENST00000375274 VGFO15240 615 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-203ENST00000375274 PHF14O94880 888 aa14.29□□□□□ -0.12
PTCH1-203ENST00000375274 PANK1Q8TE04 598 aa14.29□□□□□ -0.12
PTCH1-203ENST00000375274 HDAC5Q9UQL6 1122 aa14.29□□□□□ -0.12
PTCH1-203ENST00000375274 WDR97A6NE52 1622 aa14.28□□□□□ -0.12
PTCH1-203ENST00000375274 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
PTCH1-203ENST00000375274 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
PTCH1-203ENST00000375274 CSPP1Q1MSJ5 1256 aa14.28□□□□□ -0.12
PTCH1-203ENST00000375274 STAC3Q96MF2 364 aa14.28□□□□□ -0.12
PTCH1-203ENST00000375274 CFTRP13569 1480 aa14.28□□□□□ -0.12
PTCH1-203ENST00000375274 AAMPQ13685 434 aa14.27□□□□□ -0.12
PTCH1-203ENST00000375274 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.13
PTCH1-203ENST00000375274 GPATCH3Q96I76 525 aa14.27□□□□□ -0.13
PTCH1-203ENST00000375274 BACH2Q9BYV9 841 aa14.26□□□□□ -0.13
PTCH1-203ENST00000375274 GNL2Q13823 731 aaKnown RBP14.26□□□□□ -0.13
PTCH1-203ENST00000375274 C22orf23Q9BZE7 217 aa14.26□□□□□ -0.13
PTCH1-203ENST00000375274 RIPK4P57078 832 aa14.26□□□□□ -0.13
PTCH1-203ENST00000375274 RILPL2Q969X0 211 aa14.25□□□□□ -0.13
PTCH1-203ENST00000375274 LNPKQ9C0E8 428 aa14.25□□□□□ -0.13
PTCH1-203ENST00000375274 DIAPH1O60610 1272 aaKnown RBP14.24□□□□□ -0.13
PTCH1-203ENST00000375274 KIF16BQ96L93 1317 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms